RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 SOX12O15370 315 aa32.06■■■□□ 2.72
SUMO3-205ENST00000466861 CCDC9Q9Y3X0 531 aaKnown RBP32.05■■■□□ 2.72
SUMO3-205ENST00000466861 NSD2O96028 1365 aa32.05■■■□□ 2.72
SUMO3-205ENST00000466861 RGS12O14924 1447 aa32.04■■■□□ 2.72
SUMO3-205ENST00000466861 ONECUT3O60422 494 aaPredicted RBP32.04■■■□□ 2.72
SUMO3-205ENST00000466861 ANKRD26Q9UPS8 1709 aa32.03■■■□□ 2.72
SUMO3-205ENST00000466861 ZBTB7CA1YPR0 619 aa32.02■■■□□ 2.72
SUMO3-205ENST00000466861 STRN4Q9NRL3 753 aa32.02■■■□□ 2.72
SUMO3-205ENST00000466861 SOCS7O14512 581 aa32.01■■■□□ 2.71
SUMO3-205ENST00000466861 SPATA31A1Q5TZJ5 1347 aa32■■■□□ 2.71
SUMO3-205ENST00000466861 RGPD5Q99666 1765 aa32■■■□□ 2.71
SUMO3-205ENST00000466861 AXIN2Q9Y2T1 843 aa32■■■□□ 2.71
SUMO3-205ENST00000466861 KNSTRNQ9Y448 316 aa32■■■□□ 2.71
SUMO3-205ENST00000466861 BLMP54132 1417 aaPredicted RBP32■■■□□ 2.71
SUMO3-205ENST00000466861 KIF24Q5T7B8 1368 aa31.98■■■□□ 2.71
SUMO3-205ENST00000466861 THRAP3Q9Y2W1 955 aaKnown RBP31.98■■■□□ 2.71
SUMO3-205ENST00000466861 CRB1P82279 1406 aa31.98■■■□□ 2.71
SUMO3-205ENST00000466861 WDR17Q8IZU2 1322 aa31.98■■■□□ 2.71
SUMO3-205ENST00000466861 RTL1A6NKG5 1358 aa31.97■■■□□ 2.71
SUMO3-205ENST00000466861 IP6K1Q92551 441 aa31.97■■■□□ 2.71
SUMO3-205ENST00000466861 LARP1Q6PKG0 1096 aaKnown RBP31.96■■■□□ 2.71
SUMO3-205ENST00000466861 MAP3K19Q56UN5 1328 aa31.96■■■□□ 2.71
SUMO3-205ENST00000466861 BARGINQ6ZT62 677 aa31.95■■■□□ 2.71
SUMO3-205ENST00000466861 PER1O15534 1290 aaPredicted RBP31.93■■■□□ 2.7
SUMO3-205ENST00000466861 TCP11L2Q8N4U5 519 aa31.92■■■□□ 2.7
SUMO3-205ENST00000466861 ERBB3P21860 1342 aa31.92■■■□□ 2.7
SUMO3-205ENST00000466861 AMPHP49418 695 aa31.91■■■□□ 2.7
SUMO3-205ENST00000466861 THSD7AQ9UPZ6 1657 aa31.9■■■□□ 2.7
SUMO3-205ENST00000466861 AMER1Q5JTC6 1135 aaPredicted RBP31.9■■■□□ 2.7
SUMO3-205ENST00000466861 SEPT12Q8IYM1 358 aa31.9■■■□□ 2.7
SUMO3-205ENST00000466861 NPC1L1Q9UHC9 1359 aa31.9■■■□□ 2.7
SUMO3-205ENST00000466861 HOXC9P31274 260 aa31.89■■■□□ 2.7
SUMO3-205ENST00000466861 FAM98CQ17RN3 349 aaKnown RBP31.89■■■□□ 2.7
SUMO3-205ENST00000466861 TOM1L2Q6ZVM7 507 aa31.89■■■□□ 2.7
SUMO3-205ENST00000466861 CARD10Q9BWT7 1032 aa31.89■■■□□ 2.7
SUMO3-205ENST00000466861 FAM208AQ9UK61 1670 aaKnown RBP31.89■■■□□ 2.7
SUMO3-205ENST00000466861 MAP2P11137 1827 aaKnown RBP31.89■■■□□ 2.69
SUMO3-205ENST00000466861 CSB-PGBD3P0DP91 1061 aa31.87■■■□□ 2.69
SUMO3-205ENST00000466861 FBLN1P23142 703 aa31.86■■■□□ 2.69
SUMO3-205ENST00000466861 RRS1Q15050 365 aaKnown RBP31.86■■■□□ 2.69
SUMO3-205ENST00000466861 BRWD3Q6RI45 1802 aa31.86■■■□□ 2.69
SUMO3-205ENST00000466861 FLT4P35916 1363 aa31.85■■■□□ 2.69
SUMO3-205ENST00000466861 ANKRD24Q8TF21 1146 aa31.85■■■□□ 2.69
SUMO3-205ENST00000466861 CDCA7Q9BWT1 371 aaPredicted RBP31.84■■■□□ 2.69
SUMO3-205ENST00000466861 INSRP06213 1382 aa31.83■■■□□ 2.69
SUMO3-205ENST00000466861 MORC1Q86VD1 984 aa31.83■■■□□ 2.69
SUMO3-205ENST00000466861 USP35Q9P2H5 1018 aa31.83■■■□□ 2.69
SUMO3-205ENST00000466861 PEAK1Q9H792 1746 aa31.8■■■□□ 2.68
SUMO3-205ENST00000466861 A0A0G2JS52 829 aa31.8■■■□□ 2.68
SUMO3-205ENST00000466861 MYT1Q01538 1121 aa31.8■■■□□ 2.68
SUMO3-205ENST00000466861 PARP4Q9UKK3 1724 aaKnown RBP31.8■■■□□ 2.68
SUMO3-205ENST00000466861 WNK3Q9BYP7 1800 aa31.79■■■□□ 2.68
SUMO3-205ENST00000466861 POLKQ9UBT6 870 aa31.79■■■□□ 2.68
SUMO3-205ENST00000466861 SMG6Q86US8 1419 aaKnown RBP31.78■■■□□ 2.68
SUMO3-205ENST00000466861 KRT27Q7Z3Y8 459 aa31.78■■■□□ 2.68
SUMO3-205ENST00000466861 EMILIN1Q9Y6C2 1016 aa31.77■■■□□ 2.68
SUMO3-205ENST00000466861 NLRP2Q9NX02 1062 aa31.76■■■□□ 2.67
SUMO3-205ENST00000466861 DISP2A7MBM2 1401 aa31.75■■■□□ 2.67
SUMO3-205ENST00000466861 HSP90AB2PQ58FF8 381 aa31.74■■■□□ 2.67
SUMO3-205ENST00000466861 TNNT2P45379 298 aaPredicted RBP31.71■■■□□ 2.67
SUMO3-205ENST00000466861 LTV1Q96GA3 475 aaPredicted RBP31.71■■■□□ 2.67
SUMO3-205ENST00000466861 UPF1Q92900 1129 aaKnown RBP eCLIP31.69■■■□□ 2.66
SUMO3-205ENST00000466861 PPM1GO15355 546 aaPredicted RBP31.68■■■□□ 2.66
SUMO3-205ENST00000466861 PDE3BQ13370 1112 aa31.68■■■□□ 2.66
SUMO3-205ENST00000466861 CCDC125Q86Z20 511 aa31.68■■■□□ 2.66
SUMO3-205ENST00000466861 RGPD2P0DJD1 1756 aa31.67■■■□□ 2.66
SUMO3-205ENST00000466861 IL2RBP14784 551 aa31.67■■■□□ 2.66
SUMO3-205ENST00000466861 CC2D1BQ5T0F9 858 aaKnown RBP31.67■■■□□ 2.66
SUMO3-205ENST00000466861 LRRC37A3O60309 1634 aa31.67■■■□□ 2.66
SUMO3-205ENST00000466861 DDB1Q16531 1140 aa31.66■■■□□ 2.66
SUMO3-205ENST00000466861 NBPF6Q5VWK0 638 aa31.63■■■□□ 2.65
SUMO3-205ENST00000466861 NBPF4Q96M43 638 aa31.63■■■□□ 2.65
SUMO3-205ENST00000466861 EXOC5O00471 708 aa31.62■■■□□ 2.65
SUMO3-205ENST00000466861 NCAPD2Q15021 1401 aa31.62■■■□□ 2.65
SUMO3-205ENST00000466861 FAM196AQ6ZSG2 479 aa31.62■■■□□ 2.65
SUMO3-205ENST00000466861 TNS2Q63HR2 1409 aa31.61■■■□□ 2.65
SUMO3-205ENST00000466861 BCL9O00512 1426 aa31.58■■■□□ 2.65
SUMO3-205ENST00000466861 EIF4A2Q14240 407 aaKnown RBP31.57■■■□□ 2.64
SUMO3-205ENST00000466861 OVOS2A0A0G2JMS6 1433 aa31.57■■■□□ 2.64
SUMO3-205ENST00000466861 MTHFSP49914 203 aa31.56■■■□□ 2.64
SUMO3-205ENST00000466861 PLEKHG2Q9H7P9 1386 aa31.55■■■□□ 2.64
SUMO3-205ENST00000466861 DDX10Q13206 875 aaKnown RBP31.54■■■□□ 2.64
SUMO3-205ENST00000466861 RAPGEF4Q8WZA2 1011 aa31.54■■■□□ 2.64
SUMO3-205ENST00000466861 EYA1Q99502 592 aa31.54■■■□□ 2.64
SUMO3-205ENST00000466861 EP400Q96L91 3159 aa31.53■■■□□ 2.64
SUMO3-205ENST00000466861 RGPD1P0DJD0 1748 aa31.52■■■□□ 2.64
SUMO3-205ENST00000466861 IGSF1Q8N6C5 1336 aa31.5■■■□□ 2.63
SUMO3-205ENST00000466861 MEGF6O75095 1541 aa31.5■■■□□ 2.63
SUMO3-205ENST00000466861 TATP17735 454 aaPredicted RBP31.5■■■□□ 2.63
SUMO3-205ENST00000466861 MARCH10Q8NA82 808 aaPredicted RBP31.5■■■□□ 2.63
SUMO3-205ENST00000466861 ZNF316A6NFI3 1004 aaPredicted RBP31.49■■■□□ 2.63
SUMO3-205ENST00000466861 SF3B2Q13435 895 aaKnown RBP31.49■■■□□ 2.63
SUMO3-205ENST00000466861 FAM182BQ5T319 152 aa31.49■■■□□ 2.63
SUMO3-205ENST00000466861 USHBP1Q8N6Y0 703 aa31.49■■■□□ 2.63
SUMO3-205ENST00000466861 PARD3Q8TEW0 1356 aa31.48■■■□□ 2.63
SUMO3-205ENST00000466861 IL13P35225 146 aa31.47■■■□□ 2.63
SUMO3-205ENST00000466861 ZCRB1Q8TBF4 217 aaKnown RBP31.47■■■□□ 2.63
SUMO3-205ENST00000466861 SBF2Q86WG5 1849 aa31.47■■■□□ 2.63
SUMO3-205ENST00000466861 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.45■■■□□ 2.63
SUMO3-205ENST00000466861 PPP2R1AP30153 589 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms