RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 RSPH6AQ9H0K4 717 aa20.43■□□□□ 0.86
GYPC-205ENST00000464053 RGPD1P0DJD0 1748 aa20.42■□□□□ 0.86
GYPC-205ENST00000464053 ZBTB7CA1YPR0 619 aa20.42■□□□□ 0.86
GYPC-205ENST00000464053 TCP11L2Q8N4U5 519 aa20.42■□□□□ 0.86
GYPC-205ENST00000464053 ARHGEF10O15013 1369 aa20.42■□□□□ 0.86
GYPC-205ENST00000464053 FCHSD2O94868 740 aa20.41■□□□□ 0.86
GYPC-205ENST00000464053 ARHGEF25Q86VW2 580 aa20.41■□□□□ 0.86
GYPC-205ENST00000464053 RTL1A6NKG5 1358 aa20.41■□□□□ 0.86
GYPC-205ENST00000464053 IP6K1Q92551 441 aa20.41■□□□□ 0.86
GYPC-205ENST00000464053 RRP7AQ9Y3A4 280 aaKnown RBP20.41■□□□□ 0.86
GYPC-205ENST00000464053 PRKAR2BP31323 418 aa20.39■□□□□ 0.86
GYPC-205ENST00000464053 ZNF521Q96K83 1311 aa20.39■□□□□ 0.85
GYPC-205ENST00000464053 ZC3H6P61129 1189 aaKnown RBP20.39■□□□□ 0.85
GYPC-205ENST00000464053 NEUROD2Q15784 382 aa20.39■□□□□ 0.85
GYPC-205ENST00000464053 AEBP1Q8IUX7 1158 aa20.39■□□□□ 0.85
GYPC-205ENST00000464053 CDCA7LQ96GN5 454 aa20.38■□□□□ 0.85
GYPC-205ENST00000464053 LTV1Q96GA3 475 aaPredicted RBP20.37■□□□□ 0.85
GYPC-205ENST00000464053 SULT6B1Q6IMI4 303 aa20.37■□□□□ 0.85
GYPC-205ENST00000464053 PHACTR3Q96KR7 559 aa20.37■□□□□ 0.85
GYPC-205ENST00000464053 AHDC1Q5TGY3 1603 aaPredicted RBP20.36■□□□□ 0.85
GYPC-205ENST00000464053 MAPK8IP3Q9UPT6 1336 aa20.36■□□□□ 0.85
GYPC-205ENST00000464053 EYA1Q99502 592 aa20.36■□□□□ 0.85
GYPC-205ENST00000464053 PNNQ9H307 717 aaKnown RBP20.36■□□□□ 0.85
GYPC-205ENST00000464053 RGPD5Q99666 1765 aa20.35■□□□□ 0.85
GYPC-205ENST00000464053 AXIN2Q9Y2T1 843 aa20.35■□□□□ 0.85
GYPC-205ENST00000464053 TOM1O60784 492 aa20.34■□□□□ 0.85
GYPC-205ENST00000464053 PDE3BQ13370 1112 aa20.34■□□□□ 0.85
GYPC-205ENST00000464053 TMPOP42166 694 aaKnown RBP20.34■□□□□ 0.85
GYPC-205ENST00000464053 PIP4K2BP78356 416 aa20.34■□□□□ 0.85
GYPC-205ENST00000464053 IGSF1Q8N6C5 1336 aa20.34■□□□□ 0.85
GYPC-205ENST00000464053 ABCA3Q99758 1704 aa20.34■□□□□ 0.85
GYPC-205ENST00000464053 WWC1Q8IX03 1113 aa20.33■□□□□ 0.85
GYPC-205ENST00000464053 NGEFQ8N5V2 710 aa20.33■□□□□ 0.85
GYPC-205ENST00000464053 PHF23Q9BUL5 403 aaPredicted RBP20.33■□□□□ 0.85
GYPC-205ENST00000464053 RGPD2P0DJD1 1756 aa20.33■□□□□ 0.84
GYPC-205ENST00000464053 COL18A1P39060 1754 aa20.32■□□□□ 0.84
GYPC-205ENST00000464053 UBAP1LF5GYI3 381 aa20.31■□□□□ 0.84
GYPC-205ENST00000464053 KIAA0232Q92628 1395 aa20.31■□□□□ 0.84
GYPC-205ENST00000464053 PHLPP1O60346 1717 aa20.3■□□□□ 0.84
GYPC-205ENST00000464053 KDRP35968 1356 aa20.3■□□□□ 0.84
GYPC-205ENST00000464053 LRRC59Q96AG4 307 aaKnown RBP20.3■□□□□ 0.84
GYPC-205ENST00000464053 SPINK5Q9NQ38 1064 aaPredicted RBP20.3■□□□□ 0.84
GYPC-205ENST00000464053 CPDO75976 1380 aa20.3■□□□□ 0.84
GYPC-205ENST00000464053 RIPK4P57078 832 aa20.3■□□□□ 0.84
GYPC-205ENST00000464053 GOLGA2Q08379 1002 aa20.3■□□□□ 0.84
GYPC-205ENST00000464053 CHRNA2Q15822 529 aa20.3■□□□□ 0.84
GYPC-205ENST00000464053 CCDC27Q2M243 656 aa20.3■□□□□ 0.84
GYPC-205ENST00000464053 NBPF6Q5VWK0 638 aa20.3■□□□□ 0.84
GYPC-205ENST00000464053 NBPF4Q96M43 638 aa20.3■□□□□ 0.84
GYPC-205ENST00000464053 TRIM35Q9UPQ4 493 aa20.3■□□□□ 0.84
GYPC-205ENST00000464053 NEFMP07197 916 aa20.29■□□□□ 0.84
GYPC-205ENST00000464053 NCBP3Q53F19 620 aaKnown RBP20.29■□□□□ 0.84
GYPC-205ENST00000464053 USHBP1Q8N6Y0 703 aa20.29■□□□□ 0.84
GYPC-205ENST00000464053 ANKRD24Q8TF21 1146 aa20.29■□□□□ 0.84
GYPC-205ENST00000464053 CERKQ8TCT0 537 aa20.28■□□□□ 0.84
GYPC-205ENST00000464053 COL16A1Q07092 1604 aaPredicted RBP20.28■□□□□ 0.84
GYPC-205ENST00000464053 NFE2L2Q16236 605 aa20.27■□□□□ 0.84
GYPC-205ENST00000464053 DLG5Q8TDM6 1919 aa20.27■□□□□ 0.84
GYPC-205ENST00000464053 HAP1P54257 671 aaPredicted RBP20.27■□□□□ 0.84
GYPC-205ENST00000464053 SLFN5Q08AF3 891 aa20.27■□□□□ 0.84
GYPC-205ENST00000464053 ERBB3P21860 1342 aa20.25■□□□□ 0.83
GYPC-205ENST00000464053 DUSP27Q5VZP5 1158 aa20.25■□□□□ 0.83
GYPC-205ENST00000464053 COL22A1Q8NFW1 1626 aaPredicted RBP20.24■□□□□ 0.83
GYPC-205ENST00000464053 WDR63Q8IWG1 891 aa20.24■□□□□ 0.83
GYPC-205ENST00000464053 TRMT2AQ8IZ69 625 aaKnown RBP20.24■□□□□ 0.83
GYPC-205ENST00000464053 PRDM11Q9NQV5 511 aa20.24■□□□□ 0.83
GYPC-205ENST00000464053 ABCC6O95255 1503 aa20.24■□□□□ 0.83
GYPC-205ENST00000464053 SUPT16HQ9Y5B9 1047 aaKnown RBP20.23■□□□□ 0.83
GYPC-205ENST00000464053 GTF3C3Q9Y5Q9 886 aa20.23■□□□□ 0.83
GYPC-205ENST00000464053 CAMTA1Q9Y6Y1 1673 aa20.23■□□□□ 0.83
GYPC-205ENST00000464053 LMO7Q8WWI1 1683 aa20.22■□□□□ 0.83
GYPC-205ENST00000464053 E9PSI1 815 aa20.22■□□□□ 0.83
GYPC-205ENST00000464053 NCAPD2Q15021 1401 aa20.21■□□□□ 0.83
GYPC-205ENST00000464053 MTHFSDQ2M296 383 aaKnown RBP20.2■□□□□ 0.82
GYPC-205ENST00000464053 FAM83GA6ND36 823 aa20.19■□□□□ 0.82
GYPC-205ENST00000464053 THUMPD2Q9BTF0 503 aaKnown RBP20.19■□□□□ 0.82
GYPC-205ENST00000464053 CSB-PGBD3P0DP91 1061 aa20.17■□□□□ 0.82
GYPC-205ENST00000464053 NLRP2Q9NX02 1062 aa20.17■□□□□ 0.82
GYPC-205ENST00000464053 FAM208AQ9UK61 1670 aaKnown RBP20.17■□□□□ 0.82
GYPC-205ENST00000464053 DCTN1Q14203 1278 aa20.16■□□□□ 0.82
GYPC-205ENST00000464053 COL5A2P05997 1499 aaPredicted RBP20.15■□□□□ 0.82
GYPC-205ENST00000464053 LMOD3Q0VAK6 560 aa20.14■□□□□ 0.81
GYPC-205ENST00000464053 GAS2L2Q8NHY3 880 aa20.14■□□□□ 0.81
GYPC-205ENST00000464053 RCAN3Q9UKA8 241 aa20.14■□□□□ 0.81
GYPC-205ENST00000464053 IL16Q14005 1332 aa20.14■□□□□ 0.81
GYPC-205ENST00000464053 TSR2Q969E8 191 aaKnown RBP20.13■□□□□ 0.81
GYPC-205ENST00000464053 MCM10Q7L590 875 aa20.13■□□□□ 0.81
GYPC-205ENST00000464053 WDR17Q8IZU2 1322 aa20.12■□□□□ 0.81
GYPC-205ENST00000464053 MYH16Q9H6N6 1097 aa20.12■□□□□ 0.81
GYPC-205ENST00000464053 COL14A1Q05707 1796 aaKnown RBP20.12■□□□□ 0.81
GYPC-205ENST00000464053 FANCIQ9NVI1 1328 aa20.11■□□□□ 0.81
GYPC-205ENST00000464053 STRN4Q9NRL3 753 aa20.11■□□□□ 0.81
GYPC-205ENST00000464053 BTG4Q9NY30 223 aa20.1■□□□□ 0.81
GYPC-205ENST00000464053 LAS1LQ9Y4W2 734 aaKnown RBP20.1■□□□□ 0.81
GYPC-205ENST00000464053 NUTM2BA6NNL0 878 aaPredicted RBP20.09■□□□□ 0.81
GYPC-205ENST00000464053 NUTM2EB1AL46 878 aaPredicted RBP20.09■□□□□ 0.81
GYPC-205ENST00000464053 ADAMTS2O95450 1211 aa20.09■□□□□ 0.81
GYPC-205ENST00000464053 TOM1L2Q6ZVM7 507 aa20.09■□□□□ 0.81
GYPC-205ENST00000464053 NUTM2AQ8IVF1 878 aaPredicted RBP20.09■□□□□ 0.81
GYPC-205ENST00000464053 RNF123Q5XPI4 1314 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms