RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, human

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39B-219	ENST00000481456	AEBP1	Q8IUX7	1158 aa		13.84	□□□□□ -0.19
DDX39B-219	ENST00000481456	SPC24	Q8NBT2	197 aa		13.84	□□□□□ -0.19
DDX39B-219	ENST00000481456	SRCIN1	Q9C0H9	1055 aa		13.84	□□□□□ -0.19
DDX39B-219	ENST00000481456	MBD5	Q9P267	1494 aa		13.83	□□□□□ -0.19
DDX39B-219	ENST00000481456	SLC4A2	P04920	1241 aa		13.83	□□□□□ -0.2
DDX39B-219	ENST00000481456	TEX35	Q5T0J7	233 aa		13.83	□□□□□ -0.2
DDX39B-219	ENST00000481456	ATP10B	O94823	1461 aa		13.83	□□□□□ -0.2
DDX39B-219	ENST00000481456	OFD1	O75665	1012 aa		13.83	□□□□□ -0.2
DDX39B-219	ENST00000481456	CABP1	Q9NZU7	370 aa		13.83	□□□□□ -0.2
DDX39B-219	ENST00000481456	KDM5B	Q9UGL1	1544 aa		13.83	□□□□□ -0.2
DDX39B-219	ENST00000481456	PSMA5	P28066	241 aa		13.82	□□□□□ -0.2
DDX39B-219	ENST00000481456	CDK19	Q9BWU1	502 aa		13.82	□□□□□ -0.2
DDX39B-219	ENST00000481456	ZNF608	Q9ULD9	1512 aa	Predicted RBP	13.82	□□□□□ -0.2
DDX39B-219	ENST00000481456	PDC	P20941	246 aa		13.82	□□□□□ -0.2
DDX39B-219	ENST00000481456	LRSAM1	Q6UWE0	723 aa		13.82	□□□□□ -0.2
DDX39B-219	ENST00000481456	CCDC30	Q5VVM6	783 aa		13.82	□□□□□ -0.2
DDX39B-219	ENST00000481456	RBM25	P49756	843 aa	Known RBP	13.81	□□□□□ -0.2
DDX39B-219	ENST00000481456	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.81	□□□□□ -0.2
DDX39B-219	ENST00000481456	SYCP2	Q9BX26	1530 aa		13.81	□□□□□ -0.2
DDX39B-219	ENST00000481456	CCDC66	A2RUB6	948 aa		13.81	□□□□□ -0.2
DDX39B-219	ENST00000481456	CCDC183	Q5T5S1	534 aa		13.81	□□□□□ -0.2
DDX39B-219	ENST00000481456	TTC22	Q5TAA0	569 aa		13.81	□□□□□ -0.2
DDX39B-219	ENST00000481456	CCDC73	Q6ZRK6	1079 aa		13.81	□□□□□ -0.2
DDX39B-219	ENST00000481456	NUTM2F	A1L443	756 aa		13.81	□□□□□ -0.2
DDX39B-219	ENST00000481456	EIF2S2	P20042	333 aa	Known RBP	13.8	□□□□□ -0.2
DDX39B-219	ENST00000481456	PDCL2	Q8N4E4	241 aa		13.8	□□□□□ -0.2
DDX39B-219	ENST00000481456	GOLGA6L1	Q8N7Z2	621 aa		13.8	□□□□□ -0.2
DDX39B-219	ENST00000481456	LTV1	Q96GA3	475 aa	Predicted RBP	13.8	□□□□□ -0.2
DDX39B-219	ENST00000481456	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.8	□□□□□ -0.2
DDX39B-219	ENST00000481456	SURF6	O75683	361 aa	Known RBP	13.8	□□□□□ -0.2
DDX39B-219	ENST00000481456	ARHGAP45	Q92619	1136 aa		13.8	□□□□□ -0.2
DDX39B-219	ENST00000481456	RBM27	Q9P2N5	1060 aa	Known RBP	13.8	□□□□□ -0.2
DDX39B-219	ENST00000481456	HOMER1	Q86YM7	354 aa		13.8	□□□□□ -0.2
DDX39B-219	ENST00000481456	CCDC34	Q96HJ3	373 aa		13.8	□□□□□ -0.2
DDX39B-219	ENST00000481456	THUMPD2	Q9BTF0	503 aa	Known RBP	13.79	□□□□□ -0.2
DDX39B-219	ENST00000481456	ZKSCAN5	Q9Y2L8	839 aa		13.79	□□□□□ -0.2
DDX39B-219	ENST00000481456	ANKRD36B	Q8N2N9	1353 aa		13.79	□□□□□ -0.2
DDX39B-219	ENST00000481456	SMARCA5	O60264	1052 aa	Predicted RBP	13.79	□□□□□ -0.2
DDX39B-219	ENST00000481456	CCDC112	Q8NEF3	446 aa		13.79	□□□□□ -0.2
DDX39B-219	ENST00000481456	NAT10	Q9H0A0	1025 aa	Known RBP	13.79	□□□□□ -0.2
DDX39B-219	ENST00000481456	GAS2L2	Q8NHY3	880 aa		13.78	□□□□□ -0.2
DDX39B-219	ENST00000481456	NOS1	P29475	1434 aa		13.78	□□□□□ -0.2
DDX39B-219	ENST00000481456	ZBTB40	Q9NUA8	1239 aa		13.78	□□□□□ -0.2
DDX39B-219	ENST00000481456	KRT85	P78386	507 aa		13.78	□□□□□ -0.2
DDX39B-219	ENST00000481456	GPS2	Q13227	327 aa		13.78	□□□□□ -0.2
DDX39B-219	ENST00000481456	UVSSA	Q2YD98	709 aa		13.78	□□□□□ -0.2
DDX39B-219	ENST00000481456	PRIMPOL	Q96LW4	560 aa		13.78	□□□□□ -0.2
DDX39B-219	ENST00000481456	CARD14	Q9BXL6	1004 aa		13.78	□□□□□ -0.2
DDX39B-219	ENST00000481456	DISP1	Q96F81	1524 aa		13.78	□□□□□ -0.2
DDX39B-219	ENST00000481456	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
DDX39B-219	ENST00000481456	TRMT2A	Q8IZ69	625 aa	Known RBP	13.78	□□□□□ -0.2
DDX39B-219	ENST00000481456	CYP46A1	Q9Y6A2	500 aa		13.78	□□□□□ -0.2
DDX39B-219	ENST00000481456	TNMD	Q9H2S6	317 aa		13.77	□□□□□ -0.2
DDX39B-219	ENST00000481456	DMRT2	Q9Y5R5	561 aa		13.77	□□□□□ -0.2
DDX39B-219	ENST00000481456	ABCC2	Q92887	1545 aa		13.77	□□□□□ -0.2
DDX39B-219	ENST00000481456	C14orf93	Q9H972	538 aa	Known RBP	13.77	□□□□□ -0.21
DDX39B-219	ENST00000481456	PRDM10	Q9NQV6	1147 aa		13.77	□□□□□ -0.21
DDX39B-219	ENST00000481456	CLASRP	Q8N2M8	674 aa	Known RBP	13.77	□□□□□ -0.21
DDX39B-219	ENST00000481456	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.77	□□□□□ -0.21
DDX39B-219	ENST00000481456	ZNF521	Q96K83	1311 aa		13.77	□□□□□ -0.21
DDX39B-219	ENST00000481456	BCORL1	Q5H9F3	1711 aa		13.77	□□□□□ -0.21
DDX39B-219	ENST00000481456	SULT6B1	Q6IMI4	303 aa		13.77	□□□□□ -0.21
DDX39B-219	ENST00000481456	RBM42	Q9BTD8	480 aa	Known RBP	13.77	□□□□□ -0.21
DDX39B-219	ENST00000481456	HIP1	O00291	1037 aa		13.76	□□□□□ -0.21
DDX39B-219	ENST00000481456	MX1	P20591	662 aa		13.76	□□□□□ -0.21
DDX39B-219	ENST00000481456	TEF	Q10587	303 aa		13.76	□□□□□ -0.21
DDX39B-219	ENST00000481456	USP25	Q9UHP3	1055 aa		13.76	□□□□□ -0.21
DDX39B-219	ENST00000481456	DENND4B	O75064	1496 aa	Predicted RBP	13.76	□□□□□ -0.21
DDX39B-219	ENST00000481456	FSD2	A1L4K1	749 aa		13.76	□□□□□ -0.21
DDX39B-219	ENST00000481456	MNS1	Q8NEH6	495 aa		13.76	□□□□□ -0.21
DDX39B-219	ENST00000481456		A0A0U1RQG5	324 aa	Predicted RBP	13.76	□□□□□ -0.21
DDX39B-219	ENST00000481456	PDIA4	P13667	645 aa	Known RBP	13.76	□□□□□ -0.21
DDX39B-219	ENST00000481456	GORAB	Q5T7V8	394 aa		13.76	□□□□□ -0.21
DDX39B-219	ENST00000481456	NUP62CL	Q9H1M0	184 aa		13.76	□□□□□ -0.21
DDX39B-219	ENST00000481456	CBX1	P83916	185 aa		13.75	□□□□□ -0.21
DDX39B-219	ENST00000481456	PBRM1	Q86U86	1689 aa		13.75	□□□□□ -0.21
DDX39B-219	ENST00000481456	PRIM1	P49642	420 aa	Known RBP	13.75	□□□□□ -0.21
DDX39B-219	ENST00000481456	SLC52A1	Q9NWF4	448 aa		13.75	□□□□□ -0.21
DDX39B-219	ENST00000481456	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.74	□□□□□ -0.21
DDX39B-219	ENST00000481456	TAF3	Q5VWG9	929 aa		13.74	□□□□□ -0.21
DDX39B-219	ENST00000481456	ANKRD1	Q15327	319 aa		13.74	□□□□□ -0.21
DDX39B-219	ENST00000481456	CCAR2	Q8N163	923 aa	Known RBP	13.74	□□□□□ -0.21
DDX39B-219	ENST00000481456	PDRG1	Q9NUG6	133 aa		13.74	□□□□□ -0.21
DDX39B-219	ENST00000481456	EXOC6B	Q9Y2D4	811 aa		13.74	□□□□□ -0.21
DDX39B-219	ENST00000481456	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.74	□□□□□ -0.21
DDX39B-219	ENST00000481456	MAP3K11	Q16584	847 aa		13.74	□□□□□ -0.21
DDX39B-219	ENST00000481456	LARP1B	Q659C4	914 aa	Known RBP	13.74	□□□□□ -0.21
DDX39B-219	ENST00000481456	UPF3B	Q9BZI7	483 aa	Known RBP	13.74	□□□□□ -0.21
DDX39B-219	ENST00000481456	PODXL2	Q9NZ53	605 aa		13.74	□□□□□ -0.21
DDX39B-219	ENST00000481456	ADCY5	O95622	1261 aa		13.73	□□□□□ -0.21
DDX39B-219	ENST00000481456	TERF1	P54274	439 aa		13.73	□□□□□ -0.21
DDX39B-219	ENST00000481456	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.73	□□□□□ -0.21
DDX39B-219	ENST00000481456	ANTXR1	Q9H6X2	564 aa		13.73	□□□□□ -0.21
DDX39B-219	ENST00000481456	NOL7	Q9UMY1	257 aa	Known RBP	13.73	□□□□□ -0.21
DDX39B-219	ENST00000481456	NEXN	Q0ZGT2	675 aa		13.73	□□□□□ -0.21
DDX39B-219	ENST00000481456	MAST1	Q9Y2H9	1570 aa		13.73	□□□□□ -0.21
DDX39B-219	ENST00000481456	KIN	O60870	393 aa	Known RBP	13.73	□□□□□ -0.21
DDX39B-219	ENST00000481456	MRPL50	Q8N5N7	158 aa	Known RBP	13.73	□□□□□ -0.21
DDX39B-219	ENST00000481456	FBXW7	Q969H0	707 aa		13.73	□□□□□ -0.21
DDX39B-219	ENST00000481456	MBIP	Q9NS73	344 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms