RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 ZSCAN1Q8NBB4 408 aa8.96□□□□□ -0.98
TMEM50B-208ENST00000474272 EPS8L1Q8TE68 723 aa8.96□□□□□ -0.98
TMEM50B-208ENST00000474272 FKBPLQ9UIM3 349 aa8.96□□□□□ -0.98
TMEM50B-208ENST00000474272 DNMT3LQ9UJW3 386 aa8.96□□□□□ -0.98
TMEM50B-208ENST00000474272 SH3D19Q5HYK7 790 aa8.95□□□□□ -0.98
TMEM50B-208ENST00000474272 PPP1R26Q5T8A7 1209 aaPredicted RBP8.95□□□□□ -0.98
TMEM50B-208ENST00000474272 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.95□□□□□ -0.98
TMEM50B-208ENST00000474272 EMILIN1Q9Y6C2 1016 aa8.95□□□□□ -0.98
TMEM50B-208ENST00000474272 FIGNL2A6NMB9 653 aa8.94□□□□□ -0.98
TMEM50B-208ENST00000474272 PDXDC2PQ6P474 469 aa8.94□□□□□ -0.98
TMEM50B-208ENST00000474272 OCSTAMPQ9BR26 566 aa8.94□□□□□ -0.98
TMEM50B-208ENST00000474272 SOS2Q07890 1332 aaPredicted RBP8.94□□□□□ -0.98
TMEM50B-208ENST00000474272 PPFIA3O75145 1194 aa8.93□□□□□ -0.98
TMEM50B-208ENST00000474272 ZBTB33Q86T24 672 aa8.93□□□□□ -0.98
TMEM50B-208ENST00000474272 GPKOWQ92917 476 aaPredicted RBP eCLIP8.93□□□□□ -0.98
TMEM50B-208ENST00000474272 KCTD15Q96SI1 283 aaPredicted RBP8.93□□□□□ -0.98
TMEM50B-208ENST00000474272 DDRGK1Q96HY6 314 aa8.92□□□□□ -0.98
TMEM50B-208ENST00000474272 TSEN34Q9BSV6 310 aaKnown RBP8.92□□□□□ -0.98
TMEM50B-208ENST00000474272 HMX1Q9NP08 348 aaPredicted RBP8.92□□□□□ -0.98
TMEM50B-208ENST00000474272 PPP2R2DQ66LE6 453 aa8.91□□□□□ -0.98
TMEM50B-208ENST00000474272 SLC10A4Q96EP9 437 aa8.91□□□□□ -0.98
TMEM50B-208ENST00000474272 AGBL1Q96MI9 1066 aa8.91□□□□□ -0.98
TMEM50B-208ENST00000474272 TTLL8A6PVC2 850 aa8.9□□□□□ -0.98
TMEM50B-208ENST00000474272 RAB15P59190 212 aa8.9□□□□□ -0.98
TMEM50B-208ENST00000474272 ADAM32Q8TC27 787 aa8.89□□□□□ -0.99
TMEM50B-208ENST00000474272 PGPEP1Q9NXJ5 209 aa8.89□□□□□ -0.99
TMEM50B-208ENST00000474272 VSIG8P0DPA2 414 aa8.88□□□□□ -0.99
TMEM50B-208ENST00000474272 INTS6LQ5JSJ4 861 aaKnown RBP8.88□□□□□ -0.99
TMEM50B-208ENST00000474272 Q6ZVU0 165 aa8.88□□□□□ -0.99
TMEM50B-208ENST00000474272 TMPRSS4Q9NRS4 437 aa8.88□□□□□ -0.99
TMEM50B-208ENST00000474272 FAM181BA6NEQ2 426 aa8.87□□□□□ -0.99
TMEM50B-208ENST00000474272 USP17L8P0C7I0 530 aa8.87□□□□□ -0.99
TMEM50B-208ENST00000474272 RELBQ01201 579 aa8.87□□□□□ -0.99
TMEM50B-208ENST00000474272 PTSQ03393 145 aa8.87□□□□□ -0.99
TMEM50B-208ENST00000474272 PTK2Q05397 1052 aa8.87□□□□□ -0.99
TMEM50B-208ENST00000474272 GPR161Q8N6U8 529 aaKnown RBP8.87□□□□□ -0.99
TMEM50B-208ENST00000474272 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.86□□□□□ -0.99
TMEM50B-208ENST00000474272 ZNF395Q9H8N7 513 aaPredicted RBP8.86□□□□□ -0.99
TMEM50B-208ENST00000474272 SPINT1O43278 529 aa8.85□□□□□ -0.99
TMEM50B-208ENST00000474272 CTSOP43234 321 aaPredicted RBP8.85□□□□□ -0.99
TMEM50B-208ENST00000474272 BCANQ96GW7 911 aa8.85□□□□□ -0.99
TMEM50B-208ENST00000474272 INSM2Q96T92 566 aaPredicted RBP8.85□□□□□ -0.99
TMEM50B-208ENST00000474272 RFC5P40937 340 aa8.84□□□□□ -0.99
TMEM50B-208ENST00000474272 ZC3H4Q9UPT8 1303 aaKnown RBP8.83□□□□□ -1
TMEM50B-208ENST00000474272 KRT76Q01546 638 aa8.83□□□□□ -1
TMEM50B-208ENST00000474272 DHX9Q08211 1270 aaKnown RBP8.83□□□□□ -1
TMEM50B-208ENST00000474272 CDV3Q9UKY7 258 aaKnown RBP8.83□□□□□ -1
TMEM50B-208ENST00000474272 ADD1P35611 737 aaKnown RBP8.82□□□□□ -1
TMEM50B-208ENST00000474272 ZNF784Q8NCA9 323 aaPredicted RBP8.82□□□□□ -1
TMEM50B-208ENST00000474272 ERVH48-1M5A8F1 160 aa8.81□□□□□ -1
TMEM50B-208ENST00000474272 DZIP3Q86Y13 1208 aaKnown RBP8.81□□□□□ -1
TMEM50B-208ENST00000474272 CCDC155Q8N6L0 562 aa8.81□□□□□ -1
TMEM50B-208ENST00000474272 IL27Q8NEV9 243 aa8.81□□□□□ -1
TMEM50B-208ENST00000474272 CNTNAP3BQ96NU0 1288 aa8.81□□□□□ -1
TMEM50B-208ENST00000474272 TRIM34Q9BYJ4 488 aa8.81□□□□□ -1
TMEM50B-208ENST00000474272 CNTNAP3Q9BZ76 1288 aa8.81□□□□□ -1
TMEM50B-208ENST00000474272 POLMQ9NP87 494 aaPredicted RBP8.81□□□□□ -1
TMEM50B-208ENST00000474272 GPSM3Q9Y4H4 160 aa8.81□□□□□ -1
TMEM50B-208ENST00000474272 SLC35F4A4IF30 521 aa8.78□□□□□ -1
TMEM50B-208ENST00000474272 LILRA1O75019 489 aa8.78□□□□□ -1
TMEM50B-208ENST00000474272 NBPF20Q3BBV1 942 aa8.78□□□□□ -1
TMEM50B-208ENST00000474272 RNFT1Q5M7Z0 435 aa8.78□□□□□ -1
TMEM50B-208ENST00000474272 VWA5B2Q8N398 1253 aa8.78□□□□□ -1
TMEM50B-208ENST00000474272 KDF1Q8NAX2 398 aaPredicted RBP8.78□□□□□ -1
TMEM50B-208ENST00000474272 COL25A1Q9BXS0 654 aaPredicted RBP8.78□□□□□ -1
TMEM50B-208ENST00000474272 CDC14CA4D256 554 aa8.77□□□□□ -1.01
TMEM50B-208ENST00000474272 PCMTD1Q96MG8 357 aaPredicted RBP8.77□□□□□ -1.01
TMEM50B-208ENST00000474272 ADH1AP07327 375 aa8.76□□□□□ -1.01
TMEM50B-208ENST00000474272 NEUROD2Q15784 382 aa8.76□□□□□ -1.01
TMEM50B-208ENST00000474272 PNMA1Q8ND90 353 aa8.76□□□□□ -1.01
TMEM50B-208ENST00000474272 RNF217Q8TC41 542 aa8.76□□□□□ -1.01
TMEM50B-208ENST00000474272 CYLDQ9NQC7 956 aa8.76□□□□□ -1.01
TMEM50B-208ENST00000474272 ESPNB1AK53 854 aa8.75□□□□□ -1.01
TMEM50B-208ENST00000474272 ITGA6P23229 1130 aa8.75□□□□□ -1.01
TMEM50B-208ENST00000474272 SENP3-EIF4A1A0A087X0R7 540 aa8.74□□□□□ -1.01
TMEM50B-208ENST00000474272 GIGYF1O75420 1035 aaPredicted RBP8.74□□□□□ -1.01
TMEM50B-208ENST00000474272 PTGIRP43119 386 aa8.74□□□□□ -1.01
TMEM50B-208ENST00000474272 FOXD4L5Q5VV16 416 aaPredicted RBP8.74□□□□□ -1.01
TMEM50B-208ENST00000474272 NANOS1Q8WY41 292 aaKnown RBP8.74□□□□□ -1.01
TMEM50B-208ENST00000474272 PCDHB9Q9Y5E1 797 aa8.74□□□□□ -1.01
TMEM50B-208ENST00000474272 FBXO45P0C2W1 286 aa8.73□□□□□ -1.01
TMEM50B-208ENST00000474272 GJD4Q96KN9 370 aaPredicted RBP8.73□□□□□ -1.01
TMEM50B-208ENST00000474272 TMEM259Q4ZIN3 620 aa8.72□□□□□ -1.01
TMEM50B-208ENST00000474272 PRICKLE2Q7Z3G6 844 aa8.72□□□□□ -1.01
TMEM50B-208ENST00000474272 WHAMMQ8TF30 809 aa8.72□□□□□ -1.01
TMEM50B-208ENST00000474272 ZBBXA8MT70 800 aa8.71□□□□□ -1.02
TMEM50B-208ENST00000474272 RHOQP17081 205 aa8.71□□□□□ -1.02
TMEM50B-208ENST00000474272 GOPCQ9HD26 462 aa8.71□□□□□ -1.02
TMEM50B-208ENST00000474272 CUEDC1Q9NWM3 386 aaPredicted RBP8.71□□□□□ -1.02
TMEM50B-208ENST00000474272 SV2AQ7L0J3 742 aa8.7□□□□□ -1.02
TMEM50B-208ENST00000474272 GSK3AP49840 483 aa8.69□□□□□ -1.02
TMEM50B-208ENST00000474272 LYSMD3Q7Z3D4 306 aa8.69□□□□□ -1.02
TMEM50B-208ENST00000474272 ADAMTS8Q9UP79 889 aa8.69□□□□□ -1.02
TMEM50B-208ENST00000474272 MEN1O00255 615 aa8.68□□□□□ -1.02
TMEM50B-208ENST00000474272 ZNF385CQ66K41 422 aaPredicted RBP8.68□□□□□ -1.02
TMEM50B-208ENST00000474272 SEPT12Q8IYM1 358 aa8.67□□□□□ -1.02
TMEM50B-208ENST00000474272 SVOPQ8N4V2 548 aa8.67□□□□□ -1.02
TMEM50B-208ENST00000474272 ATP5J2-PTCD1G3V325 749 aa8.66□□□□□ -1.02
TMEM50B-208ENST00000474272 BRPF1P55201 1214 aaPredicted RBP8.66□□□□□ -1.02
TMEM50B-208ENST00000474272 KCTD17Q8N5Z5 321 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms