RNA–Protein interactions for RNA: ENST00000477529.1

SRRT-210, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-210ENST00000477529 VIRMAQ69YN4 1812 aaKnown RBP19.66■□□□□ 0.74
SRRT-210ENST00000477529 AATKQ6ZMQ8 1374 aa19.65■□□□□ 0.74
SRRT-210ENST00000477529 SPATA31A5Q5VU36 1347 aa19.63■□□□□ 0.73
SRRT-210ENST00000477529 SPATA31A7Q8IWB4 1347 aa19.63■□□□□ 0.73
SRRT-210ENST00000477529 KCNH5Q8NCM2 988 aa19.63■□□□□ 0.73
SRRT-210ENST00000477529 CCDC9Q9Y3X0 531 aaKnown RBP19.63■□□□□ 0.73
SRRT-210ENST00000477529 NSD3Q9BZ95 1437 aa19.62■□□□□ 0.73
SRRT-210ENST00000477529 SOX12O15370 315 aa19.61■□□□□ 0.73
SRRT-210ENST00000477529 CRB1P82279 1406 aa19.6■□□□□ 0.73
SRRT-210ENST00000477529 ARHGEF25Q86VW2 580 aa19.6■□□□□ 0.73
SRRT-210ENST00000477529 STRN4Q9NRL3 753 aa19.6■□□□□ 0.73
SRRT-210ENST00000477529 SPATA31A1Q5TZJ5 1347 aa19.59■□□□□ 0.73
SRRT-210ENST00000477529 ZBTB7CA1YPR0 619 aa19.59■□□□□ 0.73
SRRT-210ENST00000477529 ONECUT3O60422 494 aaPredicted RBP19.58■□□□□ 0.72
SRRT-210ENST00000477529 C11orf95C9JLR9 678 aaPredicted RBP19.56■□□□□ 0.72
SRRT-210ENST00000477529 FAM98CQ17RN3 349 aaKnown RBP19.56■□□□□ 0.72
SRRT-210ENST00000477529 LARP1Q6PKG0 1096 aaKnown RBP19.56■□□□□ 0.72
SRRT-210ENST00000477529 AXIN2Q9Y2T1 843 aa19.56■□□□□ 0.72
SRRT-210ENST00000477529 RGPD3A6NKT7 1758 aaPredicted RBP19.55■□□□□ 0.72
SRRT-210ENST00000477529 RGPD4Q7Z3J3 1758 aa19.55■□□□□ 0.72
SRRT-210ENST00000477529 SEPT12Q8IYM1 358 aa19.55■□□□□ 0.72
SRRT-210ENST00000477529 POLR3GLQ9BT43 218 aa19.55■□□□□ 0.72
SRRT-210ENST00000477529 CARD14Q9BXL6 1004 aa19.55■□□□□ 0.72
SRRT-210ENST00000477529 BLMP54132 1417 aaPredicted RBP19.54■□□□□ 0.72
SRRT-210ENST00000477529 FYB1O15117 783 aa19.54■□□□□ 0.72
SRRT-210ENST00000477529 UPF1Q92900 1129 aaKnown RBP eCLIP19.54■□□□□ 0.72
SRRT-210ENST00000477529 COG3Q96JB2 828 aa19.54■□□□□ 0.72
SRRT-210ENST00000477529 WDR17Q8IZU2 1322 aa19.53■□□□□ 0.72
SRRT-210ENST00000477529 RREB1Q92766 1687 aa19.53■□□□□ 0.72
SRRT-210ENST00000477529 EVA1CP58658 441 aa19.53■□□□□ 0.72
SRRT-210ENST00000477529 PKD1L3Q7Z443 1732 aa19.52■□□□□ 0.72
SRRT-210ENST00000477529 GGNBP2Q9H3C7 697 aa19.52■□□□□ 0.72
SRRT-210ENST00000477529 USP35Q9P2H5 1018 aa19.52■□□□□ 0.72
SRRT-210ENST00000477529 KIF7Q2M1P5 1343 aa19.51■□□□□ 0.71
SRRT-210ENST00000477529 DOT1LQ8TEK3 1739 aa19.51■□□□□ 0.71
SRRT-210ENST00000477529 ITGB4P16144 1822 aa19.51■□□□□ 0.71
SRRT-210ENST00000477529 NHSQ6T4R5 1651 aa19.5■□□□□ 0.71
SRRT-210ENST00000477529 RTL1A6NKG5 1358 aa19.5■□□□□ 0.71
SRRT-210ENST00000477529 A0A0G2JS52 829 aa19.5■□□□□ 0.71
SRRT-210ENST00000477529 MYT1Q01538 1121 aa19.5■□□□□ 0.71
SRRT-210ENST00000477529 BARGINQ6ZT62 677 aa19.5■□□□□ 0.71
SRRT-210ENST00000477529 BTAF1O14981 1849 aa19.5■□□□□ 0.71
SRRT-210ENST00000477529 DISP2A7MBM2 1401 aa19.5■□□□□ 0.71
SRRT-210ENST00000477529 ERBB3P21860 1342 aa19.5■□□□□ 0.71
SRRT-210ENST00000477529 NUP188Q5SRE5 1749 aa19.49■□□□□ 0.71
SRRT-210ENST00000477529 TCP11L2Q8N4U5 519 aa19.49■□□□□ 0.71
SRRT-210ENST00000477529 MAP3K19Q56UN5 1328 aa19.48■□□□□ 0.71
SRRT-210ENST00000477529 KRT27Q7Z3Y8 459 aa19.47■□□□□ 0.71
SRRT-210ENST00000477529 THRAP3Q9Y2W1 955 aaKnown RBP19.47■□□□□ 0.71
SRRT-210ENST00000477529 CGNL1Q0VF96 1302 aa19.47■□□□□ 0.71
SRRT-210ENST00000477529 CCDC7Q96M83 1385 aa19.46■□□□□ 0.71
SRRT-210ENST00000477529 FBLN1P23142 703 aa19.46■□□□□ 0.71
SRRT-210ENST00000477529 TOM1L2Q6ZVM7 507 aa19.46■□□□□ 0.71
SRRT-210ENST00000477529 PANK3Q9H999 370 aa19.45■□□□□ 0.7
SRRT-210ENST00000477529 TNS2Q63HR2 1409 aa19.44■□□□□ 0.7
SRRT-210ENST00000477529 IP6K1Q92551 441 aa19.44■□□□□ 0.7
SRRT-210ENST00000477529 NSD2O96028 1365 aa19.44■□□□□ 0.7
SRRT-210ENST00000477529 KIF24Q5T7B8 1368 aa19.44■□□□□ 0.7
SRRT-210ENST00000477529 CSB-PGBD3P0DP91 1061 aa19.43■□□□□ 0.7
SRRT-210ENST00000477529 HOXC9P31274 260 aa19.43■□□□□ 0.7
SRRT-210ENST00000477529 RRS1Q15050 365 aaKnown RBP19.43■□□□□ 0.7
SRRT-210ENST00000477529 CARD10Q9BWT7 1032 aa19.43■□□□□ 0.7
SRRT-210ENST00000477529 FLT4P35916 1363 aa19.43■□□□□ 0.7
SRRT-210ENST00000477529 WASHC2AQ641Q2 1341 aa19.42■□□□□ 0.7
SRRT-210ENST00000477529 TOGARAM1Q9Y4F4 1720 aa19.42■□□□□ 0.7
SRRT-210ENST00000477529 ANKRD24Q8TF21 1146 aa19.41■□□□□ 0.7
SRRT-210ENST00000477529 SMG6Q86US8 1419 aaKnown RBP19.41■□□□□ 0.7
SRRT-210ENST00000477529 FAM182BQ5T319 152 aa19.4■□□□□ 0.7
SRRT-210ENST00000477529 OVOS2A0A0G2JMS6 1433 aa19.39■□□□□ 0.69
SRRT-210ENST00000477529 LY75O60449 1722 aa19.39■□□□□ 0.69
SRRT-210ENST00000477529 INSRP06213 1382 aa19.38■□□□□ 0.69
SRRT-210ENST00000477529 AMPHP49418 695 aa19.38■□□□□ 0.69
SRRT-210ENST00000477529 MEGF6O75095 1541 aa19.37■□□□□ 0.69
SRRT-210ENST00000477529 NLRP2Q9NX02 1062 aa19.37■□□□□ 0.69
SRRT-210ENST00000477529 TAF1LQ8IZX4 1826 aa19.37■□□□□ 0.69
SRRT-210ENST00000477529 NCAPD2Q15021 1401 aa19.36■□□□□ 0.69
SRRT-210ENST00000477529 CCDC125Q86Z20 511 aa19.36■□□□□ 0.69
SRRT-210ENST00000477529 LTV1Q96GA3 475 aaPredicted RBP19.36■□□□□ 0.69
SRRT-210ENST00000477529 EMILIN1Q9Y6C2 1016 aa19.36■□□□□ 0.69
SRRT-210ENST00000477529 TUBGCP6Q96RT7 1819 aa19.35■□□□□ 0.69
SRRT-210ENST00000477529 CDCA7Q9BWT1 371 aaPredicted RBP19.35■□□□□ 0.69
SRRT-210ENST00000477529 SCN11AQ9UI33 1791 aa19.34■□□□□ 0.69
SRRT-210ENST00000477529 PDE3BQ13370 1112 aa19.34■□□□□ 0.69
SRRT-210ENST00000477529 DDB1Q16531 1140 aa19.34■□□□□ 0.69
SRRT-210ENST00000477529 HSP90AB2PQ58FF8 381 aa19.33■□□□□ 0.68
SRRT-210ENST00000477529 AMER1Q5JTC6 1135 aaPredicted RBP19.33■□□□□ 0.68
SRRT-210ENST00000477529 BCL9O00512 1426 aa19.33■□□□□ 0.68
SRRT-210ENST00000477529 KNSTRNQ9Y448 316 aa19.32■□□□□ 0.68
SRRT-210ENST00000477529 PER1O15534 1290 aaPredicted RBP19.31■□□□□ 0.68
SRRT-210ENST00000477529 IL2RBP14784 551 aa19.31■□□□□ 0.68
SRRT-210ENST00000477529 FAM196AQ6ZSG2 479 aa19.31■□□□□ 0.68
SRRT-210ENST00000477529 DLG5Q8TDM6 1919 aa19.3■□□□□ 0.68
SRRT-210ENST00000477529 TNNT2P45379 298 aaPredicted RBP19.3■□□□□ 0.68
SRRT-210ENST00000477529 POLKQ9UBT6 870 aa19.3■□□□□ 0.68
SRRT-210ENST00000477529 QSER1Q2KHR3 1735 aa19.3■□□□□ 0.68
SRRT-210ENST00000477529 NPC1L1Q9UHC9 1359 aa19.29■□□□□ 0.68
SRRT-210ENST00000477529 NBPF6Q5VWK0 638 aa19.28■□□□□ 0.68
SRRT-210ENST00000477529 DEFB132Q7Z7B7 95 aa19.28■□□□□ 0.68
SRRT-210ENST00000477529 MARCH10Q8NA82 808 aaPredicted RBP19.28■□□□□ 0.68
SRRT-210ENST00000477529 NBPF4Q96M43 638 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms