RNA–Protein interactions for RNA: ENST00000463943.1

BCAS4-204, Transcript of breast carcinoma amplified sequence 4, humanhuman

TSL 1 (best)

Gene BCAS4, Length 1,498 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4-204ENST00000463943 COL5A2P05997 1499 aaPredicted RBP26.7■■□□□ 1.86
BCAS4-204ENST00000463943 GLI3P10071 1580 aa26.7■■□□□ 1.86
BCAS4-204ENST00000463943 RGPD5Q99666 1765 aa26.69■■□□□ 1.86
BCAS4-204ENST00000463943 EVA1CP58658 441 aa26.69■■□□□ 1.86
BCAS4-204ENST00000463943 RRS1Q15050 365 aaKnown RBP26.68■■□□□ 1.86
BCAS4-204ENST00000463943 ANKRD26Q9UPS8 1709 aa26.67■■□□□ 1.86
BCAS4-204ENST00000463943 PER1O15534 1290 aaPredicted RBP26.67■■□□□ 1.86
BCAS4-204ENST00000463943 MAP3K19Q56UN5 1328 aa26.66■■□□□ 1.86
BCAS4-204ENST00000463943 LARP1Q6PKG0 1096 aaKnown RBP26.66■■□□□ 1.86
BCAS4-204ENST00000463943 RGS12O14924 1447 aa26.64■■□□□ 1.86
BCAS4-204ENST00000463943 ABCC6O95255 1503 aa26.64■■□□□ 1.85
BCAS4-204ENST00000463943 NSD2O96028 1365 aa26.64■■□□□ 1.85
BCAS4-204ENST00000463943 SPATA31A5Q5VU36 1347 aa26.63■■□□□ 1.85
BCAS4-204ENST00000463943 SPATA31A7Q8IWB4 1347 aa26.63■■□□□ 1.85
BCAS4-204ENST00000463943 AMER1Q5JTC6 1135 aaPredicted RBP26.63■■□□□ 1.85
BCAS4-204ENST00000463943 USP35Q9P2H5 1018 aa26.63■■□□□ 1.85
BCAS4-204ENST00000463943 TNNT2P45379 298 aaPredicted RBP26.62■■□□□ 1.85
BCAS4-204ENST00000463943 CDK12Q9NYV4 1490 aaPredicted RBP26.62■■□□□ 1.85
BCAS4-204ENST00000463943 SPATA31A1Q5TZJ5 1347 aa26.61■■□□□ 1.85
BCAS4-204ENST00000463943 AMPHP49418 695 aa26.61■■□□□ 1.85
BCAS4-204ENST00000463943 HOXC9P31274 260 aa26.6■■□□□ 1.85
BCAS4-204ENST00000463943 IP6K1Q92551 441 aa26.6■■□□□ 1.85
BCAS4-204ENST00000463943 WDR17Q8IZU2 1322 aa26.59■■□□□ 1.85
BCAS4-204ENST00000463943 CNGB1Q14028 1251 aaPredicted RBP26.59■■□□□ 1.85
BCAS4-204ENST00000463943 FAM98CQ17RN3 349 aaKnown RBP26.59■■□□□ 1.85
BCAS4-204ENST00000463943 EMILIN1Q9Y6C2 1016 aa26.59■■□□□ 1.85
BCAS4-204ENST00000463943 CRB1P82279 1406 aa26.58■■□□□ 1.85
BCAS4-204ENST00000463943 CSB-PGBD3P0DP91 1061 aa26.58■■□□□ 1.85
BCAS4-204ENST00000463943 CC2D1BQ5T0F9 858 aaKnown RBP26.58■■□□□ 1.85
BCAS4-204ENST00000463943 TOM1L2Q6ZVM7 507 aa26.58■■□□□ 1.85
BCAS4-204ENST00000463943 MORC1Q86VD1 984 aa26.58■■□□□ 1.85
BCAS4-204ENST00000463943 PEAK1Q9H792 1746 aa26.58■■□□□ 1.85
BCAS4-204ENST00000463943 ERBB3P21860 1342 aa26.58■■□□□ 1.84
BCAS4-204ENST00000463943 BLMP54132 1417 aaPredicted RBP26.57■■□□□ 1.84
BCAS4-204ENST00000463943 MAP2P11137 1827 aaKnown RBP26.57■■□□□ 1.84
BCAS4-204ENST00000463943 ANKRD24Q8TF21 1146 aa26.56■■□□□ 1.84
BCAS4-204ENST00000463943 RTL1A6NKG5 1358 aa26.56■■□□□ 1.84
BCAS4-204ENST00000463943 A0A0G2JS52 829 aa26.55■■□□□ 1.84
BCAS4-204ENST00000463943 PPM1GO15355 546 aaPredicted RBP26.55■■□□□ 1.84
BCAS4-204ENST00000463943 MYT1Q01538 1121 aa26.55■■□□□ 1.84
BCAS4-204ENST00000463943 LTV1Q96GA3 475 aaPredicted RBP26.55■■□□□ 1.84
BCAS4-204ENST00000463943 EP400Q96L91 3159 aa26.53■■□□□ 1.84
BCAS4-204ENST00000463943 ONECUT3O60422 494 aaPredicted RBP26.53■■□□□ 1.84
BCAS4-204ENST00000463943 SEPT12Q8IYM1 358 aa26.53■■□□□ 1.84
BCAS4-204ENST00000463943 TCP11L2Q8N4U5 519 aa26.53■■□□□ 1.84
BCAS4-204ENST00000463943 POLKQ9UBT6 870 aa26.53■■□□□ 1.84
BCAS4-204ENST00000463943 FLT4P35916 1363 aa26.52■■□□□ 1.84
BCAS4-204ENST00000463943 HSP90AB2PQ58FF8 381 aa26.52■■□□□ 1.84
BCAS4-204ENST00000463943 DDX10Q13206 875 aaKnown RBP26.5■■□□□ 1.83
BCAS4-204ENST00000463943 KIF24Q5T7B8 1368 aa26.5■■□□□ 1.83
BCAS4-204ENST00000463943 NPC1L1Q9UHC9 1359 aa26.5■■□□□ 1.83
BCAS4-204ENST00000463943 THSD7AQ9UPZ6 1657 aa26.5■■□□□ 1.83
BCAS4-204ENST00000463943 NLRP2Q9NX02 1062 aa26.49■■□□□ 1.83
BCAS4-204ENST00000463943 THRAP3Q9Y2W1 955 aaKnown RBP26.49■■□□□ 1.83
BCAS4-204ENST00000463943 BRWD3Q6RI45 1802 aa26.49■■□□□ 1.83
BCAS4-204ENST00000463943 BARGINQ6ZT62 677 aa26.49■■□□□ 1.83
BCAS4-204ENST00000463943 CARD10Q9BWT7 1032 aa26.49■■□□□ 1.83
BCAS4-204ENST00000463943 INSRP06213 1382 aa26.48■■□□□ 1.83
BCAS4-204ENST00000463943 FAM208AQ9UK61 1670 aaKnown RBP26.46■■□□□ 1.83
BCAS4-204ENST00000463943 RGPD2P0DJD1 1756 aa26.46■■□□□ 1.83
BCAS4-204ENST00000463943 SMG6Q86US8 1419 aaKnown RBP26.44■■□□□ 1.82
BCAS4-204ENST00000463943 WNK3Q9BYP7 1800 aa26.44■■□□□ 1.82
BCAS4-204ENST00000463943 ZNF316A6NFI3 1004 aaPredicted RBP26.42■■□□□ 1.82
BCAS4-204ENST00000463943 SOCS7O14512 581 aa26.42■■□□□ 1.82
BCAS4-204ENST00000463943 NBPF6Q5VWK0 638 aa26.41■■□□□ 1.82
BCAS4-204ENST00000463943 KRT27Q7Z3Y8 459 aa26.41■■□□□ 1.82
BCAS4-204ENST00000463943 NBPF4Q96M43 638 aa26.41■■□□□ 1.82
BCAS4-204ENST00000463943 PARP4Q9UKK3 1724 aaKnown RBP26.4■■□□□ 1.82
BCAS4-204ENST00000463943 USHBP1Q8N6Y0 703 aa26.39■■□□□ 1.82
BCAS4-204ENST00000463943 DISP2A7MBM2 1401 aa26.39■■□□□ 1.81
BCAS4-204ENST00000463943 LRRC37A3O60309 1634 aa26.38■■□□□ 1.81
BCAS4-204ENST00000463943 FAM182BQ5T319 152 aa26.38■■□□□ 1.81
BCAS4-204ENST00000463943 MTHFSP49914 203 aa26.37■■□□□ 1.81
BCAS4-204ENST00000463943 EIF4A2Q14240 407 aaKnown RBP26.36■■□□□ 1.81
BCAS4-204ENST00000463943 IL2RBP14784 551 aa26.36■■□□□ 1.81
BCAS4-204ENST00000463943 DDB1Q16531 1140 aa26.35■■□□□ 1.81
BCAS4-204ENST00000463943 CDCA7Q9BWT1 371 aaPredicted RBP26.35■■□□□ 1.81
BCAS4-204ENST00000463943 PDE3BQ13370 1112 aa26.34■■□□□ 1.81
BCAS4-204ENST00000463943 EYA1Q99502 592 aa26.32■■□□□ 1.8
BCAS4-204ENST00000463943 MEGF6O75095 1541 aa26.3■■□□□ 1.8
BCAS4-204ENST00000463943 EXOC5O00471 708 aa26.3■■□□□ 1.8
BCAS4-204ENST00000463943 UPF1Q92900 1129 aaKnown RBP eCLIP26.3■■□□□ 1.8
BCAS4-204ENST00000463943 PARD3Q8TEW0 1356 aa26.29■■□□□ 1.8
BCAS4-204ENST00000463943 TNS2Q63HR2 1409 aa26.29■■□□□ 1.8
BCAS4-204ENST00000463943 PPP2R1AP30153 589 aa26.29■■□□□ 1.8
BCAS4-204ENST00000463943 NCAPD2Q15021 1401 aa26.27■■□□□ 1.8
BCAS4-204ENST00000463943 IL13P35225 146 aa26.26■■□□□ 1.79
BCAS4-204ENST00000463943 MARCH10Q8NA82 808 aaPredicted RBP26.25■■□□□ 1.79
BCAS4-204ENST00000463943 RAPGEF4Q8WZA2 1011 aa26.25■■□□□ 1.79
BCAS4-204ENST00000463943 IGSF1Q8N6C5 1336 aa26.25■■□□□ 1.79
BCAS4-204ENST00000463943 OVOS2A0A0G2JMS6 1433 aa26.23■■□□□ 1.79
BCAS4-204ENST00000463943 COL3A1P02461 1466 aaPredicted RBP26.23■■□□□ 1.79
BCAS4-204ENST00000463943 TATP17735 454 aaPredicted RBP26.23■■□□□ 1.79
BCAS4-204ENST00000463943 RGPD1P0DJD0 1748 aa26.22■■□□□ 1.79
BCAS4-204ENST00000463943 DIAPH1O60610 1272 aaKnown RBP26.22■■□□□ 1.79
BCAS4-204ENST00000463943 FAM196AQ6ZSG2 479 aa26.22■■□□□ 1.79
BCAS4-204ENST00000463943 ZCRB1Q8TBF4 217 aaKnown RBP26.2■■□□□ 1.78
BCAS4-204ENST00000463943 SHANK3Q9BYB0 1731 aa26.2■■□□□ 1.78
BCAS4-204ENST00000463943 RALBP1Q15311 655 aa26.19■■□□□ 1.78
BCAS4-204ENST00000463943 AEBP1Q8IUX7 1158 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms