RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 COG3Q96JB2 828 aa26.16■■□□□ 1.78
COL9A3-203ENST00000462700 POLR3GLQ9BT43 218 aa26.16■■□□□ 1.78
COL9A3-203ENST00000462700 THSD7AQ9UPZ6 1657 aa26.15■■□□□ 1.78
COL9A3-203ENST00000462700 USP35Q9P2H5 1018 aa26.14■■□□□ 1.78
COL9A3-203ENST00000462700 BRWD3Q6RI45 1802 aa26.14■■□□□ 1.77
COL9A3-203ENST00000462700 CRB1P82279 1406 aa26.14■■□□□ 1.77
COL9A3-203ENST00000462700 FYB1O15117 783 aa26.13■■□□□ 1.77
COL9A3-203ENST00000462700 CARD14Q9BXL6 1004 aa26.13■■□□□ 1.77
COL9A3-203ENST00000462700 NSD3Q9BZ95 1437 aa26.13■■□□□ 1.77
COL9A3-203ENST00000462700 KRT27Q7Z3Y8 459 aa26.12■■□□□ 1.77
COL9A3-203ENST00000462700 BARGINQ6ZT62 677 aa26.11■■□□□ 1.77
COL9A3-203ENST00000462700 TCP11L2Q8N4U5 519 aa26.11■■□□□ 1.77
COL9A3-203ENST00000462700 GGNBP2Q9H3C7 697 aa26.11■■□□□ 1.77
COL9A3-203ENST00000462700 WDR17Q8IZU2 1322 aa26.11■■□□□ 1.77
COL9A3-203ENST00000462700 C11orf95C9JLR9 678 aaPredicted RBP26.1■■□□□ 1.77
COL9A3-203ENST00000462700 THRAP3Q9Y2W1 955 aaKnown RBP26.1■■□□□ 1.77
COL9A3-203ENST00000462700 EP400Q96L91 3159 aa26.08■■□□□ 1.77
COL9A3-203ENST00000462700 LTN1O94822 1766 aa26.08■■□□□ 1.77
COL9A3-203ENST00000462700 TOM1L2Q6ZVM7 507 aa26.08■■□□□ 1.77
COL9A3-203ENST00000462700 KIF20BQ96Q89 1820 aa26.07■■□□□ 1.76
COL9A3-203ENST00000462700 RGPD5Q99666 1765 aa26.06■■□□□ 1.76
COL9A3-203ENST00000462700 CSB-PGBD3P0DP91 1061 aa26.05■■□□□ 1.76
COL9A3-203ENST00000462700 ERBB3P21860 1342 aa26.04■■□□□ 1.76
COL9A3-203ENST00000462700 FBLN1P23142 703 aa26.03■■□□□ 1.76
COL9A3-203ENST00000462700 MAP3K19Q56UN5 1328 aa26.03■■□□□ 1.76
COL9A3-203ENST00000462700 BLMP54132 1417 aaPredicted RBP26.03■■□□□ 1.76
COL9A3-203ENST00000462700 IP6K1Q92551 441 aa26.02■■□□□ 1.76
COL9A3-203ENST00000462700 CARD10Q9BWT7 1032 aa26.02■■□□□ 1.76
COL9A3-203ENST00000462700 CGNL1Q0VF96 1302 aa26.02■■□□□ 1.76
COL9A3-203ENST00000462700 KIF7Q2M1P5 1343 aa26.02■■□□□ 1.76
COL9A3-203ENST00000462700 CCDC125Q86Z20 511 aa26.01■■□□□ 1.75
COL9A3-203ENST00000462700 PANK3Q9H999 370 aa26.01■■□□□ 1.75
COL9A3-203ENST00000462700 ANKRD24Q8TF21 1146 aa25.99■■□□□ 1.75
COL9A3-203ENST00000462700 PARP4Q9UKK3 1724 aaKnown RBP25.99■■□□□ 1.75
COL9A3-203ENST00000462700 CCDC7Q96M83 1385 aa25.98■■□□□ 1.75
COL9A3-203ENST00000462700 HOXC9P31274 260 aa25.98■■□□□ 1.75
COL9A3-203ENST00000462700 AMPHP49418 695 aa25.98■■□□□ 1.75
COL9A3-203ENST00000462700 RRS1Q15050 365 aaKnown RBP25.98■■□□□ 1.75
COL9A3-203ENST00000462700 FAM182BQ5T319 152 aa25.98■■□□□ 1.75
COL9A3-203ENST00000462700 RTL1A6NKG5 1358 aa25.97■■□□□ 1.75
COL9A3-203ENST00000462700 PDE3BQ13370 1112 aa25.96■■□□□ 1.75
COL9A3-203ENST00000462700 WNK3Q9BYP7 1800 aa25.95■■□□□ 1.75
COL9A3-203ENST00000462700 NLRP2Q9NX02 1062 aa25.95■■□□□ 1.74
COL9A3-203ENST00000462700 DISP2A7MBM2 1401 aa25.95■■□□□ 1.74
COL9A3-203ENST00000462700 CDCA7Q9BWT1 371 aaPredicted RBP25.94■■□□□ 1.74
COL9A3-203ENST00000462700 LRRC37A3O60309 1634 aa25.94■■□□□ 1.74
COL9A3-203ENST00000462700 LTV1Q96GA3 475 aaPredicted RBP25.92■■□□□ 1.74
COL9A3-203ENST00000462700 DDB1Q16531 1140 aa25.91■■□□□ 1.74
COL9A3-203ENST00000462700 FAM196AQ6ZSG2 479 aa25.91■■□□□ 1.74
COL9A3-203ENST00000462700 KIF24Q5T7B8 1368 aa25.91■■□□□ 1.74
COL9A3-203ENST00000462700 SF3B2Q13435 895 aaKnown RBP25.9■■□□□ 1.74
COL9A3-203ENST00000462700 NSD2O96028 1365 aa25.9■■□□□ 1.74
COL9A3-203ENST00000462700 FAM208AQ9UK61 1670 aaKnown RBP25.9■■□□□ 1.74
COL9A3-203ENST00000462700 PEAK1Q9H792 1746 aa25.89■■□□□ 1.74
COL9A3-203ENST00000462700 ANKRD26Q9UPS8 1709 aa25.89■■□□□ 1.74
COL9A3-203ENST00000462700 FLT4P35916 1363 aa25.89■■□□□ 1.74
COL9A3-203ENST00000462700 EMILIN1Q9Y6C2 1016 aa25.88■■□□□ 1.73
COL9A3-203ENST00000462700 WASHC2AQ641Q2 1341 aa25.88■■□□□ 1.73
COL9A3-203ENST00000462700 INSRP06213 1382 aa25.86■■□□□ 1.73
COL9A3-203ENST00000462700 KNSTRNQ9Y448 316 aa25.86■■□□□ 1.73
COL9A3-203ENST00000462700 IL2RBP14784 551 aa25.85■■□□□ 1.73
COL9A3-203ENST00000462700 HSP90AB2PQ58FF8 381 aa25.85■■□□□ 1.73
COL9A3-203ENST00000462700 DEFB132Q7Z7B7 95 aa25.85■■□□□ 1.73
COL9A3-203ENST00000462700 OVOS2A0A0G2JMS6 1433 aa25.85■■□□□ 1.73
COL9A3-203ENST00000462700 TNS2Q63HR2 1409 aa25.85■■□□□ 1.73
COL9A3-203ENST00000462700 SMG6Q86US8 1419 aaKnown RBP25.85■■□□□ 1.73
COL9A3-203ENST00000462700 RGPD1P0DJD0 1748 aa25.85■■□□□ 1.73
COL9A3-203ENST00000462700 EXOC5O00471 708 aa25.83■■□□□ 1.73
COL9A3-203ENST00000462700 TRIM37O94972 964 aa25.82■■□□□ 1.72
COL9A3-203ENST00000462700 TNNT2P45379 298 aaPredicted RBP25.82■■□□□ 1.72
COL9A3-203ENST00000462700 MARCH10Q8NA82 808 aaPredicted RBP25.82■■□□□ 1.72
COL9A3-203ENST00000462700 TNS1Q9HBL0 1735 aaKnown RBP25.81■■□□□ 1.72
COL9A3-203ENST00000462700 PPM1GO15355 546 aaPredicted RBP25.81■■□□□ 1.72
COL9A3-203ENST00000462700 BAG6P46379 1132 aa25.81■■□□□ 1.72
COL9A3-203ENST00000462700 POLKQ9UBT6 870 aa25.81■■□□□ 1.72
COL9A3-203ENST00000462700 AMER1Q5JTC6 1135 aaPredicted RBP25.8■■□□□ 1.72
COL9A3-203ENST00000462700 PER1O15534 1290 aaPredicted RBP25.79■■□□□ 1.72
COL9A3-203ENST00000462700 NBPF6Q5VWK0 638 aa25.79■■□□□ 1.72
COL9A3-203ENST00000462700 NBPF4Q96M43 638 aa25.79■■□□□ 1.72
COL9A3-203ENST00000462700 RGPD2P0DJD1 1756 aa25.78■■□□□ 1.72
COL9A3-203ENST00000462700 MORC1Q86VD1 984 aa25.78■■□□□ 1.72
COL9A3-203ENST00000462700 BCL9O00512 1426 aa25.78■■□□□ 1.72
COL9A3-203ENST00000462700 MAP2P11137 1827 aaKnown RBP25.76■■□□□ 1.71
COL9A3-203ENST00000462700 USHBP1Q8N6Y0 703 aa25.75■■□□□ 1.71
COL9A3-203ENST00000462700 MEGF6O75095 1541 aa25.74■■□□□ 1.71
COL9A3-203ENST00000462700 EN1Q05925 392 aaPredicted RBP25.74■■□□□ 1.71
COL9A3-203ENST00000462700 APBA3O96018 575 aa25.73■■□□□ 1.71
COL9A3-203ENST00000462700 NCAPD2Q15021 1401 aa25.7■■□□□ 1.7
COL9A3-203ENST00000462700 RAPGEF4Q8WZA2 1011 aa25.69■■□□□ 1.7
COL9A3-203ENST00000462700 SBF2Q86WG5 1849 aa25.69■■□□□ 1.7
COL9A3-203ENST00000462700 NPC1L1Q9UHC9 1359 aa25.69■■□□□ 1.7
COL9A3-203ENST00000462700 EIF4A2Q14240 407 aaKnown RBP25.68■■□□□ 1.7
COL9A3-203ENST00000462700 EZH2Q15910 746 aaKnown RBP25.68■■□□□ 1.7
COL9A3-203ENST00000462700 CC2D1BQ5T0F9 858 aaKnown RBP25.68■■□□□ 1.7
COL9A3-203ENST00000462700 CAMKK2Q96RR4 588 aa25.68■■□□□ 1.7
COL9A3-203ENST00000462700 BCL11BQ9C0K0 894 aaPredicted RBP25.68■■□□□ 1.7
COL9A3-203ENST00000462700 ZCRB1Q8TBF4 217 aaKnown RBP25.67■■□□□ 1.7
COL9A3-203ENST00000462700 PARD3Q8TEW0 1356 aa25.67■■□□□ 1.7
COL9A3-203ENST00000462700 TATP17735 454 aaPredicted RBP25.66■■□□□ 1.7
COL9A3-203ENST00000462700 PTF1AQ7RTS3 328 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms