RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 GOLGA2Q08379 1002 aa14.39□□□□□ -0.11
APP-213ENST00000464867 MKRN3Q13064 507 aaKnown RBP14.39□□□□□ -0.11
APP-213ENST00000464867 SPATA31A5Q5VU36 1347 aa14.39□□□□□ -0.11
APP-213ENST00000464867 SPATA31A7Q8IWB4 1347 aa14.39□□□□□ -0.11
APP-213ENST00000464867 NRAPQ86VF7 1730 aa14.38□□□□□ -0.11
APP-213ENST00000464867 RREB1Q92766 1687 aa14.37□□□□□ -0.11
APP-213ENST00000464867 CABP2Q9NPB3 220 aa14.37□□□□□ -0.11
APP-213ENST00000464867 PHF8Q9UPP1 1060 aa14.37□□□□□ -0.11
APP-213ENST00000464867 NUP188Q5SRE5 1749 aa14.37□□□□□ -0.11
APP-213ENST00000464867 ABCA3Q99758 1704 aa14.37□□□□□ -0.11
APP-213ENST00000464867 SBNO1A3KN83 1393 aa14.36□□□□□ -0.11
APP-213ENST00000464867 STK26Q9P289 416 aa14.36□□□□□ -0.11
APP-213ENST00000464867 COL14A1Q05707 1796 aaKnown RBP14.36□□□□□ -0.11
APP-213ENST00000464867 RPGRIP1LQ68CZ1 1315 aa14.36□□□□□ -0.11
APP-213ENST00000464867 CLTCL1P53675 1640 aa14.35□□□□□ -0.11
APP-213ENST00000464867 PDE3BQ13370 1112 aa14.35□□□□□ -0.11
APP-213ENST00000464867 WAPLQ7Z5K2 1190 aa14.35□□□□□ -0.11
APP-213ENST00000464867 THSD7AQ9UPZ6 1657 aa14.35□□□□□ -0.11
APP-213ENST00000464867 FMN2Q9NZ56 1722 aa14.35□□□□□ -0.11
APP-213ENST00000464867 GIGYF1O75420 1035 aaPredicted RBP14.34□□□□□ -0.11
APP-213ENST00000464867 ROCK1Q13464 1354 aa14.34□□□□□ -0.11
APP-213ENST00000464867 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.33□□□□□ -0.12
APP-213ENST00000464867 UTRNP46939 3433 aa14.33□□□□□ -0.12
APP-213ENST00000464867 RIOK3O14730 519 aaKnown RBP14.32□□□□□ -0.12
APP-213ENST00000464867 RGPD8O14715 1765 aaPredicted RBP14.32□□□□□ -0.12
APP-213ENST00000464867 RRBP1Q9P2E9 1410 aaKnown RBP14.32□□□□□ -0.12
APP-213ENST00000464867 CEP350Q5VT06 3117 aa14.3□□□□□ -0.12
APP-213ENST00000464867 LCE2DQ5TA82 110 aaPredicted RBP14.3□□□□□ -0.12
APP-213ENST00000464867 SPATA31A1Q5TZJ5 1347 aa14.3□□□□□ -0.12
APP-213ENST00000464867 PRDM11Q9NQV5 511 aa14.29□□□□□ -0.12
APP-213ENST00000464867 NRKQ7Z2Y5 1582 aa14.28□□□□□ -0.12
APP-213ENST00000464867 SLAIN1Q8ND83 568 aa14.28□□□□□ -0.12
APP-213ENST00000464867 NRXN1Q9ULB1 1477 aa14.28□□□□□ -0.12
APP-213ENST00000464867 PPLO60437 1756 aa14.27□□□□□ -0.12
APP-213ENST00000464867 TECPR2O15040 1411 aa14.27□□□□□ -0.12
APP-213ENST00000464867 C11orf95C9JLR9 678 aaPredicted RBP14.27□□□□□ -0.13
APP-213ENST00000464867 STRN4Q9NRL3 753 aa14.27□□□□□ -0.13
APP-213ENST00000464867 IFT172Q9UG01 1749 aa14.27□□□□□ -0.13
APP-213ENST00000464867 ABCC11Q96J66 1382 aa14.26□□□□□ -0.13
APP-213ENST00000464867 DPY19L2Q6NUT2 758 aa14.26□□□□□ -0.13
APP-213ENST00000464867 SYT17Q9BSW7 474 aa14.26□□□□□ -0.13
APP-213ENST00000464867 USP35Q9P2H5 1018 aa14.26□□□□□ -0.13
APP-213ENST00000464867 PLEKHH1Q9ULM0 1364 aa14.25□□□□□ -0.13
APP-213ENST00000464867 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.25□□□□□ -0.13
APP-213ENST00000464867 ZBTB7AO95365 584 aa14.25□□□□□ -0.13
APP-213ENST00000464867 EVA1CP58658 441 aa14.25□□□□□ -0.13
APP-213ENST00000464867 PMFBP1Q8TBY8 1022 aa14.25□□□□□ -0.13
APP-213ENST00000464867 FAM163AQ96GL9 167 aaPredicted RBP14.25□□□□□ -0.13
APP-213ENST00000464867 ZFP91Q96JP5 570 aaPredicted RBP14.25□□□□□ -0.13
APP-213ENST00000464867 FHDC1Q9C0D6 1143 aaPredicted RBP14.25□□□□□ -0.13
APP-213ENST00000464867 GPRASP1Q5JY77 1395 aa14.24□□□□□ -0.13
APP-213ENST00000464867 MYOM1P52179 1685 aa14.24□□□□□ -0.13
APP-213ENST00000464867 EFCAB3Q8N7B9 438 aa14.24□□□□□ -0.13
APP-213ENST00000464867 KNDC1Q76NI1 1749 aa14.24□□□□□ -0.13
APP-213ENST00000464867 ITGAEP38570 1179 aa14.23□□□□□ -0.13
APP-213ENST00000464867 BARGINQ6ZT62 677 aa14.23□□□□□ -0.13
APP-213ENST00000464867 BCL11BQ9C0K0 894 aaPredicted RBP14.23□□□□□ -0.13
APP-213ENST00000464867 CASZ1Q86V15 1759 aa14.22□□□□□ -0.13
APP-213ENST00000464867 POTEMA6NI47 508 aa14.22□□□□□ -0.13
APP-213ENST00000464867 TMEM132EQ6IEE7 984 aa14.22□□□□□ -0.13
APP-213ENST00000464867 LOC105371045A0A1W2PR82 267 aa14.21□□□□□ -0.13
APP-213ENST00000464867 PTGER2P43116 358 aa14.21□□□□□ -0.13
APP-213ENST00000464867 GPR162Q16538 588 aa14.21□□□□□ -0.13
APP-213ENST00000464867 SIRT1Q96EB6 747 aa14.21□□□□□ -0.13
APP-213ENST00000464867 DLC1Q96QB1 1528 aa14.2□□□□□ -0.14
APP-213ENST00000464867 PLSCR1O15162 318 aa14.2□□□□□ -0.14
APP-213ENST00000464867 POTEGQ6S5H5 508 aa14.2□□□□□ -0.14
APP-213ENST00000464867 RGPD3A6NKT7 1758 aaPredicted RBP14.19□□□□□ -0.14
APP-213ENST00000464867 RGPD4Q7Z3J3 1758 aa14.19□□□□□ -0.14
APP-213ENST00000464867 ADGRF5Q8IZF2 1346 aa14.19□□□□□ -0.14
APP-213ENST00000464867 ECM2O94769 699 aaPredicted RBP14.19□□□□□ -0.14
APP-213ENST00000464867 L3MBTL3Q96JM7 780 aaPredicted RBP14.19□□□□□ -0.14
APP-213ENST00000464867 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.19□□□□□ -0.14
APP-213ENST00000464867 ALS2Q96Q42 1657 aa14.19□□□□□ -0.14
APP-213ENST00000464867 TRPM3Q9HCF6 1732 aaPredicted RBP14.18□□□□□ -0.14
APP-213ENST00000464867 YTHDC2Q9H6S0 1430 aaKnown RBP14.18□□□□□ -0.14
APP-213ENST00000464867 CHRNA2Q15822 529 aa14.18□□□□□ -0.14
APP-213ENST00000464867 TCP11L2Q8N4U5 519 aa14.18□□□□□ -0.14
APP-213ENST00000464867 PDGFDQ9GZP0 370 aaPredicted RBP14.18□□□□□ -0.14
APP-213ENST00000464867 STK32BQ9NY57 414 aa14.18□□□□□ -0.14
APP-213ENST00000464867 KIAA0232Q92628 1395 aa14.18□□□□□ -0.14
APP-213ENST00000464867 ANKARQ7Z5J8 1434 aa14.17□□□□□ -0.14
APP-213ENST00000464867 MTFR1LQ9H019 292 aa14.17□□□□□ -0.14
APP-213ENST00000464867 ANO8Q9HCE9 1232 aaPredicted RBP14.17□□□□□ -0.14
APP-213ENST00000464867 SAFB2Q14151 953 aaKnown RBP eCLIP14.16□□□□□ -0.14
APP-213ENST00000464867 ARXQ96QS3 562 aa14.16□□□□□ -0.14
APP-213ENST00000464867 THRAP3Q9Y2W1 955 aaKnown RBP14.16□□□□□ -0.14
APP-213ENST00000464867 ACIN1Q9UKV3 1341 aaKnown RBP14.15□□□□□ -0.14
APP-213ENST00000464867 ANKRD30BQ9BXX2 1392 aa14.15□□□□□ -0.14
APP-213ENST00000464867 NGDNQ8NEJ9 315 aaKnown RBP14.15□□□□□ -0.14
APP-213ENST00000464867 POGKQ9P215 609 aa14.15□□□□□ -0.14
APP-213ENST00000464867 OVOS2A0A0G2JMS6 1433 aa14.15□□□□□ -0.14
APP-213ENST00000464867 OVOS2A0A0J9YW53 1432 aa14.15□□□□□ -0.14
APP-213ENST00000464867 OVOS2Q6IE36 1432 aa14.15□□□□□ -0.14
APP-213ENST00000464867 ZC3H6P61129 1189 aaKnown RBP14.14□□□□□ -0.15
APP-213ENST00000464867 RGL3Q3MIN7 710 aa14.14□□□□□ -0.15
APP-213ENST00000464867 C3orf67Q6ZVT6 689 aa14.14□□□□□ -0.15
APP-213ENST00000464867 CRYBG1Q9Y4K1 1723 aa14.14□□□□□ -0.15
APP-213ENST00000464867 SSH2Q76I76 1423 aa14.14□□□□□ -0.15
APP-213ENST00000464867 EIF3AQ14152 1382 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 216.8 ms