RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 IL13P35225 146 aa15.14■□□□□ 0.01
SREBF1-209ENST00000470247 SPATA31A6Q5VVP1 1343 aa15.14■□□□□ 0.01
SREBF1-209ENST00000470247 NUTM2BA6NNL0 878 aaPredicted RBP15.13■□□□□ 0.01
SREBF1-209ENST00000470247 NUTM2EB1AL46 878 aaPredicted RBP15.13■□□□□ 0.01
SREBF1-209ENST00000470247 HAP1P54257 671 aaPredicted RBP15.13■□□□□ 0.01
SREBF1-209ENST00000470247 EIF4A2Q14240 407 aaKnown RBP15.13■□□□□ 0.01
SREBF1-209ENST00000470247 NUTM2AQ8IVF1 878 aaPredicted RBP15.13■□□□□ 0.01
SREBF1-209ENST00000470247 PRDM11Q9NQV5 511 aa15.13■□□□□ 0.01
SREBF1-209ENST00000470247 LTN1O94822 1766 aa15.12■□□□□ 0.01
SREBF1-209ENST00000470247 ZBTB7CA1YPR0 619 aa15.12■□□□□ 0.01
SREBF1-209ENST00000470247 CFAP53Q96M91 514 aa15.12■□□□□ 0.01
SREBF1-209ENST00000470247 LRP6O75581 1613 aa15.11■□□□□ 0.01
SREBF1-209ENST00000470247 DIAPH1O60610 1272 aaKnown RBP15.11■□□□□ 0.01
SREBF1-209ENST00000470247 ADAMTS2O95450 1211 aa15.11■□□□□ 0.01
SREBF1-209ENST00000470247 CAMTA1Q9Y6Y1 1673 aa15.1■□□□□ 0.01
SREBF1-209ENST00000470247 LMO7Q8WWI1 1683 aa15.09■□□□□ 0.01
SREBF1-209ENST00000470247 BLMP54132 1417 aaPredicted RBP15.09■□□□□ 0.01
SREBF1-209ENST00000470247 ABCC6O95255 1503 aa15.09■□□□□ 0.01
SREBF1-209ENST00000470247 LTV1Q96GA3 475 aaPredicted RBP15.08■□□□□ 0
SREBF1-209ENST00000470247 EYA1Q99502 592 aa15.08■□□□□ 0
SREBF1-209ENST00000470247 ADAMTS8Q9UP79 889 aa15.08■□□□□ 0
SREBF1-209ENST00000470247 ERBB3P21860 1342 aa15.08■□□□□ 0
SREBF1-209ENST00000470247 ANKRD24Q8TF21 1146 aa15.07■□□□□ 0
SREBF1-209ENST00000470247 NBPF6Q5VWK0 638 aa15.06■□□□□ 0
SREBF1-209ENST00000470247 NBPF4Q96M43 638 aa15.06■□□□□ 0
SREBF1-209ENST00000470247 BTG4Q9NY30 223 aa15.06■□□□□ 0
SREBF1-209ENST00000470247 NUDCQ9Y266 331 aa15.06■□□□□ 0
SREBF1-209ENST00000470247 SLIT2O94813 1529 aa15.06■□□□□ 0
SREBF1-209ENST00000470247 RGPD5Q99666 1765 aa15.06■□□□□ 0
SREBF1-209ENST00000470247 FAM9BQ8IZU0 186 aa15.05■□□□□ -0
SREBF1-209ENST00000470247 FNBP4Q8N3X1 1017 aaPredicted RBP15.05■□□□□ -0
SREBF1-209ENST00000470247 IGSF1Q8N6C5 1336 aa15.05■□□□□ -0
SREBF1-209ENST00000470247 COL5A2P05997 1499 aaPredicted RBP15.05■□□□□ -0
SREBF1-209ENST00000470247 COL14A1Q05707 1796 aaKnown RBP15.05■□□□□ -0
SREBF1-209ENST00000470247 U2SURPO15042 1029 aaKnown RBP15.04■□□□□ -0
SREBF1-209ENST00000470247 U2AF1L5P0DN76 240 aaPredicted RBP15.04■□□□□ -0
SREBF1-209ENST00000470247 U2AF1Q01081 240 aaKnown RBP eCLIP15.04■□□□□ -0
SREBF1-209ENST00000470247 RGPD1P0DJD0 1748 aa15.03■□□□□ -0
SREBF1-209ENST00000470247 NCAPD2Q15021 1401 aa15.03■□□□□ -0
SREBF1-209ENST00000470247 WDR17Q8IZU2 1322 aa15.03■□□□□ -0
SREBF1-209ENST00000470247 WDR43Q15061 677 aaKnown RBP eCLIP15.03■□□□□ -0
SREBF1-209ENST00000470247 LARP1Q6PKG0 1096 aaKnown RBP15.03■□□□□ -0
SREBF1-209ENST00000470247 AEBP1Q8IUX7 1158 aa15.03■□□□□ -0
SREBF1-209ENST00000470247 C8orf37Q96NL8 207 aa15.03■□□□□ -0
SREBF1-209ENST00000470247 RSPH6AQ9H0K4 717 aa15.03■□□□□ -0
SREBF1-209ENST00000470247 BCL9LQ86UU0 1499 aa15.02■□□□□ -0
SREBF1-209ENST00000470247 KDRP35968 1356 aa15.02■□□□□ -0
SREBF1-209ENST00000470247 NGLY1Q96IV0 654 aa15.02■□□□□ -0
SREBF1-209ENST00000470247 PLEKHF1Q96S99 279 aa15.02■□□□□ -0
SREBF1-209ENST00000470247 FCHSD2O94868 740 aa15.01□□□□□ -0.01
SREBF1-209ENST00000470247 HMOX1P09601 288 aa15.01□□□□□ -0.01
SREBF1-209ENST00000470247 EVA1CP58658 441 aa15.01□□□□□ -0.01
SREBF1-209ENST00000470247 SULT6B1Q6IMI4 303 aa15.01□□□□□ -0.01
SREBF1-209ENST00000470247 USHBP1Q8N6Y0 703 aa15.01□□□□□ -0.01
SREBF1-209ENST00000470247 CSB-PGBD3P0DP91 1061 aa15□□□□□ -0.01
SREBF1-209ENST00000470247 ILDR1Q86SU0 546 aaPredicted RBP15□□□□□ -0.01
SREBF1-209ENST00000470247 UNC5CLQ8IV45 518 aa15□□□□□ -0.01
SREBF1-209ENST00000470247 STRN4Q9NRL3 753 aa15□□□□□ -0.01
SREBF1-209ENST00000470247 NLRP2Q9NX02 1062 aa15□□□□□ -0.01
SREBF1-209ENST00000470247 RGPD2P0DJD1 1756 aa15□□□□□ -0.01
SREBF1-209ENST00000470247 CARD10Q9BWT7 1032 aa14.99□□□□□ -0.01
SREBF1-209ENST00000470247 NRAPQ86VF7 1730 aa14.98□□□□□ -0.01
SREBF1-209ENST00000470247 PLCH1Q4KWH8 1693 aa14.98□□□□□ -0.01
SREBF1-209ENST00000470247 MEX3CQ5U5Q3 659 aaKnown RBP14.98□□□□□ -0.01
SREBF1-209ENST00000470247 TOM1L2Q6ZVM7 507 aa14.98□□□□□ -0.01
SREBF1-209ENST00000470247 CCDC146Q8IYE0 955 aa14.98□□□□□ -0.01
SREBF1-209ENST00000470247 AFF2P51816 1311 aa14.97□□□□□ -0.01
SREBF1-209ENST00000470247 PRKAR2BP31323 418 aa14.97□□□□□ -0.01
SREBF1-209ENST00000470247 PHACTR3Q96KR7 559 aa14.97□□□□□ -0.01
SREBF1-209ENST00000470247 USP21Q9UK80 565 aa14.97□□□□□ -0.01
SREBF1-209ENST00000470247 CRB1P82279 1406 aa14.97□□□□□ -0.01
SREBF1-209ENST00000470247 NWD2Q9ULI1 1742 aa14.97□□□□□ -0.01
SREBF1-209ENST00000470247 FAM208AQ9UK61 1670 aaKnown RBP14.97□□□□□ -0.01
SREBF1-209ENST00000470247 RUNDC1Q96C34 613 aa14.96□□□□□ -0.01
SREBF1-209ENST00000470247 SPATA31A1Q5TZJ5 1347 aa14.95□□□□□ -0.02
SREBF1-209ENST00000470247 SPATA31A5Q5VU36 1347 aa14.95□□□□□ -0.02
SREBF1-209ENST00000470247 SPATA31A7Q8IWB4 1347 aa14.95□□□□□ -0.02
SREBF1-209ENST00000470247 VPS72Q15906 364 aa14.95□□□□□ -0.02
SREBF1-209ENST00000470247 APAF1O14727 1248 aa14.94□□□□□ -0.02
SREBF1-209ENST00000470247 TCP11L2Q8N4U5 519 aa14.93□□□□□ -0.02
SREBF1-209ENST00000470247 PNNQ9H307 717 aaKnown RBP14.93□□□□□ -0.02
SREBF1-209ENST00000470247 ATRNO75882 1429 aa14.92□□□□□ -0.02
SREBF1-209ENST00000470247 MEGF6O75095 1541 aa14.92□□□□□ -0.02
SREBF1-209ENST00000470247 SENP3-EIF4A1A0A087X0R7 540 aa14.92□□□□□ -0.02
SREBF1-209ENST00000470247 USP35Q9P2H5 1018 aa14.92□□□□□ -0.02
SREBF1-209ENST00000470247 RGS17Q9UGC6 210 aaPredicted RBP14.92□□□□□ -0.02
SREBF1-209ENST00000470247 DISP2A7MBM2 1401 aa14.92□□□□□ -0.02
SREBF1-209ENST00000470247 TMPOP42166 694 aaKnown RBP14.91□□□□□ -0.02
SREBF1-209ENST00000470247 MTHFSDQ2M296 383 aaKnown RBP14.91□□□□□ -0.02
SREBF1-209ENST00000470247 THRAP3Q9Y2W1 955 aaKnown RBP14.91□□□□□ -0.02
SREBF1-209ENST00000470247 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.91□□□□□ -0.02
SREBF1-209ENST00000470247 IL2RBP14784 551 aa14.9□□□□□ -0.02
SREBF1-209ENST00000470247 BARGINQ6ZT62 677 aa14.9□□□□□ -0.02
SREBF1-209ENST00000470247 RAPGEF4Q8WZA2 1011 aa14.9□□□□□ -0.02
SREBF1-209ENST00000470247 QTRT2Q9H974 415 aaKnown RBP14.9□□□□□ -0.02
SREBF1-209ENST00000470247 TATP17735 454 aaPredicted RBP14.89□□□□□ -0.03
SREBF1-209ENST00000470247 NFE2L2Q16236 605 aa14.89□□□□□ -0.03
SREBF1-209ENST00000470247 GJD4Q96KN9 370 aaPredicted RBP14.89□□□□□ -0.03
SREBF1-209ENST00000470247 PHF23Q9BUL5 403 aaPredicted RBP14.89□□□□□ -0.03
SREBF1-209ENST00000470247 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms