RNA–Protein interactions for RNA: ENST00000471134.1

TRA2B-210, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-210ENST00000471134 CCDC116Q8IYX3 515 aa12.06□□□□□ -0.48
TRA2B-210ENST00000471134 IRF7Q92985 503 aa12.06□□□□□ -0.48
TRA2B-210ENST00000471134 ARHGAP9Q9BRR9 750 aa12.06□□□□□ -0.48
TRA2B-210ENST00000471134 HMX1Q9NP08 348 aaPredicted RBP12.06□□□□□ -0.48
TRA2B-210ENST00000471134 BMP2P12643 396 aa12.04□□□□□ -0.48
TRA2B-210ENST00000471134 LORP23490 312 aaPredicted RBP12.04□□□□□ -0.48
TRA2B-210ENST00000471134 ATP1B4Q9UN42 357 aaPredicted RBP12.04□□□□□ -0.48
TRA2B-210ENST00000471134 EMILIN1Q9Y6C2 1016 aa12.03□□□□□ -0.48
TRA2B-210ENST00000471134 PPP1R26Q5T8A7 1209 aaPredicted RBP12.02□□□□□ -0.49
TRA2B-210ENST00000471134 SOS2Q07890 1332 aaPredicted RBP12.02□□□□□ -0.49
TRA2B-210ENST00000471134 ZC3H4Q9UPT8 1303 aaKnown RBP12.02□□□□□ -0.49
TRA2B-210ENST00000471134 MAN1A2O60476 641 aa12.01□□□□□ -0.49
TRA2B-210ENST00000471134 USP17L8P0C7I0 530 aa12.01□□□□□ -0.49
TRA2B-210ENST00000471134 CBLBQ13191 982 aa12.01□□□□□ -0.49
TRA2B-210ENST00000471134 SLC10A4Q96EP9 437 aa12.01□□□□□ -0.49
TRA2B-210ENST00000471134 DNMT3LQ9UJW3 386 aa12.01□□□□□ -0.49
TRA2B-210ENST00000471134 SLC24A1O60721 1099 aa12□□□□□ -0.49
TRA2B-210ENST00000471134 UPP2O95045 317 aa12□□□□□ -0.49
TRA2B-210ENST00000471134 KCTD15Q96SI1 283 aaPredicted RBP12□□□□□ -0.49
TRA2B-210ENST00000471134 RFC5P40937 340 aa11.99□□□□□ -0.49
TRA2B-210ENST00000471134 ZBTB33Q86T24 672 aa11.98□□□□□ -0.49
TRA2B-210ENST00000471134 ADAM32Q8TC27 787 aa11.98□□□□□ -0.49
TRA2B-210ENST00000471134 VSIG8P0DPA2 414 aa11.97□□□□□ -0.49
TRA2B-210ENST00000471134 INTS6LQ5JSJ4 861 aaKnown RBP11.97□□□□□ -0.49
TRA2B-210ENST00000471134 Q6ZVU0 165 aa11.97□□□□□ -0.49
TRA2B-210ENST00000471134 TSEN34Q9BSV6 310 aaKnown RBP11.97□□□□□ -0.49
TRA2B-210ENST00000471134 PTK2Q05397 1052 aa11.96□□□□□ -0.49
TRA2B-210ENST00000471134 PGPEP1Q9NXJ5 209 aa11.95□□□□□ -0.5
TRA2B-210ENST00000471134 GPSM3Q9Y4H4 160 aa11.95□□□□□ -0.5
TRA2B-210ENST00000471134 PPFIA3O75145 1194 aa11.94□□□□□ -0.5
TRA2B-210ENST00000471134 CDV3Q9UKY7 258 aaKnown RBP11.94□□□□□ -0.5
TRA2B-210ENST00000471134 ZSCAN1Q8NBB4 408 aa11.93□□□□□ -0.5
TRA2B-210ENST00000471134 TRIM34Q9BYJ4 488 aa11.93□□□□□ -0.5
TRA2B-210ENST00000471134 TTLL8A6PVC2 850 aa11.91□□□□□ -0.5
TRA2B-210ENST00000471134 SPINT1O43278 529 aa11.91□□□□□ -0.5
TRA2B-210ENST00000471134 AGBL1Q96MI9 1066 aa11.91□□□□□ -0.5
TRA2B-210ENST00000471134 GOPCQ9HD26 462 aa11.91□□□□□ -0.5
TRA2B-210ENST00000471134 DHX9Q08211 1270 aaKnown RBP11.9□□□□□ -0.5
TRA2B-210ENST00000471134 TMPRSS4Q9NRS4 437 aa11.9□□□□□ -0.5
TRA2B-210ENST00000471134 FIGNL2A6NMB9 653 aa11.89□□□□□ -0.51
TRA2B-210ENST00000471134 NEUROD2Q15784 382 aa11.89□□□□□ -0.51
TRA2B-210ENST00000471134 IL27Q8NEV9 243 aa11.88□□□□□ -0.51
TRA2B-210ENST00000471134 PCMTD1Q96MG8 357 aaPredicted RBP11.88□□□□□ -0.51
TRA2B-210ENST00000471134 RAB15P59190 212 aa11.87□□□□□ -0.51
TRA2B-210ENST00000471134 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.87□□□□□ -0.51
TRA2B-210ENST00000471134 ZNF784Q8NCA9 323 aaPredicted RBP11.87□□□□□ -0.51
TRA2B-210ENST00000471134 CTSOP43234 321 aaPredicted RBP11.86□□□□□ -0.51
TRA2B-210ENST00000471134 RELBQ01201 579 aa11.86□□□□□ -0.51
TRA2B-210ENST00000471134 PTSQ03393 145 aa11.86□□□□□ -0.51
TRA2B-210ENST00000471134 NBPF20Q3BBV1 942 aa11.86□□□□□ -0.51
TRA2B-210ENST00000471134 DZIP3Q86Y13 1208 aaKnown RBP11.85□□□□□ -0.51
TRA2B-210ENST00000471134 PNMA1Q8ND90 353 aa11.85□□□□□ -0.51
TRA2B-210ENST00000471134 GJD4Q96KN9 370 aaPredicted RBP11.85□□□□□ -0.51
TRA2B-210ENST00000471134 ESPNB1AK53 854 aa11.84□□□□□ -0.51
TRA2B-210ENST00000471134 ERVH48-1M5A8F1 160 aa11.84□□□□□ -0.51
TRA2B-210ENST00000471134 LILRA1O75019 489 aa11.84□□□□□ -0.51
TRA2B-210ENST00000471134 INSM2Q96T92 566 aaPredicted RBP11.84□□□□□ -0.51
TRA2B-210ENST00000471134 ADD1P35611 737 aaKnown RBP11.83□□□□□ -0.52
TRA2B-210ENST00000471134 BRPF1P55201 1214 aaPredicted RBP11.83□□□□□ -0.52
TRA2B-210ENST00000471134 TMEM259Q4ZIN3 620 aa11.83□□□□□ -0.52
TRA2B-210ENST00000471134 GPR161Q8N6U8 529 aaKnown RBP11.83□□□□□ -0.52
TRA2B-210ENST00000471134 KDF1Q8NAX2 398 aaPredicted RBP11.83□□□□□ -0.52
TRA2B-210ENST00000471134 ZNF395Q9H8N7 513 aaPredicted RBP11.83□□□□□ -0.52
TRA2B-210ENST00000471134 KRT76Q01546 638 aa11.81□□□□□ -0.52
TRA2B-210ENST00000471134 FAM181BA6NEQ2 426 aa11.8□□□□□ -0.52
TRA2B-210ENST00000471134 ADH1AP07327 375 aa11.8□□□□□ -0.52
TRA2B-210ENST00000471134 CCDC155Q8N6L0 562 aa11.8□□□□□ -0.52
TRA2B-210ENST00000471134 RNF217Q8TC41 542 aa11.8□□□□□ -0.52
TRA2B-210ENST00000471134 SLC35F4A4IF30 521 aa11.79□□□□□ -0.52
TRA2B-210ENST00000471134 FBXO45P0C2W1 286 aa11.79□□□□□ -0.52
TRA2B-210ENST00000471134 POLMQ9NP87 494 aaPredicted RBP11.79□□□□□ -0.52
TRA2B-210ENST00000471134 FOXD4L5Q5VV16 416 aaPredicted RBP11.78□□□□□ -0.52
TRA2B-210ENST00000471134 ZBBXA8MT70 800 aa11.77□□□□□ -0.53
TRA2B-210ENST00000471134 GPR37L1O60883 481 aa11.77□□□□□ -0.53
TRA2B-210ENST00000471134 CYLDQ9NQC7 956 aa11.76□□□□□ -0.53
TRA2B-210ENST00000471134 SENP3-EIF4A1A0A087X0R7 540 aa11.75□□□□□ -0.53
TRA2B-210ENST00000471134 GIGYF1O75420 1035 aaPredicted RBP11.75□□□□□ -0.53
TRA2B-210ENST00000471134 PTGIRP43119 386 aa11.75□□□□□ -0.53
TRA2B-210ENST00000471134 NANOS1Q8WY41 292 aaKnown RBP11.75□□□□□ -0.53
TRA2B-210ENST00000471134 PCDHB9Q9Y5E1 797 aa11.75□□□□□ -0.53
TRA2B-210ENST00000471134 SEPT12Q8IYM1 358 aa11.74□□□□□ -0.53
TRA2B-210ENST00000471134 ITGA6P23229 1130 aa11.73□□□□□ -0.53
TRA2B-210ENST00000471134 CNTNAP3BQ96NU0 1288 aa11.73□□□□□ -0.53
TRA2B-210ENST00000471134 CNTNAP3Q9BZ76 1288 aa11.73□□□□□ -0.53
TRA2B-210ENST00000471134 RNFT1Q5M7Z0 435 aa11.72□□□□□ -0.53
TRA2B-210ENST00000471134 MTMR14Q8NCE2 650 aa11.72□□□□□ -0.53
TRA2B-210ENST00000471134 COL25A1Q9BXS0 654 aaPredicted RBP11.72□□□□□ -0.53
TRA2B-210ENST00000471134 VWA5B2Q8N398 1253 aa11.69□□□□□ -0.54
TRA2B-210ENST00000471134 SNRKQ9NRH2 765 aa11.68□□□□□ -0.54
TRA2B-210ENST00000471134 CDC14CA4D256 554 aa11.67□□□□□ -0.54
TRA2B-210ENST00000471134 NR1H3Q13133 447 aa11.67□□□□□ -0.54
TRA2B-210ENST00000471134 BANK1Q8NDB2 785 aa11.67□□□□□ -0.54
TRA2B-210ENST00000471134 LYSMD3Q7Z3D4 306 aa11.66□□□□□ -0.54
TRA2B-210ENST00000471134 CUEDC1Q9NWM3 386 aaPredicted RBP11.66□□□□□ -0.54
TRA2B-210ENST00000471134 ATP5J2-PTCD1G3V325 749 aa11.65□□□□□ -0.54
TRA2B-210ENST00000471134 ERVK-9P63128 1117 aa11.65□□□□□ -0.54
TRA2B-210ENST00000471134 SOCS7O14512 581 aa11.64□□□□□ -0.55
TRA2B-210ENST00000471134 SCTRP47872 440 aa11.64□□□□□ -0.55
TRA2B-210ENST00000471134 RNF144AP50876 292 aaPredicted RBP11.64□□□□□ -0.55
TRA2B-210ENST00000471134 SV2AQ7L0J3 742 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms