RNA–Protein interactions for RNA: ENST00000464870.5

PTPN7-205, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-205ENST00000464870 NWD2Q9ULI1 1742 aa16.72■□□□□ 0.27
PTPN7-205ENST00000464870 NPC1L1Q9UHC9 1359 aa16.72■□□□□ 0.27
PTPN7-205ENST00000464870 PLCH1Q4KWH8 1693 aa16.72■□□□□ 0.27
PTPN7-205ENST00000464870 SPATA31A5Q5VU36 1347 aa16.71■□□□□ 0.27
PTPN7-205ENST00000464870 SPATA31A7Q8IWB4 1347 aa16.71■□□□□ 0.27
PTPN7-205ENST00000464870 MORC1Q86VD1 984 aa16.71■□□□□ 0.27
PTPN7-205ENST00000464870 AXIN2Q9Y2T1 843 aa16.71■□□□□ 0.27
PTPN7-205ENST00000464870 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.7■□□□□ 0.26
PTPN7-205ENST00000464870 CAMTA1Q9Y6Y1 1673 aa16.7■□□□□ 0.26
PTPN7-205ENST00000464870 PARD3Q8TEW0 1356 aa16.7■□□□□ 0.26
PTPN7-205ENST00000464870 A0A0G2JS52 829 aa16.7■□□□□ 0.26
PTPN7-205ENST00000464870 TNNT2P45379 298 aaPredicted RBP16.7■□□□□ 0.26
PTPN7-205ENST00000464870 MYT1Q01538 1121 aa16.7■□□□□ 0.26
PTPN7-205ENST00000464870 RALBP1Q15311 655 aa16.7■□□□□ 0.26
PTPN7-205ENST00000464870 LARP1Q6PKG0 1096 aaKnown RBP16.7■□□□□ 0.26
PTPN7-205ENST00000464870 NFAT5O94916 1531 aa16.7■□□□□ 0.26
PTPN7-205ENST00000464870 RGS12O14924 1447 aa16.7■□□□□ 0.26
PTPN7-205ENST00000464870 SPATA31A1Q5TZJ5 1347 aa16.7■□□□□ 0.26
PTPN7-205ENST00000464870 ONECUT3O60422 494 aaPredicted RBP16.69■□□□□ 0.26
PTPN7-205ENST00000464870 CSB-PGBD3P0DP91 1061 aa16.69■□□□□ 0.26
PTPN7-205ENST00000464870 FAM98CQ17RN3 349 aaKnown RBP16.69■□□□□ 0.26
PTPN7-205ENST00000464870 USP35Q9P2H5 1018 aa16.69■□□□□ 0.26
PTPN7-205ENST00000464870 TOM1L2Q6ZVM7 507 aa16.68■□□□□ 0.26
PTPN7-205ENST00000464870 SEPT12Q8IYM1 358 aa16.68■□□□□ 0.26
PTPN7-205ENST00000464870 COL5A2P05997 1499 aaPredicted RBP16.67■□□□□ 0.26
PTPN7-205ENST00000464870 NSD2O96028 1365 aa16.67■□□□□ 0.26
PTPN7-205ENST00000464870 USP54Q70EL1 1684 aa16.67■□□□□ 0.26
PTPN7-205ENST00000464870 FBLN1P23142 703 aa16.67■□□□□ 0.26
PTPN7-205ENST00000464870 AMPHP49418 695 aa16.67■□□□□ 0.26
PTPN7-205ENST00000464870 CCDC184Q52MB2 194 aa16.67■□□□□ 0.26
PTPN7-205ENST00000464870 IP6K1Q92551 441 aa16.67■□□□□ 0.26
PTPN7-205ENST00000464870 MAP3K19Q56UN5 1328 aa16.67■□□□□ 0.26
PTPN7-205ENST00000464870 WDR17Q8IZU2 1322 aa16.67■□□□□ 0.26
PTPN7-205ENST00000464870 LMO7Q8WWI1 1683 aa16.66■□□□□ 0.26
PTPN7-205ENST00000464870 GLI3P10071 1580 aa16.66■□□□□ 0.26
PTPN7-205ENST00000464870 PPP2R1AP30153 589 aa16.66■□□□□ 0.26
PTPN7-205ENST00000464870 TCP11L2Q8N4U5 519 aa16.66■□□□□ 0.26
PTPN7-205ENST00000464870 THRAP3Q9Y2W1 955 aaKnown RBP16.66■□□□□ 0.26
PTPN7-205ENST00000464870 KIF20BQ96Q89 1820 aa16.66■□□□□ 0.26
PTPN7-205ENST00000464870 NRAPQ86VF7 1730 aa16.65■□□□□ 0.26
PTPN7-205ENST00000464870 RRS1Q15050 365 aaKnown RBP16.65■□□□□ 0.26
PTPN7-205ENST00000464870 MYBBP1AQ9BQG0 1328 aaKnown RBP16.65■□□□□ 0.26
PTPN7-205ENST00000464870 CRB1P82279 1406 aa16.64■□□□□ 0.25
PTPN7-205ENST00000464870 BARGINQ6ZT62 677 aa16.64■□□□□ 0.25
PTPN7-205ENST00000464870 ANKRD24Q8TF21 1146 aa16.64■□□□□ 0.25
PTPN7-205ENST00000464870 ABCC6O95255 1503 aa16.64■□□□□ 0.25
PTPN7-205ENST00000464870 HOXC9P31274 260 aa16.63■□□□□ 0.25
PTPN7-205ENST00000464870 CARD10Q9BWT7 1032 aa16.63■□□□□ 0.25
PTPN7-205ENST00000464870 BLMP54132 1417 aaPredicted RBP16.62■□□□□ 0.25
PTPN7-205ENST00000464870 KRT27Q7Z3Y8 459 aa16.62■□□□□ 0.25
PTPN7-205ENST00000464870 NLRP2Q9NX02 1062 aa16.62■□□□□ 0.25
PTPN7-205ENST00000464870 ERBB3P21860 1342 aa16.62■□□□□ 0.25
PTPN7-205ENST00000464870 CCER2I3L3R5 266 aa16.61■□□□□ 0.25
PTPN7-205ENST00000464870 LTV1Q96GA3 475 aaPredicted RBP16.61■□□□□ 0.25
PTPN7-205ENST00000464870 RTL1A6NKG5 1358 aa16.61■□□□□ 0.25
PTPN7-205ENST00000464870 ANKRD26Q9UPS8 1709 aa16.6■□□□□ 0.25
PTPN7-205ENST00000464870 COL18A1P39060 1754 aa16.6■□□□□ 0.25
PTPN7-205ENST00000464870 PPM1GO15355 546 aaPredicted RBP16.6■□□□□ 0.25
PTPN7-205ENST00000464870 KIF24Q5T7B8 1368 aa16.6■□□□□ 0.25
PTPN7-205ENST00000464870 CDCA7Q9BWT1 371 aaPredicted RBP16.59■□□□□ 0.25
PTPN7-205ENST00000464870 MRS2Q9HD23 443 aa16.59■□□□□ 0.25
PTPN7-205ENST00000464870 EMILIN1Q9Y6C2 1016 aa16.59■□□□□ 0.25
PTPN7-205ENST00000464870 MTHFSP49914 203 aa16.58■□□□□ 0.24
PTPN7-205ENST00000464870 PDE3BQ13370 1112 aa16.58■□□□□ 0.24
PTPN7-205ENST00000464870 FLT4P35916 1363 aa16.58■□□□□ 0.24
PTPN7-205ENST00000464870 UPF1Q92900 1129 aaKnown RBP eCLIP16.57■□□□□ 0.24
PTPN7-205ENST00000464870 POLKQ9UBT6 870 aa16.57■□□□□ 0.24
PTPN7-205ENST00000464870 INSRP06213 1382 aa16.56■□□□□ 0.24
PTPN7-205ENST00000464870 HSP90AB2PQ58FF8 381 aa16.56■□□□□ 0.24
PTPN7-205ENST00000464870 SMG6Q86US8 1419 aaKnown RBP16.55■□□□□ 0.24
PTPN7-205ENST00000464870 DDB1Q16531 1140 aa16.55■□□□□ 0.24
PTPN7-205ENST00000464870 LTN1O94822 1766 aa16.54■□□□□ 0.24
PTPN7-205ENST00000464870 EXOC5O00471 708 aa16.53■□□□□ 0.24
PTPN7-205ENST00000464870 IL2RBP14784 551 aa16.53■□□□□ 0.24
PTPN7-205ENST00000464870 CCDC125Q86Z20 511 aa16.52■□□□□ 0.24
PTPN7-205ENST00000464870 THSD7AQ9UPZ6 1657 aa16.52■□□□□ 0.23
PTPN7-205ENST00000464870 FAM182BQ5T319 152 aa16.51■□□□□ 0.23
PTPN7-205ENST00000464870 NBPF6Q5VWK0 638 aa16.51■□□□□ 0.23
PTPN7-205ENST00000464870 FAM196AQ6ZSG2 479 aa16.51■□□□□ 0.23
PTPN7-205ENST00000464870 NBPF4Q96M43 638 aa16.51■□□□□ 0.23
PTPN7-205ENST00000464870 MAP2P11137 1827 aaKnown RBP16.51■□□□□ 0.23
PTPN7-205ENST00000464870 FAM9BQ8IZU0 186 aa16.5■□□□□ 0.23
PTPN7-205ENST00000464870 PNISRQ8TF01 805 aaKnown RBP16.5■□□□□ 0.23
PTPN7-205ENST00000464870 RGPD5Q99666 1765 aa16.5■□□□□ 0.23
PTPN7-205ENST00000464870 DISP2A7MBM2 1401 aa16.49■□□□□ 0.23
PTPN7-205ENST00000464870 SF3B2Q13435 895 aaKnown RBP16.49■□□□□ 0.23
PTPN7-205ENST00000464870 CFAP53Q96M91 514 aa16.49■□□□□ 0.23
PTPN7-205ENST00000464870 USHBP1Q8N6Y0 703 aa16.48■□□□□ 0.23
PTPN7-205ENST00000464870 RAPGEF4Q8WZA2 1011 aa16.48■□□□□ 0.23
PTPN7-205ENST00000464870 EIF4A2Q14240 407 aaKnown RBP16.47■□□□□ 0.23
PTPN7-205ENST00000464870 PEAK1Q9H792 1746 aa16.47■□□□□ 0.23
PTPN7-205ENST00000464870 EYA1Q99502 592 aa16.46■□□□□ 0.23
PTPN7-205ENST00000464870 DIAPH1O60610 1272 aaKnown RBP16.45■□□□□ 0.22
PTPN7-205ENST00000464870 TATP17735 454 aaPredicted RBP16.45■□□□□ 0.22
PTPN7-205ENST00000464870 MARCH10Q8NA82 808 aaPredicted RBP16.45■□□□□ 0.22
PTPN7-205ENST00000464870 COL3A1P02461 1466 aaPredicted RBP16.45■□□□□ 0.22
PTPN7-205ENST00000464870 BRWD3Q6RI45 1802 aa16.45■□□□□ 0.22
PTPN7-205ENST00000464870 OVOS2A0A0G2JMS6 1433 aa16.44■□□□□ 0.22
PTPN7-205ENST00000464870 TNS2Q63HR2 1409 aa16.44■□□□□ 0.22
PTPN7-205ENST00000464870 FAM208AQ9UK61 1670 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms