RNA–Protein interactions for RNA: ENST00000478887.1

SFI1-222, Transcript of SFI1 centrin binding protein, human

TSL 4

Gene SFI1, Length 662 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-222	ENST00000478887	RXRB	P28702	533 aa		13.05	□□□□□ -0.32
SFI1-222	ENST00000478887	RGS12	O14924	1447 aa		13.05	□□□□□ -0.32
SFI1-222	ENST00000478887	GJD4	Q96KN9	370 aa	Predicted RBP	13.04	□□□□□ -0.32
SFI1-222	ENST00000478887	RTL1	A6NKG5	1358 aa		13.04	□□□□□ -0.32
SFI1-222	ENST00000478887	LTN1	O94822	1766 aa		13.03	□□□□□ -0.32
SFI1-222	ENST00000478887	ZBTB7C	A1YPR0	619 aa		13.03	□□□□□ -0.32
SFI1-222	ENST00000478887	PER1	O15534	1290 aa	Predicted RBP	13.03	□□□□□ -0.32
SFI1-222	ENST00000478887	AXIN2	Q9Y2T1	843 aa		13.03	□□□□□ -0.32
SFI1-222	ENST00000478887	KNSTRN	Q9Y448	316 aa		13.03	□□□□□ -0.32
SFI1-222	ENST00000478887	MAP3K19	Q56UN5	1328 aa		13.03	□□□□□ -0.32
SFI1-222	ENST00000478887	SPATA31A5	Q5VU36	1347 aa		13.03	□□□□□ -0.32
SFI1-222	ENST00000478887	SPATA31A7	Q8IWB4	1347 aa		13.03	□□□□□ -0.32
SFI1-222	ENST00000478887	BLM	P54132	1417 aa	Predicted RBP	13.03	□□□□□ -0.32
SFI1-222	ENST00000478887	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.02	□□□□□ -0.33
SFI1-222	ENST00000478887	KIF24	Q5T7B8	1368 aa		13.02	□□□□□ -0.33
SFI1-222	ENST00000478887	NPC1L1	Q9UHC9	1359 aa		13.02	□□□□□ -0.33
SFI1-222	ENST00000478887	STRN4	Q9NRL3	753 aa		13.01	□□□□□ -0.33
SFI1-222	ENST00000478887	WDR17	Q8IZU2	1322 aa		13.01	□□□□□ -0.33
SFI1-222	ENST00000478887	CRB1	P82279	1406 aa		13.01	□□□□□ -0.33
SFI1-222	ENST00000478887	ERBB3	P21860	1342 aa		13	□□□□□ -0.33
SFI1-222	ENST00000478887	SPATA31A1	Q5TZJ5	1347 aa		13	□□□□□ -0.33
SFI1-222	ENST00000478887	FBLN1	P23142	703 aa		13	□□□□□ -0.33
SFI1-222	ENST00000478887	LARP1	Q6PKG0	1096 aa	Known RBP	13	□□□□□ -0.33
SFI1-222	ENST00000478887	IP6K1	Q92551	441 aa		13	□□□□□ -0.33
SFI1-222	ENST00000478887	PEAK1	Q9H792	1746 aa		12.99	□□□□□ -0.33
SFI1-222	ENST00000478887	THSD7A	Q9UPZ6	1657 aa		12.99	□□□□□ -0.33
SFI1-222	ENST00000478887	SMG6	Q86US8	1419 aa	Known RBP	12.99	□□□□□ -0.33
SFI1-222	ENST00000478887	ONECUT3	O60422	494 aa	Predicted RBP	12.99	□□□□□ -0.33
SFI1-222	ENST00000478887	EVA1C	P58658	441 aa		12.99	□□□□□ -0.33
SFI1-222	ENST00000478887	RRS1	Q15050	365 aa	Known RBP	12.99	□□□□□ -0.33
SFI1-222	ENST00000478887	CCDC9	Q9Y3X0	531 aa	Known RBP	12.99	□□□□□ -0.33
SFI1-222	ENST00000478887	FLT4	P35916	1363 aa		12.98	□□□□□ -0.33
SFI1-222	ENST00000478887	HOXC9	P31274	260 aa		12.98	□□□□□ -0.33
SFI1-222	ENST00000478887	RGPD5	Q99666	1765 aa		12.97	□□□□□ -0.33
SFI1-222	ENST00000478887	FAM208A	Q9UK61	1670 aa	Known RBP	12.97	□□□□□ -0.33
SFI1-222	ENST00000478887	AMPH	P49418	695 aa		12.97	□□□□□ -0.33
SFI1-222	ENST00000478887	THRAP3	Q9Y2W1	955 aa	Known RBP	12.97	□□□□□ -0.33
SFI1-222	ENST00000478887	EMILIN1	Q9Y6C2	1016 aa		12.97	□□□□□ -0.33
SFI1-222	ENST00000478887	INSR	P06213	1382 aa		12.96	□□□□□ -0.33
SFI1-222	ENST00000478887	FAM98C	Q17RN3	349 aa	Known RBP	12.96	□□□□□ -0.33
SFI1-222	ENST00000478887	BARGIN	Q6ZT62	677 aa		12.96	□□□□□ -0.33
SFI1-222	ENST00000478887	TCP11L2	Q8N4U5	519 aa		12.96	□□□□□ -0.33
SFI1-222	ENST00000478887	ANKRD24	Q8TF21	1146 aa		12.96	□□□□□ -0.33
SFI1-222	ENST00000478887	CARD10	Q9BWT7	1032 aa		12.96	□□□□□ -0.33
SFI1-222	ENST00000478887	POLK	Q9UBT6	870 aa		12.96	□□□□□ -0.33
SFI1-222	ENST00000478887	CSB-PGBD3	P0DP91	1061 aa		12.95	□□□□□ -0.34
SFI1-222	ENST00000478887	TOM1L2	Q6ZVM7	507 aa		12.95	□□□□□ -0.34
SFI1-222	ENST00000478887	MORC1	Q86VD1	984 aa		12.95	□□□□□ -0.34
SFI1-222	ENST00000478887	SEPT12	Q8IYM1	358 aa		12.95	□□□□□ -0.34
SFI1-222	ENST00000478887	DISP2	A7MBM2	1401 aa		12.95	□□□□□ -0.34
SFI1-222	ENST00000478887	USP35	Q9P2H5	1018 aa		12.94	□□□□□ -0.34
SFI1-222	ENST00000478887	WNK3	Q9BYP7	1800 aa		12.94	□□□□□ -0.34
SFI1-222	ENST00000478887	TNNT2	P45379	298 aa	Predicted RBP	12.93	□□□□□ -0.34
SFI1-222	ENST00000478887	CC2D1B	Q5T0F9	858 aa	Known RBP	12.93	□□□□□ -0.34
SFI1-222	ENST00000478887	PARP4	Q9UKK3	1724 aa	Known RBP	12.93	□□□□□ -0.34
SFI1-222	ENST00000478887	SOCS7	O14512	581 aa		12.92	□□□□□ -0.34
SFI1-222	ENST00000478887	NCAPD2	Q15021	1401 aa		12.92	□□□□□ -0.34
SFI1-222	ENST00000478887	HSP90AB2P	Q58FF8	381 aa		12.92	□□□□□ -0.34
SFI1-222	ENST00000478887	LRRC37A3	O60309	1634 aa		12.91	□□□□□ -0.34
SFI1-222	ENST00000478887	LTV1	Q96GA3	475 aa	Predicted RBP	12.91	□□□□□ -0.34
SFI1-222	ENST00000478887	NLRP2	Q9NX02	1062 aa		12.91	□□□□□ -0.34
SFI1-222	ENST00000478887		A0A0G2JS52	829 aa		12.9	□□□□□ -0.34
SFI1-222	ENST00000478887	PPM1G	O15355	546 aa	Predicted RBP	12.9	□□□□□ -0.34
SFI1-222	ENST00000478887	MYT1	Q01538	1121 aa		12.9	□□□□□ -0.34
SFI1-222	ENST00000478887	CDCA7	Q9BWT1	371 aa	Predicted RBP	12.9	□□□□□ -0.34
SFI1-222	ENST00000478887	MAP2	P11137	1827 aa	Known RBP	12.9	□□□□□ -0.34
SFI1-222	ENST00000478887	BRWD3	Q6RI45	1802 aa		12.9	□□□□□ -0.34
SFI1-222	ENST00000478887	TNS2	Q63HR2	1409 aa		12.89	□□□□□ -0.35
SFI1-222	ENST00000478887	KRT27	Q7Z3Y8	459 aa		12.89	□□□□□ -0.35
SFI1-222	ENST00000478887	ZNF316	A6NFI3	1004 aa	Predicted RBP	12.88	□□□□□ -0.35
SFI1-222	ENST00000478887	DDX10	Q13206	875 aa	Known RBP	12.88	□□□□□ -0.35
SFI1-222	ENST00000478887	NBPF6	Q5VWK0	638 aa		12.88	□□□□□ -0.35
SFI1-222	ENST00000478887	NBPF4	Q96M43	638 aa		12.88	□□□□□ -0.35
SFI1-222	ENST00000478887	PARD3	Q8TEW0	1356 aa		12.88	□□□□□ -0.35
SFI1-222	ENST00000478887	IL2RB	P14784	551 aa		12.87	□□□□□ -0.35
SFI1-222	ENST00000478887	EIF4A2	Q14240	407 aa	Known RBP	12.87	□□□□□ -0.35
SFI1-222	ENST00000478887	MEGF6	O75095	1541 aa		12.87	□□□□□ -0.35
SFI1-222	ENST00000478887	COL3A1	P02461	1466 aa	Predicted RBP	12.86	□□□□□ -0.35
SFI1-222	ENST00000478887	MTHFS	P49914	203 aa		12.86	□□□□□ -0.35
SFI1-222	ENST00000478887	DDB1	Q16531	1140 aa		12.86	□□□□□ -0.35
SFI1-222	ENST00000478887	RGPD2	P0DJD1	1756 aa		12.86	□□□□□ -0.35
SFI1-222	ENST00000478887	OVOS2	A0A0G2JMS6	1433 aa		12.86	□□□□□ -0.35
SFI1-222	ENST00000478887	CNGB1	Q14028	1251 aa	Predicted RBP	12.85	□□□□□ -0.35
SFI1-222	ENST00000478887	EYA1	Q99502	592 aa		12.85	□□□□□ -0.35
SFI1-222	ENST00000478887	IGSF1	Q8N6C5	1336 aa		12.85	□□□□□ -0.35
SFI1-222	ENST00000478887	RGPD1	P0DJD0	1748 aa		12.85	□□□□□ -0.35
SFI1-222	ENST00000478887	PLEKHG2	Q9H7P9	1386 aa		12.84	□□□□□ -0.35
SFI1-222	ENST00000478887	PDE3B	Q13370	1112 aa		12.84	□□□□□ -0.35
SFI1-222	ENST00000478887	USHBP1	Q8N6Y0	703 aa		12.84	□□□□□ -0.35
SFI1-222	ENST00000478887	UPF1	Q92900	1129 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
SFI1-222	ENST00000478887	BCL9	O00512	1426 aa		12.84	□□□□□ -0.35
SFI1-222	ENST00000478887	IL13	P35225	146 aa		12.83	□□□□□ -0.36
SFI1-222	ENST00000478887	EXOC5	O00471	708 aa		12.82	□□□□□ -0.36
SFI1-222	ENST00000478887	PPP2R1A	P30153	589 aa		12.82	□□□□□ -0.36
SFI1-222	ENST00000478887	KDR	P35968	1356 aa		12.81	□□□□□ -0.36
SFI1-222	ENST00000478887	FAM182B	Q5T319	152 aa		12.81	□□□□□ -0.36
SFI1-222	ENST00000478887	FAM196A	Q6ZSG2	479 aa		12.81	□□□□□ -0.36
SFI1-222	ENST00000478887	MARCH10	Q8NA82	808 aa	Predicted RBP	12.81	□□□□□ -0.36
SFI1-222	ENST00000478887	RAPGEF4	Q8WZA2	1011 aa		12.81	□□□□□ -0.36
SFI1-222	ENST00000478887	PKD1L3	Q7Z443	1732 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms