RNA–Protein interactions for RNA: ENST00000483687.5

PCCB-216, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-216ENST00000483687 CPDO75976 1380 aa25.35■■□□□ 1.65
PCCB-216ENST00000483687 KIAA0232Q92628 1395 aa25.35■■□□□ 1.65
PCCB-216ENST00000483687 ADAMTS8Q9UP79 889 aa25.34■■□□□ 1.65
PCCB-216ENST00000483687 U2SURPO15042 1029 aaKnown RBP25.34■■□□□ 1.65
PCCB-216ENST00000483687 IL13P35225 146 aa25.33■■□□□ 1.65
PCCB-216ENST00000483687 EIF4A2Q14240 407 aaKnown RBP25.33■■□□□ 1.65
PCCB-216ENST00000483687 U2AF1L5P0DN76 240 aaPredicted RBP25.32■■□□□ 1.64
PCCB-216ENST00000483687 U2AF1Q01081 240 aaKnown RBP eCLIP25.32■■□□□ 1.64
PCCB-216ENST00000483687 RGPD5Q99666 1765 aa25.31■■□□□ 1.64
PCCB-216ENST00000483687 HSPA1LP34931 641 aa25.31■■□□□ 1.64
PCCB-216ENST00000483687 JCADQ9P266 1359 aa25.3■■□□□ 1.64
PCCB-216ENST00000483687 PRDM11Q9NQV5 511 aa25.3■■□□□ 1.64
PCCB-216ENST00000483687 COL18A1P39060 1754 aa25.3■■□□□ 1.64
PCCB-216ENST00000483687 BLMP54132 1417 aaPredicted RBP25.3■■□□□ 1.64
PCCB-216ENST00000483687 ABCC6O95255 1503 aa25.29■■□□□ 1.64
PCCB-216ENST00000483687 CHRNA2Q15822 529 aa25.29■■□□□ 1.64
PCCB-216ENST00000483687 LTV1Q96GA3 475 aaPredicted RBP25.29■■□□□ 1.64
PCCB-216ENST00000483687 AXIN2Q9Y2T1 843 aa25.28■■□□□ 1.64
PCCB-216ENST00000483687 RGPD1P0DJD0 1748 aa25.25■■□□□ 1.63
PCCB-216ENST00000483687 NUTM2BA6NNL0 878 aaPredicted RBP25.23■■□□□ 1.63
PCCB-216ENST00000483687 NUTM2EB1AL46 878 aaPredicted RBP25.23■■□□□ 1.63
PCCB-216ENST00000483687 NUTM2AQ8IVF1 878 aaPredicted RBP25.23■■□□□ 1.63
PCCB-216ENST00000483687 ANKRD24Q8TF21 1146 aa25.23■■□□□ 1.63
PCCB-216ENST00000483687 LMO7Q8WWI1 1683 aa25.23■■□□□ 1.63
PCCB-216ENST00000483687 HNRNPUQ00839 825 aaKnown RBP eCLIP25.23■■□□□ 1.63
PCCB-216ENST00000483687 CCDC146Q8IYE0 955 aa25.23■■□□□ 1.63
PCCB-216ENST00000483687 ERBB3P21860 1342 aa25.22■■□□□ 1.63
PCCB-216ENST00000483687 HMOX1P09601 288 aa25.22■■□□□ 1.63
PCCB-216ENST00000483687 FAM83GA6ND36 823 aa25.21■■□□□ 1.63
PCCB-216ENST00000483687 EYA1Q99502 592 aa25.21■■□□□ 1.63
PCCB-216ENST00000483687 RGPD2P0DJD1 1756 aa25.21■■□□□ 1.63
PCCB-216ENST00000483687 COL14A1Q05707 1796 aaKnown RBP25.21■■□□□ 1.63
PCCB-216ENST00000483687 ADAMTS2O95450 1211 aa25.2■■□□□ 1.63
PCCB-216ENST00000483687 FCHSD2O94868 740 aa25.2■■□□□ 1.62
PCCB-216ENST00000483687 CAMTA1Q9Y6Y1 1673 aa25.19■■□□□ 1.62
PCCB-216ENST00000483687 IGSF1Q8N6C5 1336 aa25.19■■□□□ 1.62
PCCB-216ENST00000483687 SULT6B1Q6IMI4 303 aa25.19■■□□□ 1.62
PCCB-216ENST00000483687 PNNQ9H307 717 aaKnown RBP25.19■■□□□ 1.62
PCCB-216ENST00000483687 SPATA31A6Q5VVP1 1343 aa25.19■■□□□ 1.62
PCCB-216ENST00000483687 RSPH6AQ9H0K4 717 aa25.18■■□□□ 1.62
PCCB-216ENST00000483687 RUNDC1Q96C34 613 aa25.17■■□□□ 1.62
PCCB-216ENST00000483687 FAM208AQ9UK61 1670 aaKnown RBP25.17■■□□□ 1.62
PCCB-216ENST00000483687 CSB-PGBD3P0DP91 1061 aa25.17■■□□□ 1.62
PCCB-216ENST00000483687 AEBP1Q8IUX7 1158 aa25.17■■□□□ 1.62
PCCB-216ENST00000483687 SENP3-EIF4A1A0A087X0R7 540 aa25.16■■□□□ 1.62
PCCB-216ENST00000483687 PRKAR2BP31323 418 aa25.16■■□□□ 1.62
PCCB-216ENST00000483687 NBPF6Q5VWK0 638 aa25.16■■□□□ 1.62
PCCB-216ENST00000483687 NBPF4Q96M43 638 aa25.16■■□□□ 1.62
PCCB-216ENST00000483687 COL5A2P05997 1499 aaPredicted RBP25.15■■□□□ 1.62
PCCB-216ENST00000483687 PLEKHF1Q96S99 279 aa25.15■■□□□ 1.62
PCCB-216ENST00000483687 MAPK8IP3Q9UPT6 1336 aa25.14■■□□□ 1.62
PCCB-216ENST00000483687 KDRP35968 1356 aa25.14■■□□□ 1.61
PCCB-216ENST00000483687 PLCH1Q4KWH8 1693 aa25.14■■□□□ 1.61
PCCB-216ENST00000483687 USHBP1Q8N6Y0 703 aa25.14■■□□□ 1.61
PCCB-216ENST00000483687 BTG4Q9NY30 223 aa25.14■■□□□ 1.61
PCCB-216ENST00000483687 NEFMP07197 916 aa25.13■■□□□ 1.61
PCCB-216ENST00000483687 APAF1O14727 1248 aa25.12■■□□□ 1.61
PCCB-216ENST00000483687 NLRP2Q9NX02 1062 aa25.12■■□□□ 1.61
PCCB-216ENST00000483687 EVA1CP58658 441 aa25.12■■□□□ 1.61
PCCB-216ENST00000483687 STRN4Q9NRL3 753 aa25.12■■□□□ 1.61
PCCB-216ENST00000483687 WDR17Q8IZU2 1322 aa25.11■■□□□ 1.61
PCCB-216ENST00000483687 LRP6O75581 1613 aa25.11■■□□□ 1.61
PCCB-216ENST00000483687 FBXO41Q8TF61 875 aa25.11■■□□□ 1.61
PCCB-216ENST00000483687 TCP11L2Q8N4U5 519 aa25.1■■□□□ 1.61
PCCB-216ENST00000483687 SALL2Q9Y467 1007 aaPredicted RBP25.1■■□□□ 1.61
PCCB-216ENST00000483687 NCAPD2Q15021 1401 aa25.09■■□□□ 1.61
PCCB-216ENST00000483687 TOM1L2Q6ZVM7 507 aa25.09■■□□□ 1.61
PCCB-216ENST00000483687 PHACTR3Q96KR7 559 aa25.07■■□□□ 1.6
PCCB-216ENST00000483687 C8orf37Q96NL8 207 aa25.07■■□□□ 1.6
PCCB-216ENST00000483687 ZBED9Q6R2W3 1325 aa25.07■■□□□ 1.6
PCCB-216ENST00000483687 NWD2Q9ULI1 1742 aa25.07■■□□□ 1.6
PCCB-216ENST00000483687 LARP1Q6PKG0 1096 aaKnown RBP25.06■■□□□ 1.6
PCCB-216ENST00000483687 NRAPQ86VF7 1730 aa25.05■■□□□ 1.6
PCCB-216ENST00000483687 NEUROD2Q15784 382 aa25.05■■□□□ 1.6
PCCB-216ENST00000483687 RRP7AQ9Y3A4 280 aaKnown RBP25.05■■□□□ 1.6
PCCB-216ENST00000483687 SLIT2O94813 1529 aa25.05■■□□□ 1.6
PCCB-216ENST00000483687 MEX3CQ5U5Q3 659 aaKnown RBP25.04■■□□□ 1.6
PCCB-216ENST00000483687 NGLY1Q96IV0 654 aa25.04■■□□□ 1.6
PCCB-216ENST00000483687 CRB1P82279 1406 aa25.03■■□□□ 1.6
PCCB-216ENST00000483687 TMPOP42166 694 aaKnown RBP25.03■■□□□ 1.6
PCCB-216ENST00000483687 NGEFQ8N5V2 710 aa25.02■■□□□ 1.6
PCCB-216ENST00000483687 CARD10Q9BWT7 1032 aa25.02■■□□□ 1.6
PCCB-216ENST00000483687 NFE2L2Q16236 605 aa25■■□□□ 1.59
PCCB-216ENST00000483687 RAPGEF4Q8WZA2 1011 aa25■■□□□ 1.59
PCCB-216ENST00000483687 DLG5Q8TDM6 1919 aa25■■□□□ 1.59
PCCB-216ENST00000483687 RIPK4P57078 832 aa24.99■■□□□ 1.59
PCCB-216ENST00000483687 USP35Q9P2H5 1018 aa24.98■■□□□ 1.59
PCCB-216ENST00000483687 MTHFSDQ2M296 383 aaKnown RBP24.98■■□□□ 1.59
PCCB-216ENST00000483687 FNBP4Q8N3X1 1017 aaPredicted RBP24.98■■□□□ 1.59
PCCB-216ENST00000483687 NCBP3Q53F19 620 aaKnown RBP24.97■■□□□ 1.59
PCCB-216ENST00000483687 UNC5CLQ8IV45 518 aa24.97■■□□□ 1.59
PCCB-216ENST00000483687 MEGF6O75095 1541 aa24.97■■□□□ 1.59
PCCB-216ENST00000483687 TATP17735 454 aaPredicted RBP24.96■■□□□ 1.59
PCCB-216ENST00000483687 GAS2L2Q8NHY3 880 aa24.96■■□□□ 1.59
PCCB-216ENST00000483687 BCL9LQ86UU0 1499 aa24.96■■□□□ 1.59
PCCB-216ENST00000483687 CCDC27Q2M243 656 aa24.95■■□□□ 1.59
PCCB-216ENST00000483687 PARP4Q9UKK3 1724 aaKnown RBP24.95■■□□□ 1.58
PCCB-216ENST00000483687 AMOTQ4VCS5 1084 aa24.95■■□□□ 1.58
PCCB-216ENST00000483687 WWC1Q8IX03 1113 aa24.95■■□□□ 1.58
PCCB-216ENST00000483687 PLEKHO1Q53GL0 409 aaPredicted RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms