RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 ARHGAP9Q9BRR9 750 aa10.97□□□□□ -0.65
UBR4-209ENST00000465036 FAM117AQ9C073 453 aa10.97□□□□□ -0.65
UBR4-209ENST00000465036 GPSM3Q9Y4H4 160 aa10.97□□□□□ -0.65
UBR4-209ENST00000465036 SOS2Q07890 1332 aaPredicted RBP10.97□□□□□ -0.65
UBR4-209ENST00000465036 C6orf118Q5T5N4 469 aa10.96□□□□□ -0.65
UBR4-209ENST00000465036 ZSCAN1Q8NBB4 408 aa10.96□□□□□ -0.65
UBR4-209ENST00000465036 PROCA1Q8NCQ7 364 aaPredicted RBP10.96□□□□□ -0.65
UBR4-209ENST00000465036 CARD14Q9BXL6 1004 aa10.96□□□□□ -0.65
UBR4-209ENST00000465036 SOBPA7XYQ1 873 aa10.95□□□□□ -0.66
UBR4-209ENST00000465036 FBXO31Q5XUX0 539 aaPredicted RBP10.95□□□□□ -0.66
UBR4-209ENST00000465036 Q6ZVU0 165 aa10.94□□□□□ -0.66
UBR4-209ENST00000465036 BCANQ96GW7 911 aa10.94□□□□□ -0.66
UBR4-209ENST00000465036 GPBP1L1Q9HC44 474 aaPredicted RBP10.94□□□□□ -0.66
UBR4-209ENST00000465036 PGPEP1Q9NXJ5 209 aa10.94□□□□□ -0.66
UBR4-209ENST00000465036 PPP1R26Q5T8A7 1209 aaPredicted RBP10.93□□□□□ -0.66
UBR4-209ENST00000465036 SLC10A4Q96EP9 437 aa10.93□□□□□ -0.66
UBR4-209ENST00000465036 PTK2Q05397 1052 aa10.92□□□□□ -0.66
UBR4-209ENST00000465036 DHX9Q08211 1270 aaKnown RBP10.92□□□□□ -0.66
UBR4-209ENST00000465036 NR6A1Q15406 480 aa10.92□□□□□ -0.66
UBR4-209ENST00000465036 KCTD15Q96SI1 283 aaPredicted RBP10.92□□□□□ -0.66
UBR4-209ENST00000465036 ZBTB33Q86T24 672 aa10.91□□□□□ -0.66
UBR4-209ENST00000465036 PNMA1Q8ND90 353 aa10.91□□□□□ -0.66
UBR4-209ENST00000465036 DNMT3LQ9UJW3 386 aa10.91□□□□□ -0.66
UBR4-209ENST00000465036 PPFIA3O75145 1194 aa10.9□□□□□ -0.66
UBR4-209ENST00000465036 OCSTAMPQ9BR26 566 aa10.9□□□□□ -0.66
UBR4-209ENST00000465036 GOPCQ9HD26 462 aa10.9□□□□□ -0.66
UBR4-209ENST00000465036 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.89□□□□□ -0.673e-8■■□□□ 12
UBR4-209ENST00000465036 SPINT1O43278 529 aa10.88□□□□□ -0.67
UBR4-209ENST00000465036 AP1G2O75843 785 aa10.88□□□□□ -0.67
UBR4-209ENST00000465036 TTLL8A6PVC2 850 aa10.87□□□□□ -0.67
UBR4-209ENST00000465036 INTS6LQ5JSJ4 861 aaKnown RBP10.86□□□□□ -0.67
UBR4-209ENST00000465036 USP17L8P0C7I0 530 aa10.85□□□□□ -0.67
UBR4-209ENST00000465036 CBLBQ13191 982 aa10.85□□□□□ -0.67
UBR4-209ENST00000465036 NBPF20Q3BBV1 942 aa10.85□□□□□ -0.67
UBR4-209ENST00000465036 ADAM32Q8TC27 787 aa10.85□□□□□ -0.67
UBR4-209ENST00000465036 ATP1B4Q9UN42 357 aaPredicted RBP10.84□□□□□ -0.67
UBR4-209ENST00000465036 RFC5P40937 340 aa10.83□□□□□ -0.68
UBR4-209ENST00000465036 EPS8L1Q8TE68 723 aa10.82□□□□□ -0.68
UBR4-209ENST00000465036 NANOS1Q8WY41 292 aaKnown RBP10.82□□□□□ -0.68
UBR4-209ENST00000465036 HMX1Q9NP08 348 aaPredicted RBP10.82□□□□□ -0.68
UBR4-209ENST00000465036 PTSQ03393 145 aa10.81□□□□□ -0.68
UBR4-209ENST00000465036 TMEM259Q4ZIN3 620 aa10.8□□□□□ -0.68
UBR4-209ENST00000465036 ESPNB1AK53 854 aa10.79□□□□□ -0.68
UBR4-209ENST00000465036 TRIM52Q96A61 297 aa10.79□□□□□ -0.68
UBR4-209ENST00000465036 DZIP3Q86Y13 1208 aaKnown RBP10.78□□□□□ -0.68
UBR4-209ENST00000465036 SEPT12Q8IYM1 358 aa10.78□□□□□ -0.68
UBR4-209ENST00000465036 SLC35F4A4IF30 521 aa10.77□□□□□ -0.69
UBR4-209ENST00000465036 PCMTD1Q96MG8 357 aaPredicted RBP10.77□□□□□ -0.69
UBR4-209ENST00000465036 TRIM34Q9BYJ4 488 aa10.77□□□□□ -0.69
UBR4-209ENST00000465036 FIGNL2A6NMB9 653 aa10.76□□□□□ -0.69
UBR4-209ENST00000465036 CCDC155Q8N6L0 562 aa10.76□□□□□ -0.69
UBR4-209ENST00000465036 LILRA1O75019 489 aa10.75□□□□□ -0.69
UBR4-209ENST00000465036 ADH1AP07327 375 aa10.75□□□□□ -0.69
UBR4-209ENST00000465036 CTSOP43234 321 aaPredicted RBP10.75□□□□□ -0.69
UBR4-209ENST00000465036 CCDC125Q86Z20 511 aa10.75□□□□□ -0.69
UBR4-209ENST00000465036 ZNF784Q8NCA9 323 aaPredicted RBP10.75□□□□□ -0.69
UBR4-209ENST00000465036 AGBL1Q96MI9 1066 aa10.75□□□□□ -0.69
UBR4-209ENST00000465036 ERVH48-1M5A8F1 160 aa10.74□□□□□ -0.69
UBR4-209ENST00000465036 RELBQ01201 579 aa10.74□□□□□ -0.69
UBR4-209ENST00000465036 GPR161Q8N6U8 529 aaKnown RBP10.74□□□□□ -0.69
UBR4-209ENST00000465036 TMPRSS4Q9NRS4 437 aa10.74□□□□□ -0.69
UBR4-209ENST00000465036 RNF217Q8TC41 542 aa10.73□□□□□ -0.69
UBR4-209ENST00000465036 INSM2Q96T92 566 aaPredicted RBP10.73□□□□□ -0.69
UBR4-209ENST00000465036 KRT76Q01546 638 aa10.72□□□□□ -0.69
UBR4-209ENST00000465036 KDF1Q8NAX2 398 aaPredicted RBP10.72□□□□□ -0.69
UBR4-209ENST00000465036 ZBBXA8MT70 800 aa10.71□□□□□ -0.69
UBR4-209ENST00000465036 SOCS7O14512 581 aa10.71□□□□□ -0.69
UBR4-209ENST00000465036 ITGA6P23229 1130 aa10.71□□□□□ -0.69
UBR4-209ENST00000465036 ADD1P35611 737 aaKnown RBP10.71□□□□□ -0.69
UBR4-209ENST00000465036 PTGIRP43119 386 aa10.71□□□□□ -0.69
UBR4-209ENST00000465036 GJD4Q96KN9 370 aaPredicted RBP10.7□□□□□ -0.7
UBR4-209ENST00000465036 POLMQ9NP87 494 aaPredicted RBP10.7□□□□□ -0.7
UBR4-209ENST00000465036 ZNF395Q9H8N7 513 aaPredicted RBP10.69□□□□□ -0.7
UBR4-209ENST00000465036 MCCD1P59942 119 aaPredicted RBP10.68□□□□□ -0.7
UBR4-209ENST00000465036 CNTNAP3BQ96NU0 1288 aa10.68□□□□□ -0.7
UBR4-209ENST00000465036 COL25A1Q9BXS0 654 aaPredicted RBP10.68□□□□□ -0.7
UBR4-209ENST00000465036 CNTNAP3Q9BZ76 1288 aa10.68□□□□□ -0.7
UBR4-209ENST00000465036 SENP3-EIF4A1A0A087X0R7 540 aa10.67□□□□□ -0.7
UBR4-209ENST00000465036 SLC24A1O60721 1099 aa10.67□□□□□ -0.7
UBR4-209ENST00000465036 RAB15P59190 212 aa10.67□□□□□ -0.7
UBR4-209ENST00000465036 KCNMA1Q12791 1236 aa10.67□□□□□ -0.7
UBR4-209ENST00000465036 FOXD4L5Q5VV16 416 aaPredicted RBP10.67□□□□□ -0.7
UBR4-209ENST00000465036 SV2AQ7L0J3 742 aa10.67□□□□□ -0.7
UBR4-209ENST00000465036 RNF144AP50876 292 aaPredicted RBP10.66□□□□□ -0.7
UBR4-209ENST00000465036 NEUROD2Q15784 382 aa10.66□□□□□ -0.7
UBR4-209ENST00000465036 BANK1Q8NDB2 785 aa10.66□□□□□ -0.7
UBR4-209ENST00000465036 ZNF592Q92610 1267 aa10.66□□□□□ -0.7
UBR4-209ENST00000465036 FBXO45P0C2W1 286 aa10.65□□□□□ -0.7
UBR4-209ENST00000465036 SLURP2P0DP57 97 aa10.65□□□□□ -0.7
UBR4-209ENST00000465036 GIGYF1O75420 1035 aaPredicted RBP10.64□□□□□ -0.71
UBR4-209ENST00000465036 RNF20Q5VTR2 975 aa10.64□□□□□ -0.71
UBR4-209ENST00000465036 LYSMD3Q7Z3D4 306 aa10.64□□□□□ -0.71
UBR4-209ENST00000465036 VWA5B2Q8N398 1253 aa10.64□□□□□ -0.71
UBR4-209ENST00000465036 IL27Q8NEV9 243 aa10.64□□□□□ -0.71
UBR4-209ENST00000465036 GPC1P35052 558 aa10.63□□□□□ -0.71
UBR4-209ENST00000465036 RNFT1Q5M7Z0 435 aa10.63□□□□□ -0.71
UBR4-209ENST00000465036 CYLDQ9NQC7 956 aa10.62□□□□□ -0.71
UBR4-209ENST00000465036 PCDHB9Q9Y5E1 797 aa10.62□□□□□ -0.71
UBR4-209ENST00000465036 ATP5J2-PTCD1G3V325 749 aa10.61□□□□□ -0.71
UBR4-209ENST00000465036 ERVK-9P63128 1117 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms