RNA–Protein interactions for RNA: ENST00000465741.1

SPTA1-203, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-203ENST00000465741 ZBBXA8MT70 800 aa11.05□□□□□ -0.64
SPTA1-203ENST00000465741 CFTRP13569 1480 aa11.05□□□□□ -0.64
SPTA1-203ENST00000465741 HDGFL1Q5TGJ6 251 aa11.04□□□□□ -0.64
SPTA1-203ENST00000465741 ZNF592Q92610 1267 aa11.04□□□□□ -0.64
SPTA1-203ENST00000465741 GPSM3Q9Y4H4 160 aa11.04□□□□□ -0.64
SPTA1-203ENST00000465741 ERCC6Q03468 1493 aa11.04□□□□□ -0.64
SPTA1-203ENST00000465741 AVPP01185 164 aa11.03□□□□□ -0.64
SPTA1-203ENST00000465741 PTK2Q05397 1052 aa11.03□□□□□ -0.64
SPTA1-203ENST00000465741 SEMA3FQ13275 785 aa11.03□□□□□ -0.64
SPTA1-203ENST00000465741 UNC93B1Q9H1C4 597 aa11.03□□□□□ -0.64
SPTA1-203ENST00000465741 PDXDC2PQ6P474 469 aa11.02□□□□□ -0.65
SPTA1-203ENST00000465741 RPIAP49247 311 aa11.01□□□□□ -0.65
SPTA1-203ENST00000465741 ALG2Q9H553 416 aa11.01□□□□□ -0.65
SPTA1-203ENST00000465741 FCF1Q9Y324 198 aaKnown RBP11.01□□□□□ -0.65
SPTA1-203ENST00000465741 NESP48681 1621 aa11.01□□□□□ -0.65
SPTA1-203ENST00000465741 FBXO45P0C2W1 286 aa11□□□□□ -0.65
SPTA1-203ENST00000465741 GMPR2Q9P2T1 348 aaKnown RBP11□□□□□ -0.65
SPTA1-203ENST00000465741 ADAMTS19Q8TE59 1207 aa10.98□□□□□ -0.65
SPTA1-203ENST00000465741 MCCD1P59942 119 aaPredicted RBP10.97□□□□□ -0.65
SPTA1-203ENST00000465741 PTCRAQ6ISU1 281 aaPredicted RBP10.96□□□□□ -0.65
SPTA1-203ENST00000465741 ARHGAP9Q9BRR9 750 aa10.96□□□□□ -0.65
SPTA1-203ENST00000465741 CUX2O14529 1486 aa10.95□□□□□ -0.66
SPTA1-203ENST00000465741 PDS5BQ9NTI5 1447 aa10.95□□□□□ -0.66
SPTA1-203ENST00000465741 LCE2CQ5TA81 110 aa10.95□□□□□ -0.66
SPTA1-203ENST00000465741 AXIN1O15169 862 aa10.94□□□□□ -0.66
SPTA1-203ENST00000465741 ZBTB24O43167 697 aaPredicted RBP10.94□□□□□ -0.66
SPTA1-203ENST00000465741 NFX1Q12986 1120 aaKnown RBP10.94□□□□□ -0.66
SPTA1-203ENST00000465741 ZBTB33Q86T24 672 aa10.94□□□□□ -0.66
SPTA1-203ENST00000465741 SMCPP49901 116 aaPredicted RBP10.93□□□□□ -0.66
SPTA1-203ENST00000465741 SH3BP5LQ7L8J4 393 aa10.93□□□□□ -0.66
SPTA1-203ENST00000465741 BPHLQ86WA6 291 aaPredicted RBP10.93□□□□□ -0.66
SPTA1-203ENST00000465741 CYP4X1Q8N118 509 aa10.93□□□□□ -0.66
SPTA1-203ENST00000465741 FANCD2Q9BXW9 1451 aa10.93□□□□□ -0.66
SPTA1-203ENST00000465741 WRNQ14191 1432 aaPredicted RBP eCLIP10.92□□□□□ -0.66
SPTA1-203ENST00000465741 PPP1R15AO75807 674 aaPredicted RBP10.92□□□□□ -0.66
SPTA1-203ENST00000465741 WFS1O76024 890 aa10.92□□□□□ -0.66
SPTA1-203ENST00000465741 CD2BP2O95400 341 aaKnown RBP10.92□□□□□ -0.66
SPTA1-203ENST00000465741 AGERQ15109 404 aa10.92□□□□□ -0.66
SPTA1-203ENST00000465741 BAP1Q92560 729 aa10.92□□□□□ -0.66
SPTA1-203ENST00000465741 PPP1R12CQ9BZL4 782 aa10.92□□□□□ -0.66
SPTA1-203ENST00000465741 C11orf95C9JLR9 678 aaPredicted RBP10.91□□□□□ -0.66
SPTA1-203ENST00000465741 CTC1Q2NKJ3 1217 aa10.91□□□□□ -0.66
SPTA1-203ENST00000465741 ZNF511Q8NB15 262 aa10.91□□□□□ -0.66
SPTA1-203ENST00000465741 PCDHB9Q9Y5E1 797 aa10.91□□□□□ -0.66
SPTA1-203ENST00000465741 ABCC8Q09428 1581 aa10.9□□□□□ -0.66
SPTA1-203ENST00000465741 ADAM32Q8TC27 787 aa10.9□□□□□ -0.66
SPTA1-203ENST00000465741 PALM3A6NDB9 673 aaPredicted RBP10.89□□□□□ -0.67
SPTA1-203ENST00000465741 LINC01559Q495D7 138 aa10.89□□□□□ -0.67
SPTA1-203ENST00000465741 SH3RF1Q7Z6J0 888 aa10.89□□□□□ -0.67
SPTA1-203ENST00000465741 FAM9AQ8IZU1 332 aaPredicted RBP10.89□□□□□ -0.67
SPTA1-203ENST00000465741 UCN2Q96RP3 112 aa10.89□□□□□ -0.67
SPTA1-203ENST00000465741 OCSTAMPQ9BR26 566 aa10.89□□□□□ -0.67
SPTA1-203ENST00000465741 MAGEB6P1A0A0J9YX57 407 aa10.88□□□□□ -0.67
SPTA1-203ENST00000465741 SMPD1P17405 629 aa10.88□□□□□ -0.67
SPTA1-203ENST00000465741 DZIP3Q86Y13 1208 aaKnown RBP10.88□□□□□ -0.67
SPTA1-203ENST00000465741 NFATC2IPQ8NCF5 419 aa10.88□□□□□ -0.67
SPTA1-203ENST00000465741 CARD14Q9BXL6 1004 aa10.88□□□□□ -0.67
SPTA1-203ENST00000465741 LAMC3Q9Y6N6 1575 aa10.88□□□□□ -0.67
SPTA1-203ENST00000465741 CFAP70Q5T0N1 1121 aa10.87□□□□□ -0.67
SPTA1-203ENST00000465741 PBXIP1Q96AQ6 731 aa10.87□□□□□ -0.67
SPTA1-203ENST00000465741 TFIP11Q9UBB9 837 aaKnown RBP10.87□□□□□ -0.67
SPTA1-203ENST00000465741 ACIN1Q9UKV3 1341 aaKnown RBP10.86□□□□□ -0.67
SPTA1-203ENST00000465741 WIPF1O43516 503 aa10.86□□□□□ -0.67
SPTA1-203ENST00000465741 ATP9BO43861 1147 aa10.86□□□□□ -0.67
SPTA1-203ENST00000465741 TRIM32Q13049 653 aa10.86□□□□□ -0.67
SPTA1-203ENST00000465741 SLFNL1Q499Z3 407 aa10.86□□□□□ -0.67
SPTA1-203ENST00000465741 SNRPBP14678 240 aaKnown RBP10.85□□□□□ -0.67
SPTA1-203ENST00000465741 LMOD1P29536 600 aaPredicted RBP10.85□□□□□ -0.67
SPTA1-203ENST00000465741 SH3BP2P78314 561 aa10.85□□□□□ -0.67
SPTA1-203ENST00000465741 CEP126Q9P2H0 1117 aa10.85□□□□□ -0.67
SPTA1-203ENST00000465741 WNT7AO00755 349 aa10.84□□□□□ -0.67
SPTA1-203ENST00000465741 RFX1P22670 979 aa10.84□□□□□ -0.67
SPTA1-203ENST00000465741 WNT7BP56706 349 aa10.84□□□□□ -0.67
SPTA1-203ENST00000465741 FOXJ1Q92949 421 aa10.84□□□□□ -0.67
SPTA1-203ENST00000465741 SLC10A4Q96EP9 437 aa10.84□□□□□ -0.67
SPTA1-203ENST00000465741 CDV3Q9UKY7 258 aaKnown RBP10.84□□□□□ -0.67
SPTA1-203ENST00000465741 CEP164Q9UPV0 1460 aa10.84□□□□□ -0.67
SPTA1-203ENST00000465741 TTC24A2A3L6 582 aaPredicted RBP10.83□□□□□ -0.68
SPTA1-203ENST00000465741 ERFEQ4G0M1 354 aa10.83□□□□□ -0.68
SPTA1-203ENST00000465741 TBC1D9Q6ZT07 1266 aa10.83□□□□□ -0.68
SPTA1-203ENST00000465741 RNF135Q8IUD6 432 aa10.83□□□□□ -0.68
SPTA1-203ENST00000465741 ATP13A2Q9NQ11 1180 aa10.83□□□□□ -0.68
SPTA1-203ENST00000465741 MAFBQ9Y5Q3 323 aaPredicted RBP10.83□□□□□ -0.68
SPTA1-203ENST00000465741 KIF21AQ7Z4S6 1674 aa10.82□□□□□ -0.68
SPTA1-203ENST00000465741 J3QL48 77 aa10.82□□□□□ -0.68
SPTA1-203ENST00000465741 SKIP12755 728 aa10.82□□□□□ -0.68
SPTA1-203ENST00000465741 NBPF20Q3BBV1 942 aa10.82□□□□□ -0.68
SPTA1-203ENST00000465741 CUX1P39880 1505 aa10.81□□□□□ -0.68
SPTA1-203ENST00000465741 TRMT44Q8IYL2 757 aaKnown RBP10.81□□□□□ -0.68
SPTA1-203ENST00000465741 SNIP1Q8TAD8 396 aaKnown RBP10.81□□□□□ -0.68
SPTA1-203ENST00000465741 MRGPRX2Q96LB1 330 aa10.81□□□□□ -0.68
SPTA1-203ENST00000465741 C1QTNF2Q9BXJ5 285 aa10.81□□□□□ -0.68
SPTA1-203ENST00000465741 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.8□□□□□ -0.68
SPTA1-203ENST00000465741 PIK3CDO00329 1044 aa10.8□□□□□ -0.68
SPTA1-203ENST00000465741 VARSP26640 1264 aaKnown RBP10.8□□□□□ -0.68
SPTA1-203ENST00000465741 PDE4CQ08493 712 aa10.8□□□□□ -0.68
SPTA1-203ENST00000465741 C4orf48Q5BLP8 95 aa10.8□□□□□ -0.68
SPTA1-203ENST00000465741 RNF20Q5VTR2 975 aa10.8□□□□□ -0.68
SPTA1-203ENST00000465741 STK17AQ9UEE5 414 aa10.8□□□□□ -0.68
SPTA1-203ENST00000465741 LZTS3O60299 673 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms