RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 FBLN1P23142 703 aa23.34■■□□□ 1.33
HSPG2-208ENST00000471322 RXRBP28702 533 aa23.34■■□□□ 1.33
HSPG2-208ENST00000471322 CCDC9Q9Y3X0 531 aaKnown RBP23.34■■□□□ 1.33
HSPG2-208ENST00000471322 KCNH5Q8NCM2 988 aa23.33■■□□□ 1.33
HSPG2-208ENST00000471322 COG3Q96JB2 828 aa23.33■■□□□ 1.33
HSPG2-208ENST00000471322 STRN4Q9NRL3 753 aa23.33■■□□□ 1.33
HSPG2-208ENST00000471322 MORC1Q86VD1 984 aa23.33■■□□□ 1.32
HSPG2-208ENST00000471322 COL14A1Q05707 1796 aaKnown RBP23.32■■□□□ 1.32
HSPG2-208ENST00000471322 OVOS2A0A0J9YW53 1432 aa23.32■■□□□ 1.32
HSPG2-208ENST00000471322 OVOS2Q6IE36 1432 aa23.32■■□□□ 1.32
HSPG2-208ENST00000471322 CPDO75976 1380 aa23.32■■□□□ 1.32
HSPG2-208ENST00000471322 ATRNO75882 1429 aa23.31■■□□□ 1.32
HSPG2-208ENST00000471322 RBM6P78332 1123 aaKnown RBP23.3■■□□□ 1.32
HSPG2-208ENST00000471322 ARHGEF25Q86VW2 580 aa23.3■■□□□ 1.32
HSPG2-208ENST00000471322 NFAT5O94916 1531 aa23.29■■□□□ 1.32
HSPG2-208ENST00000471322 AXIN2Q9Y2T1 843 aa23.29■■□□□ 1.32
HSPG2-208ENST00000471322 CAMTA1Q9Y6Y1 1673 aa23.28■■□□□ 1.32
HSPG2-208ENST00000471322 EVA1CP58658 441 aa23.28■■□□□ 1.32
HSPG2-208ENST00000471322 GJD4Q96KN9 370 aaPredicted RBP23.28■■□□□ 1.32
HSPG2-208ENST00000471322 NWD2Q9ULI1 1742 aa23.28■■□□□ 1.32
HSPG2-208ENST00000471322 EP400Q96L91 3159 aa23.28■■□□□ 1.32
HSPG2-208ENST00000471322 WDR43Q15061 677 aaKnown RBP eCLIP23.26■■□□□ 1.317e-6■□□□□ 9.7
HSPG2-208ENST00000471322 VPS72Q15906 364 aa23.26■■□□□ 1.31
HSPG2-208ENST00000471322 USP35Q9P2H5 1018 aa23.26■■□□□ 1.31
HSPG2-208ENST00000471322 NRAPQ86VF7 1730 aa23.26■■□□□ 1.31
HSPG2-208ENST00000471322 USP54Q70EL1 1684 aa23.25■■□□□ 1.31
HSPG2-208ENST00000471322 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.25■■□□□ 1.31
HSPG2-208ENST00000471322 KIF20BQ96Q89 1820 aa23.25■■□□□ 1.31
HSPG2-208ENST00000471322 AATKQ6ZMQ8 1374 aa23.25■■□□□ 1.31
HSPG2-208ENST00000471322 RRS1Q15050 365 aaKnown RBP23.24■■□□□ 1.31
HSPG2-208ENST00000471322 LARP1Q6PKG0 1096 aaKnown RBP23.24■■□□□ 1.31
HSPG2-208ENST00000471322 LMO7Q8WWI1 1683 aa23.23■■□□□ 1.31
HSPG2-208ENST00000471322 TNNT2P45379 298 aaPredicted RBP23.22■■□□□ 1.31
HSPG2-208ENST00000471322 GLI3P10071 1580 aa23.22■■□□□ 1.31
HSPG2-208ENST00000471322 RGS12O14924 1447 aa23.21■■□□□ 1.31
HSPG2-208ENST00000471322 BLMP54132 1417 aaPredicted RBP23.21■■□□□ 1.31
HSPG2-208ENST00000471322 MAP3K19Q56UN5 1328 aa23.21■■□□□ 1.31
HSPG2-208ENST00000471322 COL5A2P05997 1499 aaPredicted RBP23.2■■□□□ 1.3
HSPG2-208ENST00000471322 FAM98CQ17RN3 349 aaKnown RBP23.2■■□□□ 1.3
HSPG2-208ENST00000471322 ADAMTS8Q9UP79 889 aa23.2■■□□□ 1.3
HSPG2-208ENST00000471322 LTN1O94822 1766 aa23.2■■□□□ 1.3
HSPG2-208ENST00000471322 COL18A1P39060 1754 aa23.2■■□□□ 1.3
HSPG2-208ENST00000471322 SPATA31A5Q5VU36 1347 aa23.19■■□□□ 1.3
HSPG2-208ENST00000471322 SPATA31A7Q8IWB4 1347 aa23.19■■□□□ 1.3
HSPG2-208ENST00000471322 A0A0G2JS52 829 aa23.19■■□□□ 1.3
HSPG2-208ENST00000471322 MYT1Q01538 1121 aa23.19■■□□□ 1.3
HSPG2-208ENST00000471322 RGPD5Q99666 1765 aa23.19■■□□□ 1.3
HSPG2-208ENST00000471322 CSB-PGBD3P0DP91 1061 aa23.18■■□□□ 1.3
HSPG2-208ENST00000471322 SPATA31A1Q5TZJ5 1347 aa23.17■■□□□ 1.3
HSPG2-208ENST00000471322 NEFLP07196 543 aa23.17■■□□□ 1.3
HSPG2-208ENST00000471322 AMPHP49418 695 aa23.17■■□□□ 1.3
HSPG2-208ENST00000471322 CFAP53Q96M91 514 aa23.17■■□□□ 1.3
HSPG2-208ENST00000471322 PDE3BQ13370 1112 aa23.16■■□□□ 1.3
HSPG2-208ENST00000471322 TOM1L2Q6ZVM7 507 aa23.16■■□□□ 1.3
HSPG2-208ENST00000471322 LTV1Q96GA3 475 aaPredicted RBP23.16■■□□□ 1.3
HSPG2-208ENST00000471322 PPM1GO15355 546 aaPredicted RBP23.15■■□□□ 1.3
HSPG2-208ENST00000471322 SMG6Q86US8 1419 aaKnown RBP23.15■■□□□ 1.3
HSPG2-208ENST00000471322 EMILIN1Q9Y6C2 1016 aa23.15■■□□□ 1.3
HSPG2-208ENST00000471322 SEPT12Q8IYM1 358 aa23.14■■□□□ 1.29
HSPG2-208ENST00000471322 IP6K1Q92551 441 aa23.14■■□□□ 1.29
HSPG2-208ENST00000471322 CDK12Q9NYV4 1490 aaPredicted RBP23.13■■□□□ 1.29
HSPG2-208ENST00000471322 HOXC9P31274 260 aa23.13■■□□□ 1.29
HSPG2-208ENST00000471322 MTHFSP49914 203 aa23.13■■□□□ 1.29
HSPG2-208ENST00000471322 ANKRD24Q8TF21 1146 aa23.13■■□□□ 1.29
HSPG2-208ENST00000471322 WDR17Q8IZU2 1322 aa23.13■■□□□ 1.29
HSPG2-208ENST00000471322 NUDCQ9Y266 331 aa23.12■■□□□ 1.29
HSPG2-208ENST00000471322 ERBB3P21860 1342 aa23.11■■□□□ 1.29
HSPG2-208ENST00000471322 CRB1P82279 1406 aa23.11■■□□□ 1.29
HSPG2-208ENST00000471322 TCP11L2Q8N4U5 519 aa23.11■■□□□ 1.29
HSPG2-208ENST00000471322 HSP90AB2PQ58FF8 381 aa23.1■■□□□ 1.29
HSPG2-208ENST00000471322 NGEFQ8N5V2 710 aa23.1■■□□□ 1.29
HSPG2-208ENST00000471322 NLRP2Q9NX02 1062 aa23.1■■□□□ 1.29
HSPG2-208ENST00000471322 SOCS7O14512 581 aa23.08■■□□□ 1.29
HSPG2-208ENST00000471322 ONECUT3O60422 494 aaPredicted RBP23.08■■□□□ 1.29
HSPG2-208ENST00000471322 POLKQ9UBT6 870 aa23.08■■□□□ 1.29
HSPG2-208ENST00000471322 ANKRD26Q9UPS8 1709 aa23.08■■□□□ 1.28
HSPG2-208ENST00000471322 SUPT16HQ9Y5B9 1047 aaKnown RBP23.08■■□□□ 1.28
HSPG2-208ENST00000471322 ABCC6O95255 1503 aa23.07■■□□□ 1.28
HSPG2-208ENST00000471322 PEAK1Q9H792 1746 aa23.07■■□□□ 1.28
HSPG2-208ENST00000471322 FAM182BQ5T319 152 aa23.05■■□□□ 1.28
HSPG2-208ENST00000471322 CARD10Q9BWT7 1032 aa23.05■■□□□ 1.28
HSPG2-208ENST00000471322 MAP2P11137 1827 aaKnown RBP23.04■■□□□ 1.28
HSPG2-208ENST00000471322 RTL1A6NKG5 1358 aa23.04■■□□□ 1.28
HSPG2-208ENST00000471322 FLT4P35916 1363 aa23.04■■□□□ 1.28
HSPG2-208ENST00000471322 FKBP8Q14318 412 aa23.04■■□□□ 1.28
HSPG2-208ENST00000471322 BARGINQ6ZT62 677 aa23.04■■□□□ 1.28
HSPG2-208ENST00000471322 BRWD3Q6RI45 1802 aa23.03■■□□□ 1.28
HSPG2-208ENST00000471322 THRAP3Q9Y2W1 955 aaKnown RBP23.03■■□□□ 1.28
HSPG2-208ENST00000471322 KRT27Q7Z3Y8 459 aa23.02■■□□□ 1.28
HSPG2-208ENST00000471322 SALL2Q9Y467 1007 aaPredicted RBP23.02■■□□□ 1.28
HSPG2-208ENST00000471322 USHBP1Q8N6Y0 703 aa23.01■■□□□ 1.27
HSPG2-208ENST00000471322 THSD7AQ9UPZ6 1657 aa23■■□□□ 1.27
HSPG2-208ENST00000471322 SENP3-EIF4A1A0A087X0R7 540 aa23■■□□□ 1.27
HSPG2-208ENST00000471322 NBPF6Q5VWK0 638 aa22.99■■□□□ 1.27
HSPG2-208ENST00000471322 NBPF4Q96M43 638 aa22.99■■□□□ 1.27
HSPG2-208ENST00000471322 ERICH6BQ5W0A0 696 aa22.98■■□□□ 1.27
HSPG2-208ENST00000471322 RGPD2P0DJD1 1756 aa22.98■■□□□ 1.27
HSPG2-208ENST00000471322 KIF24Q5T7B8 1368 aa22.98■■□□□ 1.27
HSPG2-208ENST00000471322 RUNDC1Q96C34 613 aa22.97■■□□□ 1.27
HSPG2-208ENST00000471322 CCDC146Q8IYE0 955 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms