RNA–Protein interactions for RNA: ENST00000482874.1

SLC22A23-208, Transcript of solute carrier family 22 member 23, human

TSL 3

Gene SLC22A23, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC22A23-208	ENST00000482874	BRWD3	Q6RI45	1802 aa		32.73	■■■□□ 2.83
SLC22A23-208	ENST00000482874	COG3	Q96JB2	828 aa		32.73	■■■□□ 2.83
SLC22A23-208	ENST00000482874	LARP1	Q6PKG0	1096 aa	Known RBP	32.72	■■■□□ 2.83
SLC22A23-208	ENST00000482874	EVA1C	P58658	441 aa		32.71	■■■□□ 2.83
SLC22A23-208	ENST00000482874	POLR3GL	Q9BT43	218 aa		32.71	■■■□□ 2.83
SLC22A23-208	ENST00000482874	KIF7	Q2M1P5	1343 aa		32.71	■■■□□ 2.83
SLC22A23-208	ENST00000482874	ZBTB7C	A1YPR0	619 aa		32.7	■■■□□ 2.83
SLC22A23-208	ENST00000482874	EP400	Q96L91	3159 aa		32.69	■■■□□ 2.82
SLC22A23-208	ENST00000482874	SEPT12	Q8IYM1	358 aa		32.69	■■■□□ 2.82
SLC22A23-208	ENST00000482874	GGNBP2	Q9H3C7	697 aa		32.69	■■■□□ 2.82
SLC22A23-208	ENST00000482874	CRB1	P82279	1406 aa		32.68	■■■□□ 2.82
SLC22A23-208	ENST00000482874	FAM98C	Q17RN3	349 aa	Known RBP	32.68	■■■□□ 2.82
SLC22A23-208	ENST00000482874	WDR17	Q8IZU2	1322 aa		32.65	■■■□□ 2.82
SLC22A23-208	ENST00000482874	BARGIN	Q6ZT62	677 aa		32.64	■■■□□ 2.82
SLC22A23-208	ENST00000482874	PANK3	Q9H999	370 aa		32.64	■■■□□ 2.82
SLC22A23-208	ENST00000482874	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.63	■■■□□ 2.81
SLC22A23-208	ENST00000482874	CGNL1	Q0VF96	1302 aa		32.62	■■■□□ 2.81
SLC22A23-208	ENST00000482874	THRAP3	Q9Y2W1	955 aa	Known RBP	32.62	■■■□□ 2.81
SLC22A23-208	ENST00000482874	ANKRD26	Q9UPS8	1709 aa		32.62	■■■□□ 2.81
SLC22A23-208	ENST00000482874	BLM	P54132	1417 aa	Predicted RBP	32.61	■■■□□ 2.81
SLC22A23-208	ENST00000482874	MAP3K19	Q56UN5	1328 aa		32.6	■■■□□ 2.81
SLC22A23-208	ENST00000482874	TCP11L2	Q8N4U5	519 aa		32.6	■■■□□ 2.81
SLC22A23-208	ENST00000482874	CCDC7	Q96M83	1385 aa		32.59	■■■□□ 2.81
SLC22A23-208	ENST00000482874	ERBB3	P21860	1342 aa		32.59	■■■□□ 2.81
SLC22A23-208	ENST00000482874	FBLN1	P23142	703 aa		32.59	■■■□□ 2.81
SLC22A23-208	ENST00000482874	IP6K1	Q92551	441 aa		32.59	■■■□□ 2.81
SLC22A23-208	ENST00000482874	WNK3	Q9BYP7	1800 aa		32.58	■■■□□ 2.81
SLC22A23-208	ENST00000482874	PARP4	Q9UKK3	1724 aa	Known RBP	32.57	■■■□□ 2.81
SLC22A23-208	ENST00000482874	USP35	Q9P2H5	1018 aa		32.57	■■■□□ 2.8
SLC22A23-208	ENST00000482874	RTL1	A6NKG5	1358 aa		32.57	■■■□□ 2.8
SLC22A23-208	ENST00000482874	WASHC2A	Q641Q2	1341 aa		32.56	■■■□□ 2.8
SLC22A23-208	ENST00000482874	TOM1L2	Q6ZVM7	507 aa		32.55	■■■□□ 2.8
SLC22A23-208	ENST00000482874	KRT27	Q7Z3Y8	459 aa		32.55	■■■□□ 2.8
SLC22A23-208	ENST00000482874	CARD10	Q9BWT7	1032 aa		32.55	■■■□□ 2.8
SLC22A23-208	ENST00000482874	FAM208A	Q9UK61	1670 aa	Known RBP	32.53	■■■□□ 2.8
SLC22A23-208	ENST00000482874	HOXC9	P31274	260 aa		32.53	■■■□□ 2.8
SLC22A23-208	ENST00000482874	PEAK1	Q9H792	1746 aa		32.53	■■■□□ 2.8
SLC22A23-208	ENST00000482874	NSD2	O96028	1365 aa		32.52	■■■□□ 2.8
SLC22A23-208	ENST00000482874	KIF24	Q5T7B8	1368 aa		32.52	■■■□□ 2.8
SLC22A23-208	ENST00000482874		A0A0G2JS52	829 aa		32.51	■■■□□ 2.79
SLC22A23-208	ENST00000482874	MYT1	Q01538	1121 aa		32.51	■■■□□ 2.79
SLC22A23-208	ENST00000482874	RRS1	Q15050	365 aa	Known RBP	32.51	■■■□□ 2.79
SLC22A23-208	ENST00000482874	ANKRD24	Q8TF21	1146 aa		32.51	■■■□□ 2.79
SLC22A23-208	ENST00000482874	DISP2	A7MBM2	1401 aa		32.51	■■■□□ 2.79
SLC22A23-208	ENST00000482874	LRRC37A3	O60309	1634 aa		32.49	■■■□□ 2.79
SLC22A23-208	ENST00000482874	CSB-PGBD3	P0DP91	1061 aa		32.48	■■■□□ 2.79
SLC22A23-208	ENST00000482874	AMPH	P49418	695 aa		32.47	■■■□□ 2.79
SLC22A23-208	ENST00000482874	PER1	O15534	1290 aa	Predicted RBP	32.46	■■■□□ 2.79
SLC22A23-208	ENST00000482874	AMER1	Q5JTC6	1135 aa	Predicted RBP	32.44	■■■□□ 2.78
SLC22A23-208	ENST00000482874	MAP2	P11137	1827 aa	Known RBP	32.44	■■■□□ 2.78
SLC22A23-208	ENST00000482874	INSR	P06213	1382 aa		32.44	■■■□□ 2.78
SLC22A23-208	ENST00000482874	FLT4	P35916	1363 aa		32.44	■■■□□ 2.78
SLC22A23-208	ENST00000482874	KNSTRN	Q9Y448	316 aa		32.43	■■■□□ 2.78
SLC22A23-208	ENST00000482874	CDCA7	Q9BWT1	371 aa	Predicted RBP	32.42	■■■□□ 2.78
SLC22A23-208	ENST00000482874	EMILIN1	Q9Y6C2	1016 aa		32.41	■■■□□ 2.78
SLC22A23-208	ENST00000482874	RGPD2	P0DJD1	1756 aa		32.4	■■■□□ 2.78
SLC22A23-208	ENST00000482874	CCDC125	Q86Z20	511 aa		32.4	■■■□□ 2.78
SLC22A23-208	ENST00000482874	NLRP2	Q9NX02	1062 aa		32.4	■■■□□ 2.78
SLC22A23-208	ENST00000482874	SMG6	Q86US8	1419 aa	Known RBP	32.38	■■■□□ 2.77
SLC22A23-208	ENST00000482874	HSP90AB2P	Q58FF8	381 aa		32.38	■■■□□ 2.77
SLC22A23-208	ENST00000482874	POLK	Q9UBT6	870 aa		32.38	■■■□□ 2.77
SLC22A23-208	ENST00000482874	FAM182B	Q5T319	152 aa		32.37	■■■□□ 2.77
SLC22A23-208	ENST00000482874	LTV1	Q96GA3	475 aa	Predicted RBP	32.36	■■■□□ 2.77
SLC22A23-208	ENST00000482874	PDE3B	Q13370	1112 aa		32.35	■■■□□ 2.77
SLC22A23-208	ENST00000482874	TNS2	Q63HR2	1409 aa		32.34	■■■□□ 2.77
SLC22A23-208	ENST00000482874	NPC1L1	Q9UHC9	1359 aa		32.34	■■■□□ 2.77
SLC22A23-208	ENST00000482874	DDB1	Q16531	1140 aa		32.34	■■■□□ 2.77
SLC22A23-208	ENST00000482874	RGPD1	P0DJD0	1748 aa		32.32	■■■□□ 2.76
SLC22A23-208	ENST00000482874	TNS1	Q9HBL0	1735 aa	Known RBP	32.31	■■■□□ 2.76
SLC22A23-208	ENST00000482874	IL2RB	P14784	551 aa		32.31	■■■□□ 2.76
SLC22A23-208	ENST00000482874	FAM196A	Q6ZSG2	479 aa		32.31	■■■□□ 2.76
SLC22A23-208	ENST00000482874	MORC1	Q86VD1	984 aa		32.31	■■■□□ 2.76
SLC22A23-208	ENST00000482874	TNNT2	P45379	298 aa	Predicted RBP	32.3	■■■□□ 2.76
SLC22A23-208	ENST00000482874	NCAPD2	Q15021	1401 aa		32.3	■■■□□ 2.76
SLC22A23-208	ENST00000482874	OVOS2	A0A0G2JMS6	1433 aa		32.29	■■■□□ 2.76
SLC22A23-208	ENST00000482874	BCL9	O00512	1426 aa		32.29	■■■□□ 2.76
SLC22A23-208	ENST00000482874	NBPF6	Q5VWK0	638 aa		32.29	■■■□□ 2.76
SLC22A23-208	ENST00000482874	NBPF4	Q96M43	638 aa		32.29	■■■□□ 2.76
SLC22A23-208	ENST00000482874	ZEB1	P37275	1124 aa	Predicted RBP	32.27	■■■□□ 2.76
SLC22A23-208	ENST00000482874	MARCH10	Q8NA82	808 aa	Predicted RBP	32.26	■■■□□ 2.75
SLC22A23-208	ENST00000482874	EXOC5	O00471	708 aa		32.25	■■■□□ 2.75
SLC22A23-208	ENST00000482874	PPM1G	O15355	546 aa	Predicted RBP	32.25	■■■□□ 2.75
SLC22A23-208	ENST00000482874	SBF2	Q86WG5	1849 aa		32.24	■■■□□ 2.75
SLC22A23-208	ENST00000482874	MEGF6	O75095	1541 aa		32.24	■■■□□ 2.75
SLC22A23-208	ENST00000482874	SHANK3	Q9BYB0	1731 aa		32.22	■■■□□ 2.75
SLC22A23-208	ENST00000482874	CC2D1B	Q5T0F9	858 aa	Known RBP	32.19	■■■□□ 2.74
SLC22A23-208	ENST00000482874	USHBP1	Q8N6Y0	703 aa		32.19	■■■□□ 2.74
SLC22A23-208	ENST00000482874	TRIM37	O94972	964 aa		32.18	■■■□□ 2.74
SLC22A23-208	ENST00000482874	SF3B2	Q13435	895 aa	Known RBP	32.18	■■■□□ 2.74
SLC22A23-208	ENST00000482874	EIF4A2	Q14240	407 aa	Known RBP	32.18	■■■□□ 2.74
SLC22A23-208	ENST00000482874	DEFB132	Q7Z7B7	95 aa		32.17	■■■□□ 2.74
SLC22A23-208	ENST00000482874	EYA1	Q99502	592 aa		32.15	■■■□□ 2.74
SLC22A23-208	ENST00000482874	PKD1L3	Q7Z443	1732 aa		32.12	■■■□□ 2.73
SLC22A23-208	ENST00000482874	BAG6	P46379	1132 aa		32.12	■■■□□ 2.73
SLC22A23-208	ENST00000482874	IGSF1	Q8N6C5	1336 aa		32.11	■■■□□ 2.73
SLC22A23-208	ENST00000482874	RAPGEF4	Q8WZA2	1011 aa		32.11	■■■□□ 2.73
SLC22A23-208	ENST00000482874	NHS	Q6T4R5	1651 aa		32.11	■■■□□ 2.73
SLC22A23-208	ENST00000482874	MTHFS	P49914	203 aa		32.09	■■■□□ 2.73
SLC22A23-208	ENST00000482874	ZCRB1	Q8TBF4	217 aa	Known RBP	32.09	■■■□□ 2.73
SLC22A23-208	ENST00000482874	TAT	P17735	454 aa	Predicted RBP	32.08	■■■□□ 2.73

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms