RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 ANKRD26Q9UPS8 1709 aa19.72■□□□□ 0.75
DNMT3A-208ENST00000466601 AXIN2Q9Y2T1 843 aa19.72■□□□□ 0.75
DNMT3A-208ENST00000466601 LMO7Q8WWI1 1683 aa19.71■□□□□ 0.75
DNMT3A-208ENST00000466601 CNGB1Q14028 1251 aaPredicted RBP19.71■□□□□ 0.75
DNMT3A-208ENST00000466601 STRN4Q9NRL3 753 aa19.71■□□□□ 0.75
DNMT3A-208ENST00000466601 COL18A1P39060 1754 aa19.7■□□□□ 0.74
DNMT3A-208ENST00000466601 ATRNO75882 1429 aa19.7■□□□□ 0.74
DNMT3A-208ENST00000466601 AMPHP49418 695 aa19.7■□□□□ 0.74
DNMT3A-208ENST00000466601 VPS72Q15906 364 aa19.7■□□□□ 0.74
DNMT3A-208ENST00000466601 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.7■□□□□ 0.74
DNMT3A-208ENST00000466601 IP6K1Q92551 441 aa19.69■□□□□ 0.74
DNMT3A-208ENST00000466601 LTN1O94822 1766 aa19.69■□□□□ 0.74
DNMT3A-208ENST00000466601 NRAPQ86VF7 1730 aa19.68■□□□□ 0.74
DNMT3A-208ENST00000466601 ABCC6O95255 1503 aa19.68■□□□□ 0.74
DNMT3A-208ENST00000466601 HOXC9P31274 260 aa19.68■□□□□ 0.74
DNMT3A-208ENST00000466601 CCDC9Q9Y3X0 531 aaKnown RBP19.68■□□□□ 0.74
DNMT3A-208ENST00000466601 COL5A2P05997 1499 aaPredicted RBP19.67■□□□□ 0.74
DNMT3A-208ENST00000466601 RXRBP28702 533 aa19.67■□□□□ 0.74
DNMT3A-208ENST00000466601 GJD4Q96KN9 370 aaPredicted RBP19.67■□□□□ 0.74
DNMT3A-208ENST00000466601 POLKQ9UBT6 870 aa19.67■□□□□ 0.74
DNMT3A-208ENST00000466601 EMILIN1Q9Y6C2 1016 aa19.67■□□□□ 0.74
DNMT3A-208ENST00000466601 RBM6P78332 1123 aaKnown RBP19.66■□□□□ 0.74
DNMT3A-208ENST00000466601 LARP1Q6PKG0 1096 aaKnown RBP19.66■□□□□ 0.74
DNMT3A-208ENST00000466601 RTL1A6NKG5 1358 aa19.66■□□□□ 0.74
DNMT3A-208ENST00000466601 PPM1GO15355 546 aaPredicted RBP19.65■□□□□ 0.74
DNMT3A-208ENST00000466601 KIF24Q5T7B8 1368 aa19.65■□□□□ 0.74
DNMT3A-208ENST00000466601 BLMP54132 1417 aaPredicted RBP19.65■□□□□ 0.74
DNMT3A-208ENST00000466601 CSB-PGBD3P0DP91 1061 aa19.64■□□□□ 0.73
DNMT3A-208ENST00000466601 ANKRD24Q8TF21 1146 aa19.64■□□□□ 0.73
DNMT3A-208ENST00000466601 SPATA31A5Q5VU36 1347 aa19.64■□□□□ 0.73
DNMT3A-208ENST00000466601 SPATA31A7Q8IWB4 1347 aa19.64■□□□□ 0.73
DNMT3A-208ENST00000466601 RGPD5Q99666 1765 aa19.64■□□□□ 0.73
DNMT3A-208ENST00000466601 MAP2P11137 1827 aaKnown RBP19.63■□□□□ 0.73
DNMT3A-208ENST00000466601 FLT4P35916 1363 aa19.63■□□□□ 0.73
DNMT3A-208ENST00000466601 WDR17Q8IZU2 1322 aa19.63■□□□□ 0.73
DNMT3A-208ENST00000466601 ERBB3P21860 1342 aa19.62■□□□□ 0.73
DNMT3A-208ENST00000466601 SPATA31A1Q5TZJ5 1347 aa19.62■□□□□ 0.73
DNMT3A-208ENST00000466601 HSP90AB2PQ58FF8 381 aa19.62■□□□□ 0.73
DNMT3A-208ENST00000466601 TOM1L2Q6ZVM7 507 aa19.62■□□□□ 0.73
DNMT3A-208ENST00000466601 LTV1Q96GA3 475 aaPredicted RBP19.62■□□□□ 0.73
DNMT3A-208ENST00000466601 INSRP06213 1382 aa19.61■□□□□ 0.73
DNMT3A-208ENST00000466601 USP35Q9P2H5 1018 aa19.61■□□□□ 0.73
DNMT3A-208ENST00000466601 PEAK1Q9H792 1746 aa19.61■□□□□ 0.73
DNMT3A-208ENST00000466601 CRB1P82279 1406 aa19.6■□□□□ 0.73
DNMT3A-208ENST00000466601 GLI3P10071 1580 aa19.6■□□□□ 0.73
DNMT3A-208ENST00000466601 SMG6Q86US8 1419 aaKnown RBP19.59■□□□□ 0.73
DNMT3A-208ENST00000466601 MTHFSP49914 203 aa19.58■□□□□ 0.72
DNMT3A-208ENST00000466601 TCP11L2Q8N4U5 519 aa19.58■□□□□ 0.72
DNMT3A-208ENST00000466601 CARD10Q9BWT7 1032 aa19.58■□□□□ 0.72
DNMT3A-208ENST00000466601 NLRP2Q9NX02 1062 aa19.58■□□□□ 0.72
DNMT3A-208ENST00000466601 FAM98CQ17RN3 349 aaKnown RBP19.57■□□□□ 0.72
DNMT3A-208ENST00000466601 THRAP3Q9Y2W1 955 aaKnown RBP19.57■□□□□ 0.72
DNMT3A-208ENST00000466601 ONECUT3O60422 494 aaPredicted RBP19.56■□□□□ 0.72
DNMT3A-208ENST00000466601 PARD3Q8TEW0 1356 aa19.56■□□□□ 0.72
DNMT3A-208ENST00000466601 CDK12Q9NYV4 1490 aaPredicted RBP19.55■□□□□ 0.72
DNMT3A-208ENST00000466601 PPP2R1AP30153 589 aa19.55■□□□□ 0.72
DNMT3A-208ENST00000466601 BARGINQ6ZT62 677 aa19.55■□□□□ 0.72
DNMT3A-208ENST00000466601 RALBP1Q15311 655 aa19.54■□□□□ 0.72
DNMT3A-208ENST00000466601 RGS12O14924 1447 aa19.53■□□□□ 0.72
DNMT3A-208ENST00000466601 A0A0G2JS52 829 aa19.53■□□□□ 0.72
DNMT3A-208ENST00000466601 MYT1Q01538 1121 aa19.53■□□□□ 0.72
DNMT3A-208ENST00000466601 EIF4A2Q14240 407 aaKnown RBP19.53■□□□□ 0.72
DNMT3A-208ENST00000466601 NBPF6Q5VWK0 638 aa19.53■□□□□ 0.72
DNMT3A-208ENST00000466601 SEPT12Q8IYM1 358 aa19.53■□□□□ 0.72
DNMT3A-208ENST00000466601 NBPF4Q96M43 638 aa19.53■□□□□ 0.72
DNMT3A-208ENST00000466601 FAM208AQ9UK61 1670 aaKnown RBP19.51■□□□□ 0.71
DNMT3A-208ENST00000466601 USHBP1Q8N6Y0 703 aa19.49■□□□□ 0.71
DNMT3A-208ENST00000466601 EYA1Q99502 592 aa19.49■□□□□ 0.71
DNMT3A-208ENST00000466601 CDCA7Q9BWT1 371 aaPredicted RBP19.49■□□□□ 0.71
DNMT3A-208ENST00000466601 RGPD2P0DJD1 1756 aa19.48■□□□□ 0.71
DNMT3A-208ENST00000466601 IL13P35225 146 aa19.48■□□□□ 0.71
DNMT3A-208ENST00000466601 CFAP53Q96M91 514 aa19.48■□□□□ 0.71
DNMT3A-208ENST00000466601 PRKRIP1Q9H875 184 aaPredicted RBP19.48■□□□□ 0.71
DNMT3A-208ENST00000466601 THSD7AQ9UPZ6 1657 aa19.47■□□□□ 0.71
DNMT3A-208ENST00000466601 IL2RBP14784 551 aa19.47■□□□□ 0.71
DNMT3A-208ENST00000466601 DISP2A7MBM2 1401 aa19.46■□□□□ 0.71
DNMT3A-208ENST00000466601 DIAPH1O60610 1272 aaKnown RBP19.46■□□□□ 0.71
DNMT3A-208ENST00000466601 IGSF1Q8N6C5 1336 aa19.45■□□□□ 0.7
DNMT3A-208ENST00000466601 MYBBP1AQ9BQG0 1328 aaKnown RBP19.45■□□□□ 0.7
DNMT3A-208ENST00000466601 DDB1Q16531 1140 aa19.44■□□□□ 0.7
DNMT3A-208ENST00000466601 KRT27Q7Z3Y8 459 aa19.44■□□□□ 0.7
DNMT3A-208ENST00000466601 COL3A1P02461 1466 aaPredicted RBP19.43■□□□□ 0.7
DNMT3A-208ENST00000466601 EXOC5O00471 708 aa19.43■□□□□ 0.7
DNMT3A-208ENST00000466601 RAPGEF4Q8WZA2 1011 aa19.43■□□□□ 0.7
DNMT3A-208ENST00000466601 NCAPD2Q15021 1401 aa19.42■□□□□ 0.7
DNMT3A-208ENST00000466601 WNK3Q9BYP7 1800 aa19.42■□□□□ 0.7
DNMT3A-208ENST00000466601 ANP32CO43423 234 aa19.42■□□□□ 0.7
DNMT3A-208ENST00000466601 PDE3BQ13370 1112 aa19.42■□□□□ 0.7
DNMT3A-208ENST00000466601 PARP4Q9UKK3 1724 aaKnown RBP19.42■□□□□ 0.7
DNMT3A-208ENST00000466601 BRWD3Q6RI45 1802 aa19.41■□□□□ 0.7
DNMT3A-208ENST00000466601 TATP17735 454 aaPredicted RBP19.41■□□□□ 0.7
DNMT3A-208ENST00000466601 SULT6B1Q6IMI4 303 aa19.4■□□□□ 0.7
DNMT3A-208ENST00000466601 MEGF6O75095 1541 aa19.4■□□□□ 0.7
DNMT3A-208ENST00000466601 U2SURPO15042 1029 aaKnown RBP19.39■□□□□ 0.69
DNMT3A-208ENST00000466601 NUDCQ9Y266 331 aa19.39■□□□□ 0.69
DNMT3A-208ENST00000466601 LRRC37A3O60309 1634 aa19.39■□□□□ 0.69
DNMT3A-208ENST00000466601 AEBP1Q8IUX7 1158 aa19.38■□□□□ 0.69
DNMT3A-208ENST00000466601 RGPD1P0DJD0 1748 aa19.37■□□□□ 0.69
DNMT3A-208ENST00000466601 OVOS2A0A0G2JMS6 1433 aa19.37■□□□□ 0.69
DNMT3A-208ENST00000466601 TNS2Q63HR2 1409 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms