RNA–Protein interactions for RNA: ENST00000486889.1

CTPS1-210, Transcript of CTP synthase 1, humanhuman

TSL 2

Gene CTPS1, Length 568 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-210ENST00000486889 NGLY1Q96IV0 654 aa13.05□□□□□ -0.32
CTPS1-210ENST00000486889 PNNQ9H307 717 aaKnown RBP13.05□□□□□ -0.32
CTPS1-210ENST00000486889 AFF2P51816 1311 aa13.05□□□□□ -0.32
CTPS1-210ENST00000486889 BLMP54132 1417 aaPredicted RBP13.05□□□□□ -0.32
CTPS1-210ENST00000486889 ABCC6O95255 1503 aa13.04□□□□□ -0.32
CTPS1-210ENST00000486889 PHRF1Q9P1Y6 1649 aaKnown RBP13.04□□□□□ -0.32
CTPS1-210ENST00000486889 RRS1Q15050 365 aaKnown RBP13.04□□□□□ -0.32
CTPS1-210ENST00000486889 IP6K1Q92551 441 aa13.04□□□□□ -0.32
CTPS1-210ENST00000486889 POLKQ9UBT6 870 aa13.04□□□□□ -0.32
CTPS1-210ENST00000486889 KIAA0232Q92628 1395 aa13.04□□□□□ -0.32
CTPS1-210ENST00000486889 WDR43Q15061 677 aaKnown RBP eCLIP13.03□□□□□ -0.32
CTPS1-210ENST00000486889 MAP3K19Q56UN5 1328 aa13.03□□□□□ -0.32
CTPS1-210ENST00000486889 CCER2I3L3R5 266 aa13.02□□□□□ -0.33
CTPS1-210ENST00000486889 DIAPH1O60610 1272 aaKnown RBP13.02□□□□□ -0.33
CTPS1-210ENST00000486889 HOXC9P31274 260 aa13.02□□□□□ -0.33
CTPS1-210ENST00000486889 QTRT2Q9H974 415 aaKnown RBP13.02□□□□□ -0.33
CTPS1-210ENST00000486889 MRS2Q9HD23 443 aa13.01□□□□□ -0.33
CTPS1-210ENST00000486889 EMILIN1Q9Y6C2 1016 aa13.01□□□□□ -0.33
CTPS1-210ENST00000486889 INSRP06213 1382 aa13.01□□□□□ -0.33
CTPS1-210ENST00000486889 CDK12Q9NYV4 1490 aaPredicted RBP13.01□□□□□ -0.33
CTPS1-210ENST00000486889 NFAT5O94916 1531 aa13.01□□□□□ -0.33
CTPS1-210ENST00000486889 COL14A1Q05707 1796 aaKnown RBP13.01□□□□□ -0.33
CTPS1-210ENST00000486889 MAP2P11137 1827 aaKnown RBP13.01□□□□□ -0.33
CTPS1-210ENST00000486889 BTG4Q9NY30 223 aa13□□□□□ -0.33
CTPS1-210ENST00000486889 LTN1O94822 1766 aa12.99□□□□□ -0.33
CTPS1-210ENST00000486889 FAM83GA6ND36 823 aa12.99□□□□□ -0.33
CTPS1-210ENST00000486889 CHRNA2Q15822 529 aa12.99□□□□□ -0.33
CTPS1-210ENST00000486889 CCDC9Q9Y3X0 531 aaKnown RBP12.99□□□□□ -0.33
CTPS1-210ENST00000486889 ABCA3Q99758 1704 aa12.99□□□□□ -0.33
CTPS1-210ENST00000486889 TOM1L2Q6ZVM7 507 aa12.98□□□□□ -0.33
CTPS1-210ENST00000486889 ANKRD24Q8TF21 1146 aa12.98□□□□□ -0.33
CTPS1-210ENST00000486889 LTV1Q96GA3 475 aaPredicted RBP12.98□□□□□ -0.33
CTPS1-210ENST00000486889 STRN4Q9NRL3 753 aa12.98□□□□□ -0.33
CTPS1-210ENST00000486889 USP21Q9UK80 565 aa12.98□□□□□ -0.33
CTPS1-210ENST00000486889 CRYBG1Q9Y4K1 1723 aa12.98□□□□□ -0.33
CTPS1-210ENST00000486889 MARF1Q9Y4F3 1742 aaKnown RBP12.97□□□□□ -0.33
CTPS1-210ENST00000486889 U2SURPO15042 1029 aaKnown RBP12.97□□□□□ -0.33
CTPS1-210ENST00000486889 UNC5CLQ8IV45 518 aa12.97□□□□□ -0.33
CTPS1-210ENST00000486889 NLRP2Q9NX02 1062 aa12.97□□□□□ -0.33
CTPS1-210ENST00000486889 WDR17Q8IZU2 1322 aa12.96□□□□□ -0.33
CTPS1-210ENST00000486889 RBM6P78332 1123 aaKnown RBP12.96□□□□□ -0.33
CTPS1-210ENST00000486889 HSP90AB2PQ58FF8 381 aa12.96□□□□□ -0.33
CTPS1-210ENST00000486889 FNBP4Q8N3X1 1017 aaPredicted RBP12.96□□□□□ -0.33
CTPS1-210ENST00000486889 TRPC5Q9UL62 973 aaPredicted RBP12.96□□□□□ -0.33
CTPS1-210ENST00000486889 ERBB3P21860 1342 aa12.95□□□□□ -0.34
CTPS1-210ENST00000486889 U2AF1L5P0DN76 240 aaPredicted RBP12.95□□□□□ -0.34
CTPS1-210ENST00000486889 FBLN1P23142 703 aa12.95□□□□□ -0.34
CTPS1-210ENST00000486889 U2AF1Q01081 240 aaKnown RBP eCLIP12.95□□□□□ -0.34
CTPS1-210ENST00000486889 RAPGEF4Q8WZA2 1011 aa12.95□□□□□ -0.34
CTPS1-210ENST00000486889 CDCA7Q9BWT1 371 aaPredicted RBP12.95□□□□□ -0.34
CTPS1-210ENST00000486889 THRAP3Q9Y2W1 955 aaKnown RBP12.95□□□□□ -0.34
CTPS1-210ENST00000486889 NWD2Q9ULI1 1742 aa12.95□□□□□ -0.34
CTPS1-210ENST00000486889 FAM208AQ9UK61 1670 aaKnown RBP12.94□□□□□ -0.34
CTPS1-210ENST00000486889 EIF4A2Q14240 407 aaKnown RBP12.94□□□□□ -0.34
CTPS1-210ENST00000486889 MIER1Q8N108 512 aa12.94□□□□□ -0.34
CTPS1-210ENST00000486889 UPF1Q92900 1129 aaKnown RBP eCLIP12.94□□□□□ -0.34
CTPS1-210ENST00000486889 MAPK8IP3Q9UPT6 1336 aa12.93□□□□□ -0.34
CTPS1-210ENST00000486889 CARD10Q9BWT7 1032 aa12.93□□□□□ -0.34
CTPS1-210ENST00000486889 AXIN2Q9Y2T1 843 aa12.93□□□□□ -0.34
CTPS1-210ENST00000486889 CRB1P82279 1406 aa12.93□□□□□ -0.34
CTPS1-210ENST00000486889 COL5A2P05997 1499 aaPredicted RBP12.92□□□□□ -0.34
CTPS1-210ENST00000486889 FCHSD2O94868 740 aa12.92□□□□□ -0.34
CTPS1-210ENST00000486889 IL13P35225 146 aa12.92□□□□□ -0.34
CTPS1-210ENST00000486889 VPS72Q15906 364 aa12.92□□□□□ -0.34
CTPS1-210ENST00000486889 SLIT2O94813 1529 aa12.92□□□□□ -0.34
CTPS1-210ENST00000486889 TATP17735 454 aaPredicted RBP12.91□□□□□ -0.34
CTPS1-210ENST00000486889 TCP11L2Q8N4U5 519 aa12.91□□□□□ -0.34
CTPS1-210ENST00000486889 PLCH1Q4KWH8 1693 aa12.91□□□□□ -0.34
CTPS1-210ENST00000486889 LMO7Q8WWI1 1683 aa12.9□□□□□ -0.34
CTPS1-210ENST00000486889 CAMTA1Q9Y6Y1 1673 aa12.9□□□□□ -0.34
CTPS1-210ENST00000486889 A0A0G2JS52 829 aa12.9□□□□□ -0.34
CTPS1-210ENST00000486889 MYT1Q01538 1121 aa12.9□□□□□ -0.34
CTPS1-210ENST00000486889 SULT6B1Q6IMI4 303 aa12.9□□□□□ -0.34
CTPS1-210ENST00000486889 USP35Q9P2H5 1018 aa12.9□□□□□ -0.34
CTPS1-210ENST00000486889 PLEKHG2Q9H7P9 1386 aa12.9□□□□□ -0.34
CTPS1-210ENST00000486889 AMOTQ4VCS5 1084 aa12.89□□□□□ -0.35
CTPS1-210ENST00000486889 LARP1Q6PKG0 1096 aaKnown RBP12.89□□□□□ -0.35
CTPS1-210ENST00000486889 FAM9BQ8IZU0 186 aa12.89□□□□□ -0.35
CTPS1-210ENST00000486889 EYA1Q99502 592 aa12.89□□□□□ -0.35
CTPS1-210ENST00000486889 SPG7Q9UQ90 795 aa12.89□□□□□ -0.35
CTPS1-210ENST00000486889 COL18A1P39060 1754 aa12.89□□□□□ -0.35
CTPS1-210ENST00000486889 IGSF1Q8N6C5 1336 aa12.88□□□□□ -0.35
CTPS1-210ENST00000486889 PEAK1Q9H792 1746 aa12.88□□□□□ -0.35
CTPS1-210ENST00000486889 IL2RBP14784 551 aa12.88□□□□□ -0.35
CTPS1-210ENST00000486889 PLEKHO1Q53GL0 409 aaPredicted RBP12.88□□□□□ -0.35
CTPS1-210ENST00000486889 GJD4Q96KN9 370 aaPredicted RBP12.88□□□□□ -0.35
CTPS1-210ENST00000486889 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.88□□□□□ -0.35
CTPS1-210ENST00000486889 RGS12O14924 1447 aa12.88□□□□□ -0.35
CTPS1-210ENST00000486889 SPATA31A5Q5VU36 1347 aa12.88□□□□□ -0.35
CTPS1-210ENST00000486889 SPATA31A7Q8IWB4 1347 aa12.88□□□□□ -0.35
CTPS1-210ENST00000486889 NBPF6Q5VWK0 638 aa12.87□□□□□ -0.35
CTPS1-210ENST00000486889 BARGINQ6ZT62 677 aa12.87□□□□□ -0.35
CTPS1-210ENST00000486889 NGEFQ8N5V2 710 aa12.87□□□□□ -0.35
CTPS1-210ENST00000486889 GAS2L2Q8NHY3 880 aa12.87□□□□□ -0.35
CTPS1-210ENST00000486889 PNISRQ8TF01 805 aaKnown RBP12.87□□□□□ -0.35
CTPS1-210ENST00000486889 NBPF4Q96M43 638 aa12.87□□□□□ -0.35
CTPS1-210ENST00000486889 SPATA31A1Q5TZJ5 1347 aa12.87□□□□□ -0.35
CTPS1-210ENST00000486889 BCL9LQ86UU0 1499 aa12.86□□□□□ -0.35
CTPS1-210ENST00000486889 EXOC5O00471 708 aa12.86□□□□□ -0.35
CTPS1-210ENST00000486889 HMOX1P09601 288 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms