RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 TCP11L2Q8N4U5 519 aa13.04□□□□□ -0.32
PKP4-208ENST00000462335 SPATA31A5Q5VU36 1347 aa13.04□□□□□ -0.32
PKP4-208ENST00000462335 SPATA31A7Q8IWB4 1347 aa13.04□□□□□ -0.32
PKP4-208ENST00000462335 CCDC7Q96M83 1385 aa13.04□□□□□ -0.32
PKP4-208ENST00000462335 PDE3BQ13370 1112 aa13.03□□□□□ -0.32
PKP4-208ENST00000462335 IP6K1Q92551 441 aa13.03□□□□□ -0.32
PKP4-208ENST00000462335 THRAP3Q9Y2W1 955 aaKnown RBP13.03□□□□□ -0.32
PKP4-208ENST00000462335 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.02□□□□□ -0.32
PKP4-208ENST00000462335 CRYBG1Q9Y4K1 1723 aa13.02□□□□□ -0.32
PKP4-208ENST00000462335 RRS1Q15050 365 aaKnown RBP13.02□□□□□ -0.33
PKP4-208ENST00000462335 ANKRD24Q8TF21 1146 aa13.02□□□□□ -0.33
PKP4-208ENST00000462335 AXIN2Q9Y2T1 843 aa13.02□□□□□ -0.33
PKP4-208ENST00000462335 SPATA31A1Q5TZJ5 1347 aa13.02□□□□□ -0.33
PKP4-208ENST00000462335 WASHC2AQ641Q2 1341 aa13.02□□□□□ -0.33
PKP4-208ENST00000462335 CDK12Q9NYV4 1490 aaPredicted RBP13.02□□□□□ -0.33
PKP4-208ENST00000462335 KIF20BQ96Q89 1820 aa13.02□□□□□ -0.33
PKP4-208ENST00000462335 FBLN1P23142 703 aa13.01□□□□□ -0.33
PKP4-208ENST00000462335 SF3B2Q13435 895 aaKnown RBP13.01□□□□□ -0.33
PKP4-208ENST00000462335 KRT27Q7Z3Y8 459 aa13.01□□□□□ -0.33
PKP4-208ENST00000462335 WDR17Q8IZU2 1322 aa13.01□□□□□ -0.33
PKP4-208ENST00000462335 OVOS2A0A0J9YW53 1432 aa13.01□□□□□ -0.33
PKP4-208ENST00000462335 OVOS2Q6IE36 1432 aa13.01□□□□□ -0.33
PKP4-208ENST00000462335 MYOM1P52179 1685 aa13.01□□□□□ -0.33
PKP4-208ENST00000462335 CAMTA1Q9Y6Y1 1673 aa13□□□□□ -0.33
PKP4-208ENST00000462335 SMG6Q86US8 1419 aaKnown RBP13□□□□□ -0.33
PKP4-208ENST00000462335 NSD2O96028 1365 aa13□□□□□ -0.33
PKP4-208ENST00000462335 MAP3K19Q56UN5 1328 aa13□□□□□ -0.33
PKP4-208ENST00000462335 CC2D1BQ5T0F9 858 aaKnown RBP13□□□□□ -0.33
PKP4-208ENST00000462335 CDCA7Q9BWT1 371 aaPredicted RBP13□□□□□ -0.33
PKP4-208ENST00000462335 CRB1P82279 1406 aa12.99□□□□□ -0.33
PKP4-208ENST00000462335 HOXC9P31274 260 aa12.99□□□□□ -0.33
PKP4-208ENST00000462335 CARD10Q9BWT7 1032 aa12.99□□□□□ -0.33
PKP4-208ENST00000462335 COL5A2P05997 1499 aaPredicted RBP12.98□□□□□ -0.33
PKP4-208ENST00000462335 ONECUT3O60422 494 aaPredicted RBP12.98□□□□□ -0.33
PKP4-208ENST00000462335 BARGINQ6ZT62 677 aa12.98□□□□□ -0.33
PKP4-208ENST00000462335 LTN1O94822 1766 aa12.98□□□□□ -0.33
PKP4-208ENST00000462335 NFAT5O94916 1531 aa12.98□□□□□ -0.33
PKP4-208ENST00000462335 RGS12O14924 1447 aa12.97□□□□□ -0.33
PKP4-208ENST00000462335 BLMP54132 1417 aaPredicted RBP12.97□□□□□ -0.33
PKP4-208ENST00000462335 EXOC5O00471 708 aa12.97□□□□□ -0.33
PKP4-208ENST00000462335 DDB1Q16531 1140 aa12.97□□□□□ -0.33
PKP4-208ENST00000462335 NRAPQ86VF7 1730 aa12.96□□□□□ -0.33
PKP4-208ENST00000462335 RGPD5Q99666 1765 aa12.96□□□□□ -0.34
PKP4-208ENST00000462335 RTL1A6NKG5 1358 aa12.95□□□□□ -0.34
PKP4-208ENST00000462335 FLT4P35916 1363 aa12.95□□□□□ -0.34
PKP4-208ENST00000462335 GLI3P10071 1580 aa12.95□□□□□ -0.34
PKP4-208ENST00000462335 ERBB3P21860 1342 aa12.95□□□□□ -0.34
PKP4-208ENST00000462335 HSP90AB2PQ58FF8 381 aa12.95□□□□□ -0.34
PKP4-208ENST00000462335 RAPGEF4Q8WZA2 1011 aa12.95□□□□□ -0.34
PKP4-208ENST00000462335 EMILIN1Q9Y6C2 1016 aa12.95□□□□□ -0.34
PKP4-208ENST00000462335 USP54Q70EL1 1684 aa12.95□□□□□ -0.34
PKP4-208ENST00000462335 KIF24Q5T7B8 1368 aa12.94□□□□□ -0.34
PKP4-208ENST00000462335 ABCC6O95255 1503 aa12.94□□□□□ -0.34
PKP4-208ENST00000462335 LMO7Q8WWI1 1683 aa12.94□□□□□ -0.34
PKP4-208ENST00000462335 IL2RBP14784 551 aa12.94□□□□□ -0.34
PKP4-208ENST00000462335 DDX10Q13206 875 aaKnown RBP12.94□□□□□ -0.34
PKP4-208ENST00000462335 FAM196AQ6ZSG2 479 aa12.94□□□□□ -0.34
PKP4-208ENST00000462335 CCDC125Q86Z20 511 aa12.94□□□□□ -0.34
PKP4-208ENST00000462335 AMER1Q5JTC6 1135 aaPredicted RBP12.93□□□□□ -0.34
PKP4-208ENST00000462335 POLKQ9UBT6 870 aa12.93□□□□□ -0.34
PKP4-208ENST00000462335 INSRP06213 1382 aa12.93□□□□□ -0.34
PKP4-208ENST00000462335 COL18A1P39060 1754 aa12.92□□□□□ -0.34
PKP4-208ENST00000462335 TATP17735 454 aaPredicted RBP12.92□□□□□ -0.34
PKP4-208ENST00000462335 UPF1Q92900 1129 aaKnown RBP eCLIP12.92□□□□□ -0.34
PKP4-208ENST00000462335 CFAP53Q96M91 514 aa12.92□□□□□ -0.34
PKP4-208ENST00000462335 MAP2P11137 1827 aaKnown RBP12.92□□□□□ -0.34
PKP4-208ENST00000462335 PER1O15534 1290 aaPredicted RBP12.91□□□□□ -0.34
PKP4-208ENST00000462335 FAM182BQ5T319 152 aa12.91□□□□□ -0.34
PKP4-208ENST00000462335 MTHFSP49914 203 aa12.9□□□□□ -0.34
PKP4-208ENST00000462335 USHBP1Q8N6Y0 703 aa12.9□□□□□ -0.34
PKP4-208ENST00000462335 DDX54Q8TDD1 881 aaKnown RBP12.9□□□□□ -0.34
PKP4-208ENST00000462335 ANKRD26Q9UPS8 1709 aa12.89□□□□□ -0.35
PKP4-208ENST00000462335 NBPF6Q5VWK0 638 aa12.89□□□□□ -0.35
PKP4-208ENST00000462335 NBPF4Q96M43 638 aa12.89□□□□□ -0.35
PKP4-208ENST00000462335 BRWD3Q6RI45 1802 aa12.88□□□□□ -0.35
PKP4-208ENST00000462335 ZNF316A6NFI3 1004 aaPredicted RBP12.88□□□□□ -0.35
PKP4-208ENST00000462335 BAG6P46379 1132 aa12.88□□□□□ -0.35
PKP4-208ENST00000462335 ZCRB1Q8TBF4 217 aaKnown RBP12.88□□□□□ -0.35
PKP4-208ENST00000462335 KAT6BQ8WYB5 2073 aa12.88□□□□□ -0.35
PKP4-208ENST00000462335 NPC1L1Q9UHC9 1359 aa12.87□□□□□ -0.35
PKP4-208ENST00000462335 TRIM37O94972 964 aa12.87□□□□□ -0.35
PKP4-208ENST00000462335 FAM208AQ9UK61 1670 aaKnown RBP12.86□□□□□ -0.35
PKP4-208ENST00000462335 DIAPH1O60610 1272 aaKnown RBP12.86□□□□□ -0.35
PKP4-208ENST00000462335 EIF4A2Q14240 407 aaKnown RBP12.86□□□□□ -0.35
PKP4-208ENST00000462335 SPG7Q9UQ90 795 aa12.86□□□□□ -0.35
PKP4-208ENST00000462335 NUDCQ9Y266 331 aa12.86□□□□□ -0.35
PKP4-208ENST00000462335 U2SURPO15042 1029 aaKnown RBP12.85□□□□□ -0.35
PKP4-208ENST00000462335 APBA3O96018 575 aa12.85□□□□□ -0.35
PKP4-208ENST00000462335 EYA1Q99502 592 aa12.85□□□□□ -0.35
PKP4-208ENST00000462335 MARCH10Q8NA82 808 aaPredicted RBP12.84□□□□□ -0.35
PKP4-208ENST00000462335 SYTL4Q96C24 671 aaPredicted RBP12.84□□□□□ -0.35
PKP4-208ENST00000462335 OVOS2A0A0G2JMS6 1433 aa12.84□□□□□ -0.35
PKP4-208ENST00000462335 THSD7AQ9UPZ6 1657 aa12.83□□□□□ -0.35
PKP4-208ENST00000462335 NEFMP07197 916 aa12.83□□□□□ -0.36
PKP4-208ENST00000462335 PLEKHO1Q53GL0 409 aaPredicted RBP12.83□□□□□ -0.36
PKP4-208ENST00000462335 SULT6B1Q6IMI4 303 aa12.83□□□□□ -0.36
PKP4-208ENST00000462335 RALBP1Q15311 655 aa12.82□□□□□ -0.36
PKP4-208ENST00000462335 ACSBG1Q96GR2 724 aa12.82□□□□□ -0.36
PKP4-208ENST00000462335 PEAK1Q9H792 1746 aa12.82□□□□□ -0.36
PKP4-208ENST00000462335 PARP4Q9UKK3 1724 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms