RNA–Protein interactions for RNA: ENST00000475717.1

TOP2B-206, Transcript of DNA topoisomerase II beta, humanhuman

TSL 4

Gene TOP2B, Length 540 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-206ENST00000475717 CTC1Q2NKJ3 1217 aa9.47□□□□□ -0.89
TOP2B-206ENST00000475717 CRIPAKQ8N1N5 446 aa9.47□□□□□ -0.89
TOP2B-206ENST00000475717 TLL2Q9Y6L7 1015 aa9.47□□□□□ -0.89
TOP2B-206ENST00000475717 RFX1P22670 979 aa9.46□□□□□ -0.9
TOP2B-206ENST00000475717 EIF4G2P78344 907 aaKnown RBP eCLIP9.46□□□□□ -0.9
TOP2B-206ENST00000475717 SEMA3FQ13275 785 aa9.46□□□□□ -0.9
TOP2B-206ENST00000475717 UCN2Q96RP3 112 aa9.46□□□□□ -0.9
TOP2B-206ENST00000475717 WASF2Q9Y6W5 498 aa9.46□□□□□ -0.9
TOP2B-206ENST00000475717 PALM3A6NDB9 673 aaPredicted RBP9.45□□□□□ -0.9
TOP2B-206ENST00000475717 SIAH2O43255 324 aa9.45□□□□□ -0.9
TOP2B-206ENST00000475717 NR1H3Q13133 447 aa9.45□□□□□ -0.9
TOP2B-206ENST00000475717 AGERQ15109 404 aa9.45□□□□□ -0.9
TOP2B-206ENST00000475717 KCTD17Q8N5Z5 321 aa9.45□□□□□ -0.9
TOP2B-206ENST00000475717 FOXJ1Q92949 421 aa9.45□□□□□ -0.9
TOP2B-206ENST00000475717 FKBPLQ9UIM3 349 aa9.45□□□□□ -0.9
TOP2B-206ENST00000475717 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.44□□□□□ -0.9
TOP2B-206ENST00000475717 ZC3H4Q9UPT8 1303 aaKnown RBP9.44□□□□□ -0.9
TOP2B-206ENST00000475717 ZBBXA8MT70 800 aa9.43□□□□□ -0.9
TOP2B-206ENST00000475717 VARSP26640 1264 aaKnown RBP9.43□□□□□ -0.9
TOP2B-206ENST00000475717 SMCPP49901 116 aaPredicted RBP9.43□□□□□ -0.9
TOP2B-206ENST00000475717 PDE4CQ08493 712 aa9.43□□□□□ -0.9
TOP2B-206ENST00000475717 FBXO45P0C2W1 286 aa9.42□□□□□ -0.9
TOP2B-206ENST00000475717 LMOD1P29536 600 aaPredicted RBP9.42□□□□□ -0.9
TOP2B-206ENST00000475717 SRPK2P78362 688 aaKnown RBP9.42□□□□□ -0.9
TOP2B-206ENST00000475717 GMPR2Q9P2T1 348 aaKnown RBP9.42□□□□□ -0.9
TOP2B-206ENST00000475717 FAM174AQ8TBP5 190 aa9.41□□□□□ -0.9
TOP2B-206ENST00000475717 TFIP11Q9UBB9 837 aaKnown RBP9.41□□□□□ -0.9
TOP2B-206ENST00000475717 ARID5BQ14865 1188 aa9.4□□□□□ -0.9
TOP2B-206ENST00000475717 ARMC2Q8NEN0 867 aa9.4□□□□□ -0.9
TOP2B-206ENST00000475717 AEBP1Q8IUX7 1158 aa9.39□□□□□ -0.91
TOP2B-206ENST00000475717 ATP13A2Q9NQ11 1180 aa9.39□□□□□ -0.91
TOP2B-206ENST00000475717 USTQ9Y2C2 406 aa9.39□□□□□ -0.91
TOP2B-206ENST00000475717 MAFBQ9Y5Q3 323 aaPredicted RBP9.39□□□□□ -0.91
TOP2B-206ENST00000475717 C11orf95C9JLR9 678 aaPredicted RBP9.38□□□□□ -0.91
TOP2B-206ENST00000475717 CSB-PGBD3P0DP91 1061 aa9.38□□□□□ -0.91
TOP2B-206ENST00000475717 NBPF14Q5TI25 921 aa9.38□□□□□ -0.91
TOP2B-206ENST00000475717 TBC1D9Q6ZT07 1266 aa9.38□□□□□ -0.91
TOP2B-206ENST00000475717 ZNF775Q96BV0 537 aaPredicted RBP9.38□□□□□ -0.91
TOP2B-206ENST00000475717 MAGEB6P1A0A0J9YX57 407 aa9.37□□□□□ -0.91
TOP2B-206ENST00000475717 ATP9BO43861 1147 aa9.37□□□□□ -0.91
TOP2B-206ENST00000475717 NNTQ13423 1086 aa9.37□□□□□ -0.91
TOP2B-206ENST00000475717 C4orf48Q5BLP8 95 aa9.37□□□□□ -0.91
TOP2B-206ENST00000475717 BPHLQ86WA6 291 aaPredicted RBP9.37□□□□□ -0.91
TOP2B-206ENST00000475717 GPKOWQ92917 476 aaPredicted RBP eCLIP9.37□□□□□ -0.914e-6■■□□□ 12.9
TOP2B-206ENST00000475717 CAPN5O15484 640 aaPredicted RBP9.36□□□□□ -0.91
TOP2B-206ENST00000475717 CARD14Q9BXL6 1004 aa9.36□□□□□ -0.91
TOP2B-206ENST00000475717 GPSM3Q9Y4H4 160 aa9.36□□□□□ -0.91
TOP2B-206ENST00000475717 BMP1P13497 986 aa9.35□□□□□ -0.91
TOP2B-206ENST00000475717 ADH1CP00326 375 aa9.34□□□□□ -0.91
TOP2B-206ENST00000475717 PTK2Q05397 1052 aa9.34□□□□□ -0.91
TOP2B-206ENST00000475717 PDXDC2PQ6P474 469 aa9.34□□□□□ -0.91
TOP2B-206ENST00000475717 NFATC2IPQ8NCF5 419 aa9.34□□□□□ -0.91
TOP2B-206ENST00000475717 ZNF592Q92610 1267 aa9.34□□□□□ -0.91
TOP2B-206ENST00000475717 CCDC9Q9Y3X0 531 aaKnown RBP9.34□□□□□ -0.91
TOP2B-206ENST00000475717 PIK3CDO00329 1044 aa9.33□□□□□ -0.92
TOP2B-206ENST00000475717 ATG7O95352 703 aa9.33□□□□□ -0.92
TOP2B-206ENST00000475717 SNRPBP14678 240 aaKnown RBP9.32□□□□□ -0.92
TOP2B-206ENST00000475717 CDCA8Q53HL2 280 aa9.32□□□□□ -0.92
TOP2B-206ENST00000475717 SH3BP5LQ7L8J4 393 aa9.32□□□□□ -0.92
TOP2B-206ENST00000475717 MPNDQ8N594 471 aa9.32□□□□□ -0.92
TOP2B-206ENST00000475717 SENP2Q9HC62 589 aa9.32□□□□□ -0.92
TOP2B-206ENST00000475717 WDR4P57081 412 aaKnown RBP9.31□□□□□ -0.92
TOP2B-206ENST00000475717 CDK15Q96Q40 435 aa9.31□□□□□ -0.92
TOP2B-206ENST00000475717 PATL2C9JE40 543 aaKnown RBP9.3□□□□□ -0.92
TOP2B-206ENST00000475717 SKIP12755 728 aa9.3□□□□□ -0.92
TOP2B-206ENST00000475717 MCCD1P59942 119 aaPredicted RBP9.3□□□□□ -0.92
TOP2B-206ENST00000475717 TRIM46Q7Z4K8 759 aa9.3□□□□□ -0.92
TOP2B-206ENST00000475717 SH3RF1Q7Z6J0 888 aa9.3□□□□□ -0.92
TOP2B-206ENST00000475717 TRIM47Q96LD4 638 aa9.3□□□□□ -0.92
TOP2B-206ENST00000475717 OCSTAMPQ9BR26 566 aa9.3□□□□□ -0.92
TOP2B-206ENST00000475717 ARHGAP9Q9BRR9 750 aa9.3□□□□□ -0.92
TOP2B-206ENST00000475717 C1QTNF2Q9BXJ5 285 aa9.3□□□□□ -0.92
TOP2B-206ENST00000475717 VRTNQ9H8Y1 702 aa9.3□□□□□ -0.92
TOP2B-206ENST00000475717 USP17L3A6NCW0 530 aa9.29□□□□□ -0.92
TOP2B-206ENST00000475717 USP17L4A6NCW7 530 aa9.29□□□□□ -0.92
TOP2B-206ENST00000475717 USP17L5A8MUK1 530 aa9.29□□□□□ -0.92
TOP2B-206ENST00000475717 BRD1O95696 1058 aa9.29□□□□□ -0.92
TOP2B-206ENST00000475717 NR3C2P08235 984 aa9.29□□□□□ -0.92
TOP2B-206ENST00000475717 FSHRP23945 695 aa9.29□□□□□ -0.92
TOP2B-206ENST00000475717 USP17L2Q6R6M4 530 aa9.29□□□□□ -0.92
TOP2B-206ENST00000475717 VASH1Q7L8A9 365 aaPredicted RBP9.29□□□□□ -0.92
TOP2B-206ENST00000475717 USP17L1Q7RTZ2 530 aa9.29□□□□□ -0.92
TOP2B-206ENST00000475717 PLEKHM2Q8IWE5 1019 aa9.29□□□□□ -0.92
TOP2B-206ENST00000475717 PCDHB9Q9Y5E1 797 aa9.29□□□□□ -0.92
TOP2B-206ENST00000475717 TIMP2P16035 220 aa9.28□□□□□ -0.92
TOP2B-206ENST00000475717 SLFNL1Q499Z3 407 aa9.28□□□□□ -0.92
TOP2B-206ENST00000475717 KANK4Q5T7N3 995 aaPredicted RBP9.28□□□□□ -0.92
TOP2B-206ENST00000475717 ADAM32Q8TC27 787 aa9.28□□□□□ -0.92
TOP2B-206ENST00000475717 KIFC2Q96AC6 838 aa9.28□□□□□ -0.92
TOP2B-206ENST00000475717 CARNS1A5YM72 827 aa9.27□□□□□ -0.93
TOP2B-206ENST00000475717 TMEM88BA6NKF7 163 aa9.27□□□□□ -0.93
TOP2B-206ENST00000475717 ZIC2O95409 532 aaPredicted RBP9.27□□□□□ -0.93
TOP2B-206ENST00000475717 NR5A1Q13285 461 aa9.27□□□□□ -0.93
TOP2B-206ENST00000475717 ERFEQ4G0M1 354 aa9.27□□□□□ -0.93
TOP2B-206ENST00000475717 ZFAND3Q9H8U3 227 aa9.27□□□□□ -0.93
TOP2B-206ENST00000475717 CEP126Q9P2H0 1117 aa9.27□□□□□ -0.93
TOP2B-206ENST00000475717 GRM5P41594 1212 aa9.26□□□□□ -0.93
TOP2B-206ENST00000475717 KCNA1Q09470 495 aa9.26□□□□□ -0.93
TOP2B-206ENST00000475717 ELOAQ14241 798 aaKnown RBP9.26□□□□□ -0.93
TOP2B-206ENST00000475717 ZBTB33Q86T24 672 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms