RNA–Protein interactions for RNA: ENST00000478215.1

COL1A2-207, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 3

Gene COL1A2, Length 863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-207ENST00000478215 ARHGEF25Q86VW2 580 aa18.1■□□□□ 0.49
COL1A2-207ENST00000478215 KCNH5Q8NCM2 988 aa18.1■□□□□ 0.49
COL1A2-207ENST00000478215 PARP4Q9UKK3 1724 aaKnown RBP18.09■□□□□ 0.49
COL1A2-207ENST00000478215 NSD3Q9BZ95 1437 aa18.09■□□□□ 0.49
COL1A2-207ENST00000478215 KAT6BQ8WYB5 2073 aa18.09■□□□□ 0.49
COL1A2-207ENST00000478215 CARD14Q9BXL6 1004 aa18.08■□□□□ 0.48
COL1A2-207ENST00000478215 FAM208AQ9UK61 1670 aaKnown RBP18.08■□□□□ 0.48
COL1A2-207ENST00000478215 SPATA31A1Q5TZJ5 1347 aa18.07■□□□□ 0.48
COL1A2-207ENST00000478215 LARP1Q6PKG0 1096 aaKnown RBP18.07■□□□□ 0.48
COL1A2-207ENST00000478215 AXIN2Q9Y2T1 843 aa18.07■□□□□ 0.48
COL1A2-207ENST00000478215 PEAK1Q9H792 1746 aa18.06■□□□□ 0.48
COL1A2-207ENST00000478215 ONECUT3O60422 494 aaPredicted RBP18.06■□□□□ 0.48
COL1A2-207ENST00000478215 EVA1CP58658 441 aa18.06■□□□□ 0.48
COL1A2-207ENST00000478215 FAM98CQ17RN3 349 aaKnown RBP18.06■□□□□ 0.48
COL1A2-207ENST00000478215 SEPT12Q8IYM1 358 aa18.06■□□□□ 0.48
COL1A2-207ENST00000478215 SBF2Q86WG5 1849 aa18.06■□□□□ 0.48
COL1A2-207ENST00000478215 FYB1O15117 783 aa18.05■□□□□ 0.48
COL1A2-207ENST00000478215 COG3Q96JB2 828 aa18.04■□□□□ 0.48
COL1A2-207ENST00000478215 GGNBP2Q9H3C7 697 aa18.04■□□□□ 0.48
COL1A2-207ENST00000478215 LRRC37A3O60309 1634 aa18.04■□□□□ 0.48
COL1A2-207ENST00000478215 CRB1P82279 1406 aa18.04■□□□□ 0.48
COL1A2-207ENST00000478215 FBLN1P23142 703 aa18.03■□□□□ 0.48
COL1A2-207ENST00000478215 UPF1Q92900 1129 aaKnown RBP eCLIP18.03■□□□□ 0.48
COL1A2-207ENST00000478215 USP35Q9P2H5 1018 aa18.03■□□□□ 0.48
COL1A2-207ENST00000478215 KIF7Q2M1P5 1343 aa18.02■□□□□ 0.48
COL1A2-207ENST00000478215 A0A0G2JS52 829 aa18.01■□□□□ 0.47
COL1A2-207ENST00000478215 MYT1Q01538 1121 aa18.01■□□□□ 0.47
COL1A2-207ENST00000478215 RGPD1P0DJD0 1748 aa18.01■□□□□ 0.47
COL1A2-207ENST00000478215 TNS1Q9HBL0 1735 aaKnown RBP18.01■□□□□ 0.47
COL1A2-207ENST00000478215 WDR17Q8IZU2 1322 aa18■□□□□ 0.47
COL1A2-207ENST00000478215 PANK3Q9H999 370 aa17.99■□□□□ 0.47
COL1A2-207ENST00000478215 MAP3K19Q56UN5 1328 aa17.98■□□□□ 0.47
COL1A2-207ENST00000478215 TCP11L2Q8N4U5 519 aa17.98■□□□□ 0.47
COL1A2-207ENST00000478215 RRS1Q15050 365 aaKnown RBP17.97■□□□□ 0.47
COL1A2-207ENST00000478215 BARGINQ6ZT62 677 aa17.97■□□□□ 0.47
COL1A2-207ENST00000478215 TOM1L2Q6ZVM7 507 aa17.97■□□□□ 0.47
COL1A2-207ENST00000478215 KRT27Q7Z3Y8 459 aa17.97■□□□□ 0.47
COL1A2-207ENST00000478215 BLMP54132 1417 aaPredicted RBP17.97■□□□□ 0.47
COL1A2-207ENST00000478215 ERBB3P21860 1342 aa17.97■□□□□ 0.47
COL1A2-207ENST00000478215 CGNL1Q0VF96 1302 aa17.97■□□□□ 0.47
COL1A2-207ENST00000478215 CCDC7Q96M83 1385 aa17.96■□□□□ 0.47
COL1A2-207ENST00000478215 SHANK3Q9BYB0 1731 aa17.96■□□□□ 0.47
COL1A2-207ENST00000478215 CSB-PGBD3P0DP91 1061 aa17.95■□□□□ 0.46
COL1A2-207ENST00000478215 IP6K1Q92551 441 aa17.95■□□□□ 0.46
COL1A2-207ENST00000478215 FAM182BQ5T319 152 aa17.94■□□□□ 0.46
COL1A2-207ENST00000478215 THRAP3Q9Y2W1 955 aaKnown RBP17.94■□□□□ 0.46
COL1A2-207ENST00000478215 WASHC2AQ641Q2 1341 aa17.94■□□□□ 0.46
COL1A2-207ENST00000478215 RTL1A6NKG5 1358 aa17.93■□□□□ 0.46
COL1A2-207ENST00000478215 DISP2A7MBM2 1401 aa17.93■□□□□ 0.46
COL1A2-207ENST00000478215 HOXC9P31274 260 aa17.93■□□□□ 0.46
COL1A2-207ENST00000478215 ANKRD24Q8TF21 1146 aa17.93■□□□□ 0.46
COL1A2-207ENST00000478215 CARD10Q9BWT7 1032 aa17.93■□□□□ 0.46
COL1A2-207ENST00000478215 AMPHP49418 695 aa17.92■□□□□ 0.46
COL1A2-207ENST00000478215 LTV1Q96GA3 475 aaPredicted RBP17.91■□□□□ 0.46
COL1A2-207ENST00000478215 NLRP2Q9NX02 1062 aa17.9■□□□□ 0.46
COL1A2-207ENST00000478215 EMILIN1Q9Y6C2 1016 aa17.9■□□□□ 0.46
COL1A2-207ENST00000478215 NSD2O96028 1365 aa17.88■□□□□ 0.45
COL1A2-207ENST00000478215 FLT4P35916 1363 aa17.88■□□□□ 0.45
COL1A2-207ENST00000478215 KNSTRNQ9Y448 316 aa17.87■□□□□ 0.45
COL1A2-207ENST00000478215 KIF24Q5T7B8 1368 aa17.87■□□□□ 0.45
COL1A2-207ENST00000478215 TNNT2P45379 298 aaPredicted RBP17.86■□□□□ 0.45
COL1A2-207ENST00000478215 PDE3BQ13370 1112 aa17.86■□□□□ 0.45
COL1A2-207ENST00000478215 HSP90AB2PQ58FF8 381 aa17.86■□□□□ 0.45
COL1A2-207ENST00000478215 AMER1Q5JTC6 1135 aaPredicted RBP17.86■□□□□ 0.45
COL1A2-207ENST00000478215 INSRP06213 1382 aa17.86■□□□□ 0.45
COL1A2-207ENST00000478215 TNS2Q63HR2 1409 aa17.86■□□□□ 0.45
COL1A2-207ENST00000478215 PER1O15534 1290 aaPredicted RBP17.85■□□□□ 0.45
COL1A2-207ENST00000478215 VIRMAQ69YN4 1812 aaKnown RBP17.84■□□□□ 0.45
COL1A2-207ENST00000478215 PKD1L3Q7Z443 1732 aa17.84■□□□□ 0.45
COL1A2-207ENST00000478215 DDB1Q16531 1140 aa17.84■□□□□ 0.45
COL1A2-207ENST00000478215 POLKQ9UBT6 870 aa17.84■□□□□ 0.45
COL1A2-207ENST00000478215 BTAF1O14981 1849 aa17.84■□□□□ 0.45
COL1A2-207ENST00000478215 DOT1LQ8TEK3 1739 aa17.84■□□□□ 0.45
COL1A2-207ENST00000478215 NHSQ6T4R5 1651 aa17.83■□□□□ 0.45
COL1A2-207ENST00000478215 RREB1Q92766 1687 aa17.83■□□□□ 0.45
COL1A2-207ENST00000478215 SMG6Q86US8 1419 aaKnown RBP17.83■□□□□ 0.45
COL1A2-207ENST00000478215 PPM1GO15355 546 aaPredicted RBP17.83■□□□□ 0.44
COL1A2-207ENST00000478215 CCDC125Q86Z20 511 aa17.83■□□□□ 0.44
COL1A2-207ENST00000478215 CDCA7Q9BWT1 371 aaPredicted RBP17.83■□□□□ 0.44
COL1A2-207ENST00000478215 MEGF6O75095 1541 aa17.82■□□□□ 0.44
COL1A2-207ENST00000478215 OVOS2A0A0G2JMS6 1433 aa17.82■□□□□ 0.44
COL1A2-207ENST00000478215 RGPD3A6NKT7 1758 aaPredicted RBP17.82■□□□□ 0.44
COL1A2-207ENST00000478215 RGPD4Q7Z3J3 1758 aa17.82■□□□□ 0.44
COL1A2-207ENST00000478215 FAM196AQ6ZSG2 479 aa17.82■□□□□ 0.44
COL1A2-207ENST00000478215 ITGB4P16144 1822 aa17.82■□□□□ 0.44
COL1A2-207ENST00000478215 IL2RBP14784 551 aa17.81■□□□□ 0.44
COL1A2-207ENST00000478215 NBPF6Q5VWK0 638 aa17.81■□□□□ 0.44
COL1A2-207ENST00000478215 DEFB132Q7Z7B7 95 aa17.81■□□□□ 0.44
COL1A2-207ENST00000478215 MORC1Q86VD1 984 aa17.81■□□□□ 0.44
COL1A2-207ENST00000478215 MARCH10Q8NA82 808 aaPredicted RBP17.81■□□□□ 0.44
COL1A2-207ENST00000478215 NBPF4Q96M43 638 aa17.81■□□□□ 0.44
COL1A2-207ENST00000478215 USHBP1Q8N6Y0 703 aa17.8■□□□□ 0.44
COL1A2-207ENST00000478215 NUP188Q5SRE5 1749 aa17.8■□□□□ 0.44
COL1A2-207ENST00000478215 TRIM37O94972 964 aa17.79■□□□□ 0.44
COL1A2-207ENST00000478215 EXOC5O00471 708 aa17.78■□□□□ 0.44
COL1A2-207ENST00000478215 CC2D1BQ5T0F9 858 aaKnown RBP17.78■□□□□ 0.44
COL1A2-207ENST00000478215 NCAPD2Q15021 1401 aa17.78■□□□□ 0.44
COL1A2-207ENST00000478215 SF3B2Q13435 895 aaKnown RBP17.77■□□□□ 0.44
COL1A2-207ENST00000478215 TOGARAM1Q9Y4F4 1720 aa17.77■□□□□ 0.44
COL1A2-207ENST00000478215 NPC1L1Q9UHC9 1359 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms