RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 LMO7Q8WWI1 1683 aa24.4■■□□□ 1.5
SMIM4-202ENST00000476842 ONECUT3O60422 494 aaPredicted RBP24.4■■□□□ 1.5
SMIM4-202ENST00000476842 LARP1Q6PKG0 1096 aaKnown RBP24.4■■□□□ 1.5
SMIM4-202ENST00000476842 IP6K1Q92551 441 aa24.4■■□□□ 1.5
SMIM4-202ENST00000476842 MAP3K19Q56UN5 1328 aa24.39■■□□□ 1.5
SMIM4-202ENST00000476842 NSD2O96028 1365 aa24.39■■□□□ 1.49
SMIM4-202ENST00000476842 SPATA31A1Q5TZJ5 1347 aa24.38■■□□□ 1.49
SMIM4-202ENST00000476842 AMER1Q5JTC6 1135 aaPredicted RBP24.38■■□□□ 1.49
SMIM4-202ENST00000476842 NRAPQ86VF7 1730 aa24.38■■□□□ 1.49
SMIM4-202ENST00000476842 COL5A2P05997 1499 aaPredicted RBP24.38■■□□□ 1.49
SMIM4-202ENST00000476842 RRS1Q15050 365 aaKnown RBP24.37■■□□□ 1.49
SMIM4-202ENST00000476842 COL18A1P39060 1754 aa24.37■■□□□ 1.49
SMIM4-202ENST00000476842 AMPHP49418 695 aa24.36■■□□□ 1.49
SMIM4-202ENST00000476842 ABCC6O95255 1503 aa24.35■■□□□ 1.49
SMIM4-202ENST00000476842 WDR17Q8IZU2 1322 aa24.35■■□□□ 1.49
SMIM4-202ENST00000476842 GLI3P10071 1580 aa24.34■■□□□ 1.49
SMIM4-202ENST00000476842 HOXC9P31274 260 aa24.34■■□□□ 1.49
SMIM4-202ENST00000476842 KIF20BQ96Q89 1820 aa24.33■■□□□ 1.49
SMIM4-202ENST00000476842 FAM98CQ17RN3 349 aaKnown RBP24.33■■□□□ 1.49
SMIM4-202ENST00000476842 TOM1L2Q6ZVM7 507 aa24.33■■□□□ 1.49
SMIM4-202ENST00000476842 MORC1Q86VD1 984 aa24.33■■□□□ 1.49
SMIM4-202ENST00000476842 THRAP3Q9Y2W1 955 aaKnown RBP24.33■■□□□ 1.49
SMIM4-202ENST00000476842 RGS12O14924 1447 aa24.33■■□□□ 1.49
SMIM4-202ENST00000476842 CSB-PGBD3P0DP91 1061 aa24.32■■□□□ 1.48
SMIM4-202ENST00000476842 SEPT12Q8IYM1 358 aa24.32■■□□□ 1.48
SMIM4-202ENST00000476842 ANKRD24Q8TF21 1146 aa24.32■■□□□ 1.48
SMIM4-202ENST00000476842 CRB1P82279 1406 aa24.32■■□□□ 1.48
SMIM4-202ENST00000476842 BLMP54132 1417 aaPredicted RBP24.31■■□□□ 1.48
SMIM4-202ENST00000476842 BARGINQ6ZT62 677 aa24.31■■□□□ 1.48
SMIM4-202ENST00000476842 TCP11L2Q8N4U5 519 aa24.31■■□□□ 1.48
SMIM4-202ENST00000476842 USP35Q9P2H5 1018 aa24.31■■□□□ 1.48
SMIM4-202ENST00000476842 ERBB3P21860 1342 aa24.31■■□□□ 1.48
SMIM4-202ENST00000476842 RTL1A6NKG5 1358 aa24.3■■□□□ 1.48
SMIM4-202ENST00000476842 KIF24Q5T7B8 1368 aa24.3■■□□□ 1.48
SMIM4-202ENST00000476842 TNNT2P45379 298 aaPredicted RBP24.3■■□□□ 1.48
SMIM4-202ENST00000476842 CARD10Q9BWT7 1032 aa24.3■■□□□ 1.48
SMIM4-202ENST00000476842 POLKQ9UBT6 870 aa24.3■■□□□ 1.48
SMIM4-202ENST00000476842 NPC1L1Q9UHC9 1359 aa24.29■■□□□ 1.48
SMIM4-202ENST00000476842 EMILIN1Q9Y6C2 1016 aa24.29■■□□□ 1.48
SMIM4-202ENST00000476842 SOCS7O14512 581 aa24.28■■□□□ 1.48
SMIM4-202ENST00000476842 CC2D1BQ5T0F9 858 aaKnown RBP24.27■■□□□ 1.48
SMIM4-202ENST00000476842 HSP90AB2PQ58FF8 381 aa24.26■■□□□ 1.47
SMIM4-202ENST00000476842 FLT4P35916 1363 aa24.26■■□□□ 1.47
SMIM4-202ENST00000476842 LTN1O94822 1766 aa24.25■■□□□ 1.47
SMIM4-202ENST00000476842 LTV1Q96GA3 475 aaPredicted RBP24.25■■□□□ 1.47
SMIM4-202ENST00000476842 NLRP2Q9NX02 1062 aa24.25■■□□□ 1.47
SMIM4-202ENST00000476842 INSRP06213 1382 aa24.25■■□□□ 1.47
SMIM4-202ENST00000476842 A0A0G2JS52 829 aa24.24■■□□□ 1.47
SMIM4-202ENST00000476842 PPM1GO15355 546 aaPredicted RBP24.24■■□□□ 1.47
SMIM4-202ENST00000476842 MYT1Q01538 1121 aa24.24■■□□□ 1.47
SMIM4-202ENST00000476842 DDX10Q13206 875 aaKnown RBP24.21■■□□□ 1.47
SMIM4-202ENST00000476842 KRT27Q7Z3Y8 459 aa24.21■■□□□ 1.47
SMIM4-202ENST00000476842 CDCA7Q9BWT1 371 aaPredicted RBP24.21■■□□□ 1.47
SMIM4-202ENST00000476842 RGPD5Q99666 1765 aa24.21■■□□□ 1.47
SMIM4-202ENST00000476842 ANKRD26Q9UPS8 1709 aa24.21■■□□□ 1.47
SMIM4-202ENST00000476842 CNGB1Q14028 1251 aaPredicted RBP24.18■■□□□ 1.46
SMIM4-202ENST00000476842 ZNF316A6NFI3 1004 aaPredicted RBP24.17■■□□□ 1.46
SMIM4-202ENST00000476842 NBPF6Q5VWK0 638 aa24.17■■□□□ 1.46
SMIM4-202ENST00000476842 NBPF4Q96M43 638 aa24.17■■□□□ 1.46
SMIM4-202ENST00000476842 PEAK1Q9H792 1746 aa24.17■■□□□ 1.46
SMIM4-202ENST00000476842 SMG6Q86US8 1419 aaKnown RBP24.17■■□□□ 1.46
SMIM4-202ENST00000476842 THSD7AQ9UPZ6 1657 aa24.15■■□□□ 1.46
SMIM4-202ENST00000476842 PDE3BQ13370 1112 aa24.15■■□□□ 1.46
SMIM4-202ENST00000476842 DISP2A7MBM2 1401 aa24.14■■□□□ 1.45
SMIM4-202ENST00000476842 IL2RBP14784 551 aa24.14■■□□□ 1.45
SMIM4-202ENST00000476842 MTHFSP49914 203 aa24.14■■□□□ 1.45
SMIM4-202ENST00000476842 DDB1Q16531 1140 aa24.13■■□□□ 1.45
SMIM4-202ENST00000476842 EXOC5O00471 708 aa24.12■■□□□ 1.45
SMIM4-202ENST00000476842 EIF4A2Q14240 407 aaKnown RBP24.12■■□□□ 1.45
SMIM4-202ENST00000476842 UPF1Q92900 1129 aaKnown RBP eCLIP24.12■■□□□ 1.45
SMIM4-202ENST00000476842 MAP2P11137 1827 aaKnown RBP24.12■■□□□ 1.45
SMIM4-202ENST00000476842 EYA1Q99502 592 aa24.1■■□□□ 1.45
SMIM4-202ENST00000476842 USHBP1Q8N6Y0 703 aa24.09■■□□□ 1.45
SMIM4-202ENST00000476842 FAM182BQ5T319 152 aa24.08■■□□□ 1.45
SMIM4-202ENST00000476842 FAM196AQ6ZSG2 479 aa24.07■■□□□ 1.44
SMIM4-202ENST00000476842 FAM208AQ9UK61 1670 aaKnown RBP24.07■■□□□ 1.44
SMIM4-202ENST00000476842 BRWD3Q6RI45 1802 aa24.06■■□□□ 1.44
SMIM4-202ENST00000476842 PPP2R1AP30153 589 aa24.05■■□□□ 1.44
SMIM4-202ENST00000476842 IL13P35225 146 aa24.05■■□□□ 1.44
SMIM4-202ENST00000476842 CCDC125Q86Z20 511 aa24.05■■□□□ 1.44
SMIM4-202ENST00000476842 MARCH10Q8NA82 808 aaPredicted RBP24.05■■□□□ 1.44
SMIM4-202ENST00000476842 RAPGEF4Q8WZA2 1011 aa24.05■■□□□ 1.44
SMIM4-202ENST00000476842 PARP4Q9UKK3 1724 aaKnown RBP24.04■■□□□ 1.44
SMIM4-202ENST00000476842 NCAPD2Q15021 1401 aa24.03■■□□□ 1.44
SMIM4-202ENST00000476842 TATP17735 454 aaPredicted RBP24.03■■□□□ 1.44
SMIM4-202ENST00000476842 PARD3Q8TEW0 1356 aa24.03■■□□□ 1.44
SMIM4-202ENST00000476842 ZCRB1Q8TBF4 217 aaKnown RBP24.02■■□□□ 1.44
SMIM4-202ENST00000476842 IGSF1Q8N6C5 1336 aa24.02■■□□□ 1.44
SMIM4-202ENST00000476842 DIAPH1O60610 1272 aaKnown RBP24.01■■□□□ 1.43
SMIM4-202ENST00000476842 RALBP1Q15311 655 aa24.01■■□□□ 1.43
SMIM4-202ENST00000476842 TNS2Q63HR2 1409 aa24.01■■□□□ 1.43
SMIM4-202ENST00000476842 MEGF6O75095 1541 aa23.99■■□□□ 1.43
SMIM4-202ENST00000476842 LRRC37A3O60309 1634 aa23.99■■□□□ 1.43
SMIM4-202ENST00000476842 CFAP53Q96M91 514 aa23.98■■□□□ 1.43
SMIM4-202ENST00000476842 OVOS2A0A0G2JMS6 1433 aa23.98■■□□□ 1.43
SMIM4-202ENST00000476842 RGPD2P0DJD1 1756 aa23.98■■□□□ 1.43
SMIM4-202ENST00000476842 DDX54Q8TDD1 881 aaKnown RBP23.97■■□□□ 1.43
SMIM4-202ENST00000476842 WNK3Q9BYP7 1800 aa23.97■■□□□ 1.43
SMIM4-202ENST00000476842 EP400Q96L91 3159 aa23.97■■□□□ 1.43
SMIM4-202ENST00000476842 BCL9O00512 1426 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms