RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 OVOS2Q6IE36 1432 aa14.18□□□□□ -0.14
HDAC6-222ENST00000478095 RXRBP28702 533 aa14.18□□□□□ -0.14
HDAC6-222ENST00000478095 KCNH5Q8NCM2 988 aa14.18□□□□□ -0.14
HDAC6-222ENST00000478095 COG3Q96JB2 828 aa14.18□□□□□ -0.14
HDAC6-222ENST00000478095 FYB1O15117 783 aa14.17□□□□□ -0.14
HDAC6-222ENST00000478095 STRN4Q9NRL3 753 aa14.17□□□□□ -0.14
HDAC6-222ENST00000478095 CCDC9Q9Y3X0 531 aaKnown RBP14.17□□□□□ -0.14
HDAC6-222ENST00000478095 CCDC7Q96M83 1385 aa14.17□□□□□ -0.14
HDAC6-222ENST00000478095 ZEB1P37275 1124 aaPredicted RBP14.16□□□□□ -0.14
HDAC6-222ENST00000478095 MARF1Q9Y4F3 1742 aaKnown RBP14.15□□□□□ -0.14
HDAC6-222ENST00000478095 PLCH1Q4KWH8 1693 aa14.15□□□□□ -0.14
HDAC6-222ENST00000478095 RBM6P78332 1123 aaKnown RBP14.15□□□□□ -0.14
HDAC6-222ENST00000478095 ARHGEF25Q86VW2 580 aa14.15□□□□□ -0.14
HDAC6-222ENST00000478095 NFAT5O94916 1531 aa14.15□□□□□ -0.14
HDAC6-222ENST00000478095 COL14A1Q05707 1796 aaKnown RBP14.14□□□□□ -0.15
HDAC6-222ENST00000478095 FBLN1P23142 703 aa14.14□□□□□ -0.15
HDAC6-222ENST00000478095 VPS72Q15906 364 aa14.14□□□□□ -0.15
HDAC6-222ENST00000478095 GJD4Q96KN9 370 aaPredicted RBP14.14□□□□□ -0.15
HDAC6-222ENST00000478095 CGNL1Q0VF96 1302 aa14.14□□□□□ -0.15
HDAC6-222ENST00000478095 AATKQ6ZMQ8 1374 aa14.13□□□□□ -0.15
HDAC6-222ENST00000478095 EVA1CP58658 441 aa14.13□□□□□ -0.15
HDAC6-222ENST00000478095 AXIN2Q9Y2T1 843 aa14.13□□□□□ -0.15
HDAC6-222ENST00000478095 CAMTA1Q9Y6Y1 1673 aa14.13□□□□□ -0.15
HDAC6-222ENST00000478095 RGS12O14924 1447 aa14.12□□□□□ -0.15
HDAC6-222ENST00000478095 LARP1Q6PKG0 1096 aaKnown RBP14.11□□□□□ -0.15
HDAC6-222ENST00000478095 USP54Q70EL1 1684 aa14.1□□□□□ -0.15
HDAC6-222ENST00000478095 RRS1Q15050 365 aaKnown RBP14.1□□□□□ -0.15
HDAC6-222ENST00000478095 USP35Q9P2H5 1018 aa14.1□□□□□ -0.15
HDAC6-222ENST00000478095 KNSTRNQ9Y448 316 aa14.1□□□□□ -0.15
HDAC6-222ENST00000478095 COL5A2P05997 1499 aaPredicted RBP14.1□□□□□ -0.15
HDAC6-222ENST00000478095 LMO7Q8WWI1 1683 aa14.1□□□□□ -0.15
HDAC6-222ENST00000478095 MAP3K19Q56UN5 1328 aa14.1□□□□□ -0.15
HDAC6-222ENST00000478095 SPATA31A5Q5VU36 1347 aa14.1□□□□□ -0.15
HDAC6-222ENST00000478095 SPATA31A7Q8IWB4 1347 aa14.1□□□□□ -0.15
HDAC6-222ENST00000478095 NRAPQ86VF7 1730 aa14.1□□□□□ -0.15
HDAC6-222ENST00000478095 NWD2Q9ULI1 1742 aa14.1□□□□□ -0.15
HDAC6-222ENST00000478095 GLI3P10071 1580 aa14.09□□□□□ -0.15
HDAC6-222ENST00000478095 TNNT2P45379 298 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-222ENST00000478095 FAM98CQ17RN3 349 aaKnown RBP14.09□□□□□ -0.15
HDAC6-222ENST00000478095 RBM42Q9BTD8 480 aaKnown RBP14.09□□□□□ -0.15
HDAC6-222ENST00000478095 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.09□□□□□ -0.15
HDAC6-222ENST00000478095 A0A0G2JS52 829 aa14.08□□□□□ -0.16
HDAC6-222ENST00000478095 CSB-PGBD3P0DP91 1061 aa14.08□□□□□ -0.16
HDAC6-222ENST00000478095 MYT1Q01538 1121 aa14.08□□□□□ -0.16
HDAC6-222ENST00000478095 CNGB1Q14028 1251 aaPredicted RBP14.08□□□□□ -0.16
HDAC6-222ENST00000478095 SPATA31A1Q5TZJ5 1347 aa14.08□□□□□ -0.16
HDAC6-222ENST00000478095 CDK12Q9NYV4 1490 aaPredicted RBP14.07□□□□□ -0.16
HDAC6-222ENST00000478095 AMPHP49418 695 aa14.07□□□□□ -0.16
HDAC6-222ENST00000478095 TOM1L2Q6ZVM7 507 aa14.07□□□□□ -0.16
HDAC6-222ENST00000478095 HOXC9P31274 260 aa14.06□□□□□ -0.16
HDAC6-222ENST00000478095 AMER1Q5JTC6 1135 aaPredicted RBP14.06□□□□□ -0.16
HDAC6-222ENST00000478095 SEPT12Q8IYM1 358 aa14.06□□□□□ -0.16
HDAC6-222ENST00000478095 LTV1Q96GA3 475 aaPredicted RBP14.06□□□□□ -0.16
HDAC6-222ENST00000478095 WDR17Q8IZU2 1322 aa14.06□□□□□ -0.16
HDAC6-222ENST00000478095 PER1O15534 1290 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-222ENST00000478095 ANKRD24Q8TF21 1146 aa14.05□□□□□ -0.16
HDAC6-222ENST00000478095 IP6K1Q92551 441 aa14.05□□□□□ -0.16
HDAC6-222ENST00000478095 EMILIN1Q9Y6C2 1016 aa14.05□□□□□ -0.16
HDAC6-222ENST00000478095 KIF20BQ96Q89 1820 aa14.05□□□□□ -0.16
HDAC6-222ENST00000478095 NSD2O96028 1365 aa14.05□□□□□ -0.16
HDAC6-222ENST00000478095 CRB1P82279 1406 aa14.05□□□□□ -0.16
HDAC6-222ENST00000478095 COL18A1P39060 1754 aa14.04□□□□□ -0.16
HDAC6-222ENST00000478095 PPM1GO15355 546 aaPredicted RBP14.04□□□□□ -0.16
HDAC6-222ENST00000478095 CC2D1BQ5T0F9 858 aaKnown RBP14.04□□□□□ -0.16
HDAC6-222ENST00000478095 MORC1Q86VD1 984 aa14.04□□□□□ -0.16
HDAC6-222ENST00000478095 TCP11L2Q8N4U5 519 aa14.04□□□□□ -0.16
HDAC6-222ENST00000478095 ERBB3P21860 1342 aa14.04□□□□□ -0.16
HDAC6-222ENST00000478095 ABCC6O95255 1503 aa14.04□□□□□ -0.16
HDAC6-222ENST00000478095 SOCS7O14512 581 aa14.03□□□□□ -0.16
HDAC6-222ENST00000478095 NLRP2Q9NX02 1062 aa14.03□□□□□ -0.16
HDAC6-222ENST00000478095 BLMP54132 1417 aaPredicted RBP14.03□□□□□ -0.16
HDAC6-222ENST00000478095 RTL1A6NKG5 1358 aa14.02□□□□□ -0.17
HDAC6-222ENST00000478095 ONECUT3O60422 494 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-222ENST00000478095 HSP90AB2PQ58FF8 381 aa14.02□□□□□ -0.17
HDAC6-222ENST00000478095 FLT4P35916 1363 aa14.01□□□□□ -0.17
HDAC6-222ENST00000478095 BARGINQ6ZT62 677 aa14.01□□□□□ -0.17
HDAC6-222ENST00000478095 POLKQ9UBT6 870 aa14.01□□□□□ -0.17
HDAC6-222ENST00000478095 CARD10Q9BWT7 1032 aa14□□□□□ -0.17
HDAC6-222ENST00000478095 THRAP3Q9Y2W1 955 aaKnown RBP14□□□□□ -0.17
HDAC6-222ENST00000478095 LTN1O94822 1766 aa14□□□□□ -0.17
HDAC6-222ENST00000478095 PEAK1Q9H792 1746 aa13.98□□□□□ -0.17
HDAC6-222ENST00000478095 INSRP06213 1382 aa13.98□□□□□ -0.17
HDAC6-222ENST00000478095 DDX10Q13206 875 aaKnown RBP13.98□□□□□ -0.17
HDAC6-222ENST00000478095 FAM182BQ5T319 152 aa13.98□□□□□ -0.17
HDAC6-222ENST00000478095 KRT27Q7Z3Y8 459 aa13.98□□□□□ -0.17
HDAC6-222ENST00000478095 USHBP1Q8N6Y0 703 aa13.98□□□□□ -0.17
HDAC6-222ENST00000478095 SMG6Q86US8 1419 aaKnown RBP13.98□□□□□ -0.17
HDAC6-222ENST00000478095 KIF24Q5T7B8 1368 aa13.97□□□□□ -0.17
HDAC6-222ENST00000478095 THSD7AQ9UPZ6 1657 aa13.97□□□□□ -0.17
HDAC6-222ENST00000478095 NPC1L1Q9UHC9 1359 aa13.96□□□□□ -0.17
HDAC6-222ENST00000478095 NBPF6Q5VWK0 638 aa13.96□□□□□ -0.17
HDAC6-222ENST00000478095 NBPF4Q96M43 638 aa13.96□□□□□ -0.17
HDAC6-222ENST00000478095 RGPD5Q99666 1765 aa13.96□□□□□ -0.18
HDAC6-222ENST00000478095 ANKRD26Q9UPS8 1709 aa13.95□□□□□ -0.18
HDAC6-222ENST00000478095 DISP2A7MBM2 1401 aa13.95□□□□□ -0.18
HDAC6-222ENST00000478095 PDE3BQ13370 1112 aa13.94□□□□□ -0.18
HDAC6-222ENST00000478095 DDB1Q16531 1140 aa13.94□□□□□ -0.18
HDAC6-222ENST00000478095 UPF1Q92900 1129 aaKnown RBP eCLIP13.94□□□□□ -0.18
HDAC6-222ENST00000478095 IL2RBP14784 551 aa13.93□□□□□ -0.18
HDAC6-222ENST00000478095 MTHFSP49914 203 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms