RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 FAM98CQ17RN3 349 aaKnown RBP13.49□□□□□ -0.25
SRRT-208ENST00000469602 LARP1Q6PKG0 1096 aaKnown RBP13.49□□□□□ -0.25
SRRT-208ENST00000469602 COG3Q96JB2 828 aa13.49□□□□□ -0.25
SRRT-208ENST00000469602 CARD14Q9BXL6 1004 aa13.49□□□□□ -0.25
SRRT-208ENST00000469602 THSD7AQ9UPZ6 1657 aa13.49□□□□□ -0.25
SRRT-208ENST00000469602 NSD3Q9BZ95 1437 aa13.48□□□□□ -0.25
SRRT-208ENST00000469602 C11orf95C9JLR9 678 aaPredicted RBP13.48□□□□□ -0.25
SRRT-208ENST00000469602 FYB1O15117 783 aa13.48□□□□□ -0.25
SRRT-208ENST00000469602 AXIN2Q9Y2T1 843 aa13.48□□□□□ -0.25
SRRT-208ENST00000469602 CRB1P82279 1406 aa13.47□□□□□ -0.25
SRRT-208ENST00000469602 A0A0G2JS52 829 aa13.46□□□□□ -0.25
SRRT-208ENST00000469602 MYT1Q01538 1121 aa13.46□□□□□ -0.25
SRRT-208ENST00000469602 UPF1Q92900 1129 aaKnown RBP eCLIP13.46□□□□□ -0.25
SRRT-208ENST00000469602 GGNBP2Q9H3C7 697 aa13.46□□□□□ -0.25
SRRT-208ENST00000469602 USP35Q9P2H5 1018 aa13.46□□□□□ -0.25
SRRT-208ENST00000469602 WDR17Q8IZU2 1322 aa13.45□□□□□ -0.26
SRRT-208ENST00000469602 BARGINQ6ZT62 677 aa13.45□□□□□ -0.26
SRRT-208ENST00000469602 TCP11L2Q8N4U5 519 aa13.45□□□□□ -0.26
SRRT-208ENST00000469602 WNK3Q9BYP7 1800 aa13.45□□□□□ -0.26
SRRT-208ENST00000469602 KRT27Q7Z3Y8 459 aa13.44□□□□□ -0.26
SRRT-208ENST00000469602 THRAP3Q9Y2W1 955 aaKnown RBP13.44□□□□□ -0.26
SRRT-208ENST00000469602 ANKRD26Q9UPS8 1709 aa13.44□□□□□ -0.26
SRRT-208ENST00000469602 CGNL1Q0VF96 1302 aa13.43□□□□□ -0.26
SRRT-208ENST00000469602 KIF7Q2M1P5 1343 aa13.43□□□□□ -0.26
SRRT-208ENST00000469602 BLMP54132 1417 aaPredicted RBP13.43□□□□□ -0.26
SRRT-208ENST00000469602 TOM1L2Q6ZVM7 507 aa13.43□□□□□ -0.26
SRRT-208ENST00000469602 PARP4Q9UKK3 1724 aaKnown RBP13.43□□□□□ -0.26
SRRT-208ENST00000469602 CSB-PGBD3P0DP91 1061 aa13.42□□□□□ -0.26
SRRT-208ENST00000469602 PANK3Q9H999 370 aa13.42□□□□□ -0.26
SRRT-208ENST00000469602 ERBB3P21860 1342 aa13.41□□□□□ -0.26
SRRT-208ENST00000469602 MAP3K19Q56UN5 1328 aa13.41□□□□□ -0.26
SRRT-208ENST00000469602 FAM208AQ9UK61 1670 aaKnown RBP13.41□□□□□ -0.26
SRRT-208ENST00000469602 FBLN1P23142 703 aa13.41□□□□□ -0.26
SRRT-208ENST00000469602 IP6K1Q92551 441 aa13.41□□□□□ -0.26
SRRT-208ENST00000469602 CARD10Q9BWT7 1032 aa13.41□□□□□ -0.26
SRRT-208ENST00000469602 MAP2P11137 1827 aaKnown RBP13.4□□□□□ -0.26
SRRT-208ENST00000469602 RTL1A6NKG5 1358 aa13.4□□□□□ -0.26
SRRT-208ENST00000469602 LRRC37A3O60309 1634 aa13.39□□□□□ -0.27
SRRT-208ENST00000469602 HOXC9P31274 260 aa13.39□□□□□ -0.27
SRRT-208ENST00000469602 AMPHP49418 695 aa13.39□□□□□ -0.27
SRRT-208ENST00000469602 RRS1Q15050 365 aaKnown RBP13.39□□□□□ -0.27
SRRT-208ENST00000469602 ANKRD24Q8TF21 1146 aa13.39□□□□□ -0.27
SRRT-208ENST00000469602 PEAK1Q9H792 1746 aa13.39□□□□□ -0.27
SRRT-208ENST00000469602 CCDC7Q96M83 1385 aa13.38□□□□□ -0.27
SRRT-208ENST00000469602 CCDC125Q86Z20 511 aa13.38□□□□□ -0.27
SRRT-208ENST00000469602 RGPD2P0DJD1 1756 aa13.37□□□□□ -0.27
SRRT-208ENST00000469602 NSD2O96028 1365 aa13.37□□□□□ -0.27
SRRT-208ENST00000469602 KIF24Q5T7B8 1368 aa13.37□□□□□ -0.27
SRRT-208ENST00000469602 PDE3BQ13370 1112 aa13.37□□□□□ -0.27
SRRT-208ENST00000469602 FAM182BQ5T319 152 aa13.37□□□□□ -0.27
SRRT-208ENST00000469602 CDCA7Q9BWT1 371 aaPredicted RBP13.37□□□□□ -0.27
SRRT-208ENST00000469602 NLRP2Q9NX02 1062 aa13.37□□□□□ -0.27
SRRT-208ENST00000469602 DISP2A7MBM2 1401 aa13.37□□□□□ -0.27
SRRT-208ENST00000469602 WASHC2AQ641Q2 1341 aa13.37□□□□□ -0.27
SRRT-208ENST00000469602 RGPD1P0DJD0 1748 aa13.36□□□□□ -0.27
SRRT-208ENST00000469602 FLT4P35916 1363 aa13.35□□□□□ -0.27
SRRT-208ENST00000469602 LTV1Q96GA3 475 aaPredicted RBP13.35□□□□□ -0.27
SRRT-208ENST00000469602 KNSTRNQ9Y448 316 aa13.35□□□□□ -0.27
SRRT-208ENST00000469602 INSRP06213 1382 aa13.34□□□□□ -0.27
SRRT-208ENST00000469602 DDB1Q16531 1140 aa13.34□□□□□ -0.27
SRRT-208ENST00000469602 FAM196AQ6ZSG2 479 aa13.34□□□□□ -0.27
SRRT-208ENST00000469602 TNS1Q9HBL0 1735 aaKnown RBP13.33□□□□□ -0.27
SRRT-208ENST00000469602 SMG6Q86US8 1419 aaKnown RBP13.33□□□□□ -0.28
SRRT-208ENST00000469602 HSP90AB2PQ58FF8 381 aa13.33□□□□□ -0.28
SRRT-208ENST00000469602 EMILIN1Q9Y6C2 1016 aa13.33□□□□□ -0.28
SRRT-208ENST00000469602 SBF2Q86WG5 1849 aa13.32□□□□□ -0.28
SRRT-208ENST00000469602 IL2RBP14784 551 aa13.32□□□□□ -0.28
SRRT-208ENST00000469602 TNNT2P45379 298 aaPredicted RBP13.32□□□□□ -0.28
SRRT-208ENST00000469602 SF3B2Q13435 895 aaKnown RBP13.32□□□□□ -0.28
SRRT-208ENST00000469602 AMER1Q5JTC6 1135 aaPredicted RBP13.32□□□□□ -0.28
SRRT-208ENST00000469602 POLKQ9UBT6 870 aa13.32□□□□□ -0.28
SRRT-208ENST00000469602 OVOS2A0A0G2JMS6 1433 aa13.31□□□□□ -0.28
SRRT-208ENST00000469602 TNS2Q63HR2 1409 aa13.31□□□□□ -0.28
SRRT-208ENST00000469602 PPM1GO15355 546 aaPredicted RBP13.31□□□□□ -0.28
SRRT-208ENST00000469602 PER1O15534 1290 aaPredicted RBP13.31□□□□□ -0.28
SRRT-208ENST00000469602 MORC1Q86VD1 984 aa13.31□□□□□ -0.28
SRRT-208ENST00000469602 EXOC5O00471 708 aa13.3□□□□□ -0.28
SRRT-208ENST00000469602 TRIM37O94972 964 aa13.29□□□□□ -0.28
SRRT-208ENST00000469602 NBPF6Q5VWK0 638 aa13.29□□□□□ -0.28
SRRT-208ENST00000469602 MARCH10Q8NA82 808 aaPredicted RBP13.29□□□□□ -0.28
SRRT-208ENST00000469602 NBPF4Q96M43 638 aa13.29□□□□□ -0.28
SRRT-208ENST00000469602 DEFB132Q7Z7B7 95 aa13.28□□□□□ -0.28
SRRT-208ENST00000469602 BCL9O00512 1426 aa13.28□□□□□ -0.28
SRRT-208ENST00000469602 SHANK3Q9BYB0 1731 aa13.27□□□□□ -0.28
SRRT-208ENST00000469602 BAG6P46379 1132 aa13.27□□□□□ -0.29
SRRT-208ENST00000469602 USHBP1Q8N6Y0 703 aa13.27□□□□□ -0.29
SRRT-208ENST00000469602 NPC1L1Q9UHC9 1359 aa13.27□□□□□ -0.29
SRRT-208ENST00000469602 MEGF6O75095 1541 aa13.27□□□□□ -0.29
SRRT-208ENST00000469602 KAT6BQ8WYB5 2073 aa13.27□□□□□ -0.29
SRRT-208ENST00000469602 NCAPD2Q15021 1401 aa13.26□□□□□ -0.29
SRRT-208ENST00000469602 CC2D1BQ5T0F9 858 aaKnown RBP13.25□□□□□ -0.29
SRRT-208ENST00000469602 APBA3O96018 575 aa13.24□□□□□ -0.29
SRRT-208ENST00000469602 ZEB1P37275 1124 aaPredicted RBP13.24□□□□□ -0.29
SRRT-208ENST00000469602 EIF4A2Q14240 407 aaKnown RBP13.24□□□□□ -0.29
SRRT-208ENST00000469602 RAPGEF4Q8WZA2 1011 aa13.24□□□□□ -0.29
SRRT-208ENST00000469602 RGPD3A6NKT7 1758 aaPredicted RBP13.24□□□□□ -0.29
SRRT-208ENST00000469602 RGPD4Q7Z3J3 1758 aa13.24□□□□□ -0.29
SRRT-208ENST00000469602 NHSQ6T4R5 1651 aa13.24□□□□□ -0.29
SRRT-208ENST00000469602 PKD1L3Q7Z443 1732 aa13.23□□□□□ -0.29
SRRT-208ENST00000469602 EN1Q05925 392 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms