RNA–Protein interactions for RNA: ENST00000457463.1

CNOT3-205, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-205ENST00000457463 CGNL1Q0VF96 1302 aa16.82■□□□□ 0.28
CNOT3-205ENST00000457463 EVA1CP58658 441 aa16.82■□□□□ 0.28
CNOT3-205ENST00000457463 RRS1Q15050 365 aaKnown RBP16.82■□□□□ 0.28
CNOT3-205ENST00000457463 KIF20BQ96Q89 1820 aa16.82■□□□□ 0.28
CNOT3-205ENST00000457463 MAP3K19Q56UN5 1328 aa16.81■□□□□ 0.28
CNOT3-205ENST00000457463 SPATA31A5Q5VU36 1347 aa16.81■□□□□ 0.28
CNOT3-205ENST00000457463 SPATA31A7Q8IWB4 1347 aa16.81■□□□□ 0.28
CNOT3-205ENST00000457463 PER1O15534 1290 aaPredicted RBP16.81■□□□□ 0.28
CNOT3-205ENST00000457463 USP35Q9P2H5 1018 aa16.8■□□□□ 0.28
CNOT3-205ENST00000457463 SPATA31A1Q5TZJ5 1347 aa16.79■□□□□ 0.28
CNOT3-205ENST00000457463 FAM98CQ17RN3 349 aaKnown RBP16.79■□□□□ 0.28
CNOT3-205ENST00000457463 TNNT2P45379 298 aaPredicted RBP16.78■□□□□ 0.28
CNOT3-205ENST00000457463 AMER1Q5JTC6 1135 aaPredicted RBP16.78■□□□□ 0.28
CNOT3-205ENST00000457463 KNSTRNQ9Y448 316 aa16.78■□□□□ 0.28
CNOT3-205ENST00000457463 CDK12Q9NYV4 1490 aaPredicted RBP16.78■□□□□ 0.28
CNOT3-205ENST00000457463 LTN1O94822 1766 aa16.77■□□□□ 0.28
CNOT3-205ENST00000457463 RGPD5Q99666 1765 aa16.77■□□□□ 0.28
CNOT3-205ENST00000457463 ONECUT3O60422 494 aaPredicted RBP16.76■□□□□ 0.27
CNOT3-205ENST00000457463 HOXC9P31274 260 aa16.76■□□□□ 0.27
CNOT3-205ENST00000457463 CNGB1Q14028 1251 aaPredicted RBP16.76■□□□□ 0.27
CNOT3-205ENST00000457463 SEPT12Q8IYM1 358 aa16.76■□□□□ 0.27
CNOT3-205ENST00000457463 IP6K1Q92551 441 aa16.76■□□□□ 0.27
CNOT3-205ENST00000457463 EMILIN1Q9Y6C2 1016 aa16.76■□□□□ 0.27
CNOT3-205ENST00000457463 WDR17Q8IZU2 1322 aa16.75■□□□□ 0.27
CNOT3-205ENST00000457463 CSB-PGBD3P0DP91 1061 aa16.75■□□□□ 0.27
CNOT3-205ENST00000457463 AMPHP49418 695 aa16.75■□□□□ 0.27
CNOT3-205ENST00000457463 TOM1L2Q6ZVM7 507 aa16.75■□□□□ 0.27
CNOT3-205ENST00000457463 LTV1Q96GA3 475 aaPredicted RBP16.75■□□□□ 0.27
CNOT3-205ENST00000457463 CRB1P82279 1406 aa16.74■□□□□ 0.27
CNOT3-205ENST00000457463 CC2D1BQ5T0F9 858 aaKnown RBP16.74■□□□□ 0.27
CNOT3-205ENST00000457463 ANKRD24Q8TF21 1146 aa16.74■□□□□ 0.27
CNOT3-205ENST00000457463 PEAK1Q9H792 1746 aa16.73■□□□□ 0.27
CNOT3-205ENST00000457463 ERBB3P21860 1342 aa16.73■□□□□ 0.27
CNOT3-205ENST00000457463 SOCS7O14512 581 aa16.73■□□□□ 0.27
CNOT3-205ENST00000457463 HSP90AB2PQ58FF8 381 aa16.73■□□□□ 0.27
CNOT3-205ENST00000457463 TCP11L2Q8N4U5 519 aa16.73■□□□□ 0.27
CNOT3-205ENST00000457463 POLKQ9UBT6 870 aa16.73■□□□□ 0.27
CNOT3-205ENST00000457463 ABCC6O95255 1503 aa16.72■□□□□ 0.27
CNOT3-205ENST00000457463 A0A0G2JS52 829 aa16.72■□□□□ 0.27
CNOT3-205ENST00000457463 MYT1Q01538 1121 aa16.72■□□□□ 0.27
CNOT3-205ENST00000457463 MORC1Q86VD1 984 aa16.72■□□□□ 0.27
CNOT3-205ENST00000457463 NSD2O96028 1365 aa16.72■□□□□ 0.27
CNOT3-205ENST00000457463 ANKRD26Q9UPS8 1709 aa16.71■□□□□ 0.27
CNOT3-205ENST00000457463 PPM1GO15355 546 aaPredicted RBP16.71■□□□□ 0.27
CNOT3-205ENST00000457463 BLMP54132 1417 aaPredicted RBP16.7■□□□□ 0.26
CNOT3-205ENST00000457463 BARGINQ6ZT62 677 aa16.7■□□□□ 0.26
CNOT3-205ENST00000457463 CARD10Q9BWT7 1032 aa16.7■□□□□ 0.26
CNOT3-205ENST00000457463 NLRP2Q9NX02 1062 aa16.7■□□□□ 0.26
CNOT3-205ENST00000457463 THSD7AQ9UPZ6 1657 aa16.69■□□□□ 0.26
CNOT3-205ENST00000457463 RTL1A6NKG5 1358 aa16.69■□□□□ 0.26
CNOT3-205ENST00000457463 FAM182BQ5T319 152 aa16.69■□□□□ 0.26
CNOT3-205ENST00000457463 FLT4P35916 1363 aa16.68■□□□□ 0.26
CNOT3-205ENST00000457463 BRWD3Q6RI45 1802 aa16.68■□□□□ 0.26
CNOT3-205ENST00000457463 DDX10Q13206 875 aaKnown RBP16.67■□□□□ 0.26
CNOT3-205ENST00000457463 NBPF6Q5VWK0 638 aa16.67■□□□□ 0.26
CNOT3-205ENST00000457463 NBPF4Q96M43 638 aa16.67■□□□□ 0.26
CNOT3-205ENST00000457463 THRAP3Q9Y2W1 955 aaKnown RBP16.67■□□□□ 0.26
CNOT3-205ENST00000457463 INSRP06213 1382 aa16.66■□□□□ 0.26
CNOT3-205ENST00000457463 KRT27Q7Z3Y8 459 aa16.66■□□□□ 0.26
CNOT3-205ENST00000457463 USHBP1Q8N6Y0 703 aa16.66■□□□□ 0.26
CNOT3-205ENST00000457463 MAP2P11137 1827 aaKnown RBP16.66■□□□□ 0.26
CNOT3-205ENST00000457463 DISP2A7MBM2 1401 aa16.65■□□□□ 0.26
CNOT3-205ENST00000457463 KIF24Q5T7B8 1368 aa16.64■□□□□ 0.26
CNOT3-205ENST00000457463 NPC1L1Q9UHC9 1359 aa16.64■□□□□ 0.26
CNOT3-205ENST00000457463 UPF1Q92900 1129 aaKnown RBP eCLIP16.64■□□□□ 0.25
CNOT3-205ENST00000457463 RGPD2P0DJD1 1756 aa16.64■□□□□ 0.25
CNOT3-205ENST00000457463 EP400Q96L91 3159 aa16.63■□□□□ 0.25
CNOT3-205ENST00000457463 SMG6Q86US8 1419 aaKnown RBP16.62■□□□□ 0.25
CNOT3-205ENST00000457463 EIF4A2Q14240 407 aaKnown RBP16.62■□□□□ 0.25
CNOT3-205ENST00000457463 MTHFSP49914 203 aa16.61■□□□□ 0.25
CNOT3-205ENST00000457463 LRRC37A3O60309 1634 aa16.6■□□□□ 0.25
CNOT3-205ENST00000457463 FAM208AQ9UK61 1670 aaKnown RBP16.6■□□□□ 0.25
CNOT3-205ENST00000457463 IL2RBP14784 551 aa16.6■□□□□ 0.25
CNOT3-205ENST00000457463 PDE3BQ13370 1112 aa16.6■□□□□ 0.25
CNOT3-205ENST00000457463 DDB1Q16531 1140 aa16.6■□□□□ 0.25
CNOT3-205ENST00000457463 EYA1Q99502 592 aa16.6■□□□□ 0.25
CNOT3-205ENST00000457463 PARP4Q9UKK3 1724 aaKnown RBP16.59■□□□□ 0.25
CNOT3-205ENST00000457463 WNK3Q9BYP7 1800 aa16.59■□□□□ 0.25
CNOT3-205ENST00000457463 ZNF316A6NFI3 1004 aaPredicted RBP16.59■□□□□ 0.25
CNOT3-205ENST00000457463 MARCH10Q8NA82 808 aaPredicted RBP16.58■□□□□ 0.24
CNOT3-205ENST00000457463 CDCA7Q9BWT1 371 aaPredicted RBP16.58■□□□□ 0.24
CNOT3-205ENST00000457463 MEGF6O75095 1541 aa16.58■□□□□ 0.24
CNOT3-205ENST00000457463 EXOC5O00471 708 aa16.57■□□□□ 0.24
CNOT3-205ENST00000457463 PPP2R1AP30153 589 aa16.56■□□□□ 0.24
CNOT3-205ENST00000457463 IL13P35225 146 aa16.56■□□□□ 0.24
CNOT3-205ENST00000457463 NCAPD2Q15021 1401 aa16.54■□□□□ 0.24
CNOT3-205ENST00000457463 TNS2Q63HR2 1409 aa16.54■□□□□ 0.24
CNOT3-205ENST00000457463 AEBP1Q8IUX7 1158 aa16.54■□□□□ 0.24
CNOT3-205ENST00000457463 PARD3Q8TEW0 1356 aa16.53■□□□□ 0.24
CNOT3-205ENST00000457463 IGSF1Q8N6C5 1336 aa16.53■□□□□ 0.24
CNOT3-205ENST00000457463 PTF1AQ7RTS3 328 aa16.53■□□□□ 0.24
CNOT3-205ENST00000457463 TRIM37O94972 964 aa16.52■□□□□ 0.24
CNOT3-205ENST00000457463 FAM196AQ6ZSG2 479 aa16.52■□□□□ 0.24
CNOT3-205ENST00000457463 DDX54Q8TDD1 881 aaKnown RBP16.52■□□□□ 0.24
CNOT3-205ENST00000457463 COL3A1P02461 1466 aaPredicted RBP16.52■□□□□ 0.23
CNOT3-205ENST00000457463 OVOS2A0A0G2JMS6 1433 aa16.52■□□□□ 0.23
CNOT3-205ENST00000457463 TATP17735 454 aaPredicted RBP16.51■□□□□ 0.23
CNOT3-205ENST00000457463 DEFB132Q7Z7B7 95 aa16.51■□□□□ 0.23
CNOT3-205ENST00000457463 ZCRB1Q8TBF4 217 aaKnown RBP16.51■□□□□ 0.23
CNOT3-205ENST00000457463 RAPGEF4Q8WZA2 1011 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms