RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 NBPF14Q5TI25 921 aa21.05■□□□□ 0.96
DNMT3A-207ENST00000461228 USP35Q9P2H5 1018 aa21.05■□□□□ 0.96
DNMT3A-207ENST00000461228 WDR17Q8IZU2 1322 aa21.04■□□□□ 0.96
DNMT3A-207ENST00000461228 TNS2Q63HR2 1409 aa21.04■□□□□ 0.96
DNMT3A-207ENST00000461228 EVC2Q86UK5 1308 aa21.04■□□□□ 0.96
DNMT3A-207ENST00000461228 FAM208AQ9UK61 1670 aaKnown RBP21.03■□□□□ 0.96
DNMT3A-207ENST00000461228 PLSCR1O15162 318 aa21.03■□□□□ 0.96
DNMT3A-207ENST00000461228 TTC21AQ8NDW8 1320 aa21.03■□□□□ 0.96
DNMT3A-207ENST00000461228 LTN1O94822 1766 aa21.01■□□□□ 0.95
DNMT3A-207ENST00000461228 CABP2Q9NPB3 220 aa21.01■□□□□ 0.95
DNMT3A-207ENST00000461228 KCNH5Q8NCM2 988 aa21■□□□□ 0.95
DNMT3A-207ENST00000461228 PAPPAQ13219 1627 aa21■□□□□ 0.95
DNMT3A-207ENST00000461228 NLRP6P59044 892 aa20.99■□□□□ 0.95
DNMT3A-207ENST00000461228 CCDC7Q96M83 1385 aa20.98■□□□□ 0.95
DNMT3A-207ENST00000461228 ZNF692Q9BU19 519 aaPredicted RBP20.98■□□□□ 0.95
DNMT3A-207ENST00000461228 CABP1Q9NZU7 370 aa20.98■□□□□ 0.95
DNMT3A-207ENST00000461228 DDB1Q16531 1140 aa20.97■□□□□ 0.95
DNMT3A-207ENST00000461228 SPON1Q9HCB6 807 aa20.97■□□□□ 0.95
DNMT3A-207ENST00000461228 UTRNP46939 3433 aa20.97■□□□□ 0.95
DNMT3A-207ENST00000461228 MYOM1P52179 1685 aa20.96■□□□□ 0.95
DNMT3A-207ENST00000461228 QSER1Q2KHR3 1735 aa20.96■□□□□ 0.95
DNMT3A-207ENST00000461228 ARHGEF25Q86VW2 580 aa20.96■□□□□ 0.95
DNMT3A-207ENST00000461228 BCL11BQ9C0K0 894 aaPredicted RBP20.96■□□□□ 0.95
DNMT3A-207ENST00000461228 ROCK2O75116 1388 aaKnown RBP20.96■□□□□ 0.95
DNMT3A-207ENST00000461228 USP31Q70CQ4 1352 aa20.96■□□□□ 0.95
DNMT3A-207ENST00000461228 CARD10Q9BWT7 1032 aa20.94■□□□□ 0.94
DNMT3A-207ENST00000461228 TTC21BQ7Z4L5 1316 aa20.94■□□□□ 0.94
DNMT3A-207ENST00000461228 KCNQ2O43526 872 aa20.93■□□□□ 0.94
DNMT3A-207ENST00000461228 TOM1L2Q6ZVM7 507 aa20.93■□□□□ 0.94
DNMT3A-207ENST00000461228 CD163L1Q9NR16 1453 aa20.92■□□□□ 0.94
DNMT3A-207ENST00000461228 L3MBTL2Q969R5 705 aa20.91■□□□□ 0.94
DNMT3A-207ENST00000461228 BTAF1O14981 1849 aa20.9■□□□□ 0.94
DNMT3A-207ENST00000461228 COL24A1Q17RW2 1714 aa20.9■□□□□ 0.94
DNMT3A-207ENST00000461228 KTN1Q86UP2 1357 aaKnown RBP20.89■□□□□ 0.93
DNMT3A-207ENST00000461228 AXIN2Q9Y2T1 843 aa20.89■□□□□ 0.93
DNMT3A-207ENST00000461228 ANO8Q9HCE9 1232 aaPredicted RBP20.88■□□□□ 0.93
DNMT3A-207ENST00000461228 EDC4Q6P2E9 1401 aaKnown RBP20.87■□□□□ 0.93
DNMT3A-207ENST00000461228 ERBB3P21860 1342 aa20.87■□□□□ 0.93
DNMT3A-207ENST00000461228 MARCH10Q8NA82 808 aaPredicted RBP20.87■□□□□ 0.93
DNMT3A-207ENST00000461228 CHD4Q14839 1912 aa20.86■□□□□ 0.93
DNMT3A-207ENST00000461228 PPP1R1BQ9UD71 204 aaPredicted RBP20.86■□□□□ 0.93
DNMT3A-207ENST00000461228 MAP3K5Q99683 1374 aa20.85■□□□□ 0.93
DNMT3A-207ENST00000461228 YY1P25490 414 aa20.82■□□□□ 0.92
DNMT3A-207ENST00000461228 PUS7Q96PZ0 661 aaKnown RBP20.82■□□□□ 0.92
DNMT3A-207ENST00000461228 DCAF8L1A6NGE4 600 aa20.81■□□□□ 0.92
DNMT3A-207ENST00000461228 PROM2Q8N271 834 aa20.81■□□□□ 0.92
DNMT3A-207ENST00000461228 SHANK3Q9BYB0 1731 aa20.81■□□□□ 0.92
DNMT3A-207ENST00000461228 LY75O60449 1722 aa20.8■□□□□ 0.92
DNMT3A-207ENST00000461228 ZBTB7CA1YPR0 619 aa20.79■□□□□ 0.92
DNMT3A-207ENST00000461228 EXOC5O00471 708 aa20.79■□□□□ 0.92
DNMT3A-207ENST00000461228 CSB-PGBD3P0DP91 1061 aa20.79■□□□□ 0.92
DNMT3A-207ENST00000461228 TXNRD1Q16881 649 aa20.79■□□□□ 0.92
DNMT3A-207ENST00000461228 PTGER2P43116 358 aa20.78■□□□□ 0.92
DNMT3A-207ENST00000461228 DOT1LQ8TEK3 1739 aa20.78■□□□□ 0.92
DNMT3A-207ENST00000461228 TUBGCP6Q96RT7 1819 aa20.77■□□□□ 0.92
DNMT3A-207ENST00000461228 SLC15A2Q16348 729 aa20.77■□□□□ 0.92
DNMT3A-207ENST00000461228 STK32BQ9NY57 414 aa20.77■□□□□ 0.92
DNMT3A-207ENST00000461228 A0A1W2PP64 1363 aa20.76■□□□□ 0.91
DNMT3A-207ENST00000461228 PTF1AQ7RTS3 328 aa20.76■□□□□ 0.91
DNMT3A-207ENST00000461228 MTFR1LQ9H019 292 aa20.76■□□□□ 0.91
DNMT3A-207ENST00000461228 GOLGB1Q14789 3259 aaKnown RBP20.75■□□□□ 0.91
DNMT3A-207ENST00000461228 SGIP1Q9BQI5 828 aa20.75■□□□□ 0.91
DNMT3A-207ENST00000461228 IL2RBP14784 551 aa20.74■□□□□ 0.91
DNMT3A-207ENST00000461228 RTL1A6NKG5 1358 aa20.72■□□□□ 0.91
DNMT3A-207ENST00000461228 HDGFL2Q7Z4V5 671 aaPredicted RBP20.72■□□□□ 0.91
DNMT3A-207ENST00000461228 TERF2IPQ9NYB0 399 aa20.71■□□□□ 0.91
DNMT3A-207ENST00000461228 SLC24A1O60721 1099 aa20.7■□□□□ 0.9
DNMT3A-207ENST00000461228 SIN3AQ96ST3 1273 aa20.7■□□□□ 0.9
DNMT3A-207ENST00000461228 SOX12O15370 315 aa20.69■□□□□ 0.9
DNMT3A-207ENST00000461228 NME9Q86XW9 330 aa20.69■□□□□ 0.9
DNMT3A-207ENST00000461228 CARD11Q9BXL7 1154 aa20.69■□□□□ 0.9
DNMT3A-207ENST00000461228 PDGFDQ9GZP0 370 aaPredicted RBP20.69■□□□□ 0.9
DNMT3A-207ENST00000461228 ZBTB7AO95365 584 aa20.68■□□□□ 0.9
DNMT3A-207ENST00000461228 ANKRD24Q8TF21 1146 aa20.68■□□□□ 0.9
DNMT3A-207ENST00000461228 KIF20BQ96Q89 1820 aa20.68■□□□□ 0.9
DNMT3A-207ENST00000461228 RGPD2P0DJD1 1756 aa20.67■□□□□ 0.9
DNMT3A-207ENST00000461228 SLC27A3Q5K4L6 730 aa20.67■□□□□ 0.9
DNMT3A-207ENST00000461228 NLRP2Q9NX02 1062 aa20.67■□□□□ 0.9
DNMT3A-207ENST00000461228 KAT6BQ8WYB5 2073 aa20.66■□□□□ 0.9
DNMT3A-207ENST00000461228 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.66■□□□□ 0.9
DNMT3A-207ENST00000461228 ANKRD36BQ8N2N9 1353 aa20.66■□□□□ 0.9
DNMT3A-207ENST00000461228 ANKRD26Q9UPS8 1709 aa20.66■□□□□ 0.9
DNMT3A-207ENST00000461228 IP6K1Q92551 441 aa20.65■□□□□ 0.9
DNMT3A-207ENST00000461228 SYT17Q9BSW7 474 aa20.65■□□□□ 0.9
DNMT3A-207ENST00000461228 FHDC1Q9C0D6 1143 aaPredicted RBP20.65■□□□□ 0.9
DNMT3A-207ENST00000461228 C5P01031 1676 aa20.64■□□□□ 0.9
DNMT3A-207ENST00000461228 TONSLQ96HA7 1378 aa20.64■□□□□ 0.89
DNMT3A-207ENST00000461228 SLC16A10Q8TF71 515 aa20.64■□□□□ 0.89
DNMT3A-207ENST00000461228 NSD2O96028 1365 aa20.62■□□□□ 0.89
DNMT3A-207ENST00000461228 KIF24Q5T7B8 1368 aa20.62■□□□□ 0.89
DNMT3A-207ENST00000461228 PKD1L3Q7Z443 1732 aa20.62■□□□□ 0.89
DNMT3A-207ENST00000461228 MEGF6O75095 1541 aa20.62■□□□□ 0.89
DNMT3A-207ENST00000461228 TAF1LQ8IZX4 1826 aa20.62■□□□□ 0.89
DNMT3A-207ENST00000461228 CGNL1Q0VF96 1302 aa20.61■□□□□ 0.89
DNMT3A-207ENST00000461228 AKT1S1Q96B36 256 aa20.61■□□□□ 0.89
DNMT3A-207ENST00000461228 NEUROD1Q13562 356 aa20.6■□□□□ 0.89
DNMT3A-207ENST00000461228 ZNF827Q17R98 1081 aa20.6■□□□□ 0.89
DNMT3A-207ENST00000461228 ARXQ96QS3 562 aa20.6■□□□□ 0.89
DNMT3A-207ENST00000461228 TESK2Q96S53 571 aa20.6■□□□□ 0.89
DNMT3A-207ENST00000461228 SLC12A5Q9H2X9 1139 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms