RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 USP35Q9P2H5 1018 aa27.88■■■□□ 2.05
CTSA-206ENST00000480961 NWD2Q9ULI1 1742 aa27.87■■■□□ 2.05
CTSA-206ENST00000480961 AMER1Q5JTC6 1135 aaPredicted RBP27.87■■■□□ 2.05
CTSA-206ENST00000480961 SPATA31A5Q5VU36 1347 aa27.87■■■□□ 2.05
CTSA-206ENST00000480961 SPATA31A7Q8IWB4 1347 aa27.87■■■□□ 2.05
CTSA-206ENST00000480961 AMPHP49418 695 aa27.86■■■□□ 2.05
CTSA-206ENST00000480961 LMO7Q8WWI1 1683 aa27.86■■■□□ 2.05
CTSA-206ENST00000480961 COL5A2P05997 1499 aaPredicted RBP27.85■■■□□ 2.05
CTSA-206ENST00000480961 NRAPQ86VF7 1730 aa27.85■■■□□ 2.05
CTSA-206ENST00000480961 MORC1Q86VD1 984 aa27.85■■■□□ 2.05
CTSA-206ENST00000480961 IP6K1Q92551 441 aa27.85■■■□□ 2.05
CTSA-206ENST00000480961 KIF20BQ96Q89 1820 aa27.84■■■□□ 2.05
CTSA-206ENST00000480961 CSB-PGBD3P0DP91 1061 aa27.84■■■□□ 2.05
CTSA-206ENST00000480961 FAM98CQ17RN3 349 aaKnown RBP27.84■■■□□ 2.05
CTSA-206ENST00000480961 CC2D1BQ5T0F9 858 aaKnown RBP27.84■■■□□ 2.05
CTSA-206ENST00000480961 LTV1Q96GA3 475 aaPredicted RBP27.84■■■□□ 2.05
CTSA-206ENST00000480961 EMILIN1Q9Y6C2 1016 aa27.83■■■□□ 2.05
CTSA-206ENST00000480961 SPATA31A1Q5TZJ5 1347 aa27.83■■■□□ 2.05
CTSA-206ENST00000480961 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.83■■■□□ 2.05
CTSA-206ENST00000480961 COL18A1P39060 1754 aa27.82■■■□□ 2.04
CTSA-206ENST00000480961 PPM1GO15355 546 aaPredicted RBP27.82■■■□□ 2.04
CTSA-206ENST00000480961 HOXC9P31274 260 aa27.82■■■□□ 2.04
CTSA-206ENST00000480961 TOM1L2Q6ZVM7 507 aa27.82■■■□□ 2.04
CTSA-206ENST00000480961 RGS12O14924 1447 aa27.82■■■□□ 2.04
CTSA-206ENST00000480961 GLI3P10071 1580 aa27.82■■■□□ 2.04
CTSA-206ENST00000480961 ANKRD24Q8TF21 1146 aa27.81■■■□□ 2.04
CTSA-206ENST00000480961 A0A0G2JS52 829 aa27.8■■■□□ 2.04
CTSA-206ENST00000480961 MYT1Q01538 1121 aa27.8■■■□□ 2.04
CTSA-206ENST00000480961 NSD2O96028 1365 aa27.8■■■□□ 2.04
CTSA-206ENST00000480961 WDR17Q8IZU2 1322 aa27.79■■■□□ 2.04
CTSA-206ENST00000480961 DDX10Q13206 875 aaKnown RBP27.78■■■□□ 2.04
CTSA-206ENST00000480961 SEPT12Q8IYM1 358 aa27.78■■■□□ 2.04
CTSA-206ENST00000480961 HSP90AB2PQ58FF8 381 aa27.77■■■□□ 2.04
CTSA-206ENST00000480961 POLKQ9UBT6 870 aa27.77■■■□□ 2.04
CTSA-206ENST00000480961 TCP11L2Q8N4U5 519 aa27.76■■■□□ 2.03
CTSA-206ENST00000480961 NLRP2Q9NX02 1062 aa27.76■■■□□ 2.03
CTSA-206ENST00000480961 CRB1P82279 1406 aa27.75■■■□□ 2.03
CTSA-206ENST00000480961 ERBB3P21860 1342 aa27.75■■■□□ 2.03
CTSA-206ENST00000480961 ONECUT3O60422 494 aaPredicted RBP27.75■■■□□ 2.03
CTSA-206ENST00000480961 CDK12Q9NYV4 1490 aaPredicted RBP27.75■■■□□ 2.03
CTSA-206ENST00000480961 LTN1O94822 1766 aa27.73■■■□□ 2.03
CTSA-206ENST00000480961 BLMP54132 1417 aaPredicted RBP27.73■■■□□ 2.03
CTSA-206ENST00000480961 CARD10Q9BWT7 1032 aa27.72■■■□□ 2.03
CTSA-206ENST00000480961 RTL1A6NKG5 1358 aa27.72■■■□□ 2.03
CTSA-206ENST00000480961 ABCC6O95255 1503 aa27.72■■■□□ 2.03
CTSA-206ENST00000480961 FLT4P35916 1363 aa27.71■■■□□ 2.03
CTSA-206ENST00000480961 RGPD5Q99666 1765 aa27.7■■■□□ 2.02
CTSA-206ENST00000480961 BARGINQ6ZT62 677 aa27.69■■■□□ 2.02
CTSA-206ENST00000480961 ZNF316A6NFI3 1004 aaPredicted RBP27.68■■■□□ 2.02
CTSA-206ENST00000480961 THRAP3Q9Y2W1 955 aaKnown RBP27.68■■■□□ 2.02
CTSA-206ENST00000480961 PEAK1Q9H792 1746 aa27.67■■■□□ 2.02
CTSA-206ENST00000480961 INSRP06213 1382 aa27.67■■■□□ 2.02
CTSA-206ENST00000480961 NPC1L1Q9UHC9 1359 aa27.67■■■□□ 2.02
CTSA-206ENST00000480961 ANKRD26Q9UPS8 1709 aa27.66■■■□□ 2.02
CTSA-206ENST00000480961 KIF24Q5T7B8 1368 aa27.65■■■□□ 2.02
CTSA-206ENST00000480961 NBPF6Q5VWK0 638 aa27.65■■■□□ 2.02
CTSA-206ENST00000480961 USHBP1Q8N6Y0 703 aa27.65■■■□□ 2.02
CTSA-206ENST00000480961 NBPF4Q96M43 638 aa27.65■■■□□ 2.02
CTSA-206ENST00000480961 SOCS7O14512 581 aa27.64■■■□□ 2.02
CTSA-206ENST00000480961 FAM182BQ5T319 152 aa27.63■■■□□ 2.01
CTSA-206ENST00000480961 KRT27Q7Z3Y8 459 aa27.63■■■□□ 2.01
CTSA-206ENST00000480961 MTHFSP49914 203 aa27.62■■■□□ 2.01
CTSA-206ENST00000480961 SMG6Q86US8 1419 aaKnown RBP27.6■■■□□ 2.01
CTSA-206ENST00000480961 EIF4A2Q14240 407 aaKnown RBP27.6■■■□□ 2.01
CTSA-206ENST00000480961 PDE3BQ13370 1112 aa27.58■■■□□ 2.01
CTSA-206ENST00000480961 THSD7AQ9UPZ6 1657 aa27.56■■■□□ 2
CTSA-206ENST00000480961 MAP2P11137 1827 aaKnown RBP27.56■■■□□ 2
CTSA-206ENST00000480961 IL2RBP14784 551 aa27.56■■■□□ 2
CTSA-206ENST00000480961 DDB1Q16531 1140 aa27.56■■■□□ 2
CTSA-206ENST00000480961 EYA1Q99502 592 aa27.55■■■□□ 2
CTSA-206ENST00000480961 CDCA7Q9BWT1 371 aaPredicted RBP27.55■■■□□ 2
CTSA-206ENST00000480961 DISP2A7MBM2 1401 aa27.55■■■□□ 2
CTSA-206ENST00000480961 EP400Q96L91 3159 aa27.54■■■□□ 2
CTSA-206ENST00000480961 PPP2R1AP30153 589 aa27.53■■■□□ 2
CTSA-206ENST00000480961 EXOC5O00471 708 aa27.52■■■□□ 2
CTSA-206ENST00000480961 BRWD3Q6RI45 1802 aa27.51■■□□□ 1.99
CTSA-206ENST00000480961 UPF1Q92900 1129 aaKnown RBP eCLIP27.51■■□□□ 1.99
CTSA-206ENST00000480961 IL13P35225 146 aa27.49■■□□□ 1.99
CTSA-206ENST00000480961 MARCH10Q8NA82 808 aaPredicted RBP27.49■■□□□ 1.99
CTSA-206ENST00000480961 RAPGEF4Q8WZA2 1011 aa27.48■■□□□ 1.99
CTSA-206ENST00000480961 RGPD2P0DJD1 1756 aa27.47■■□□□ 1.99
CTSA-206ENST00000480961 PARD3Q8TEW0 1356 aa27.47■■□□□ 1.99
CTSA-206ENST00000480961 MEGF6O75095 1541 aa27.46■■□□□ 1.99
CTSA-206ENST00000480961 TATP17735 454 aaPredicted RBP27.45■■□□□ 1.98
CTSA-206ENST00000480961 DDX54Q8TDD1 881 aaKnown RBP27.45■■□□□ 1.98
CTSA-206ENST00000480961 FAM208AQ9UK61 1670 aaKnown RBP27.44■■□□□ 1.98
CTSA-206ENST00000480961 DIAPH1O60610 1272 aaKnown RBP27.44■■□□□ 1.98
CTSA-206ENST00000480961 AEBP1Q8IUX7 1158 aa27.44■■□□□ 1.98
CTSA-206ENST00000480961 IGSF1Q8N6C5 1336 aa27.43■■□□□ 1.98
CTSA-206ENST00000480961 FAM196AQ6ZSG2 479 aa27.43■■□□□ 1.98
CTSA-206ENST00000480961 ZCRB1Q8TBF4 217 aaKnown RBP27.43■■□□□ 1.98
CTSA-206ENST00000480961 PARP4Q9UKK3 1724 aaKnown RBP27.43■■□□□ 1.98
CTSA-206ENST00000480961 LRRC37A3O60309 1634 aa27.42■■□□□ 1.98
CTSA-206ENST00000480961 TNS2Q63HR2 1409 aa27.41■■□□□ 1.98
CTSA-206ENST00000480961 RALBP1Q15311 655 aa27.41■■□□□ 1.98
CTSA-206ENST00000480961 SULT6B1Q6IMI4 303 aa27.41■■□□□ 1.98
CTSA-206ENST00000480961 CFAP53Q96M91 514 aa27.41■■□□□ 1.98
CTSA-206ENST00000480961 TRIM37O94972 964 aa27.39■■□□□ 1.98
CTSA-206ENST00000480961 OVOS2A0A0G2JMS6 1433 aa27.39■■□□□ 1.97
CTSA-206ENST00000480961 NCAPD2Q15021 1401 aa27.39■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms