RNA–Protein interactions for RNA: ENST00000457270.5

TOP3B-214, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 2,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-214ENST00000457270 TRIM35Q9UPQ4 493 aa17.32■□□□□ 0.36
TOP3B-214ENST00000457270 TRAPPC8Q9Y2L5 1435 aa17.32■□□□□ 0.36
TOP3B-214ENST00000457270 SETBP1Q9Y6X0 1596 aa17.32■□□□□ 0.36
TOP3B-214ENST00000457270 PLEKHF1Q96S99 279 aa17.31■□□□□ 0.36
TOP3B-214ENST00000457270 TMEM63CQ9P1W3 806 aa17.31■□□□□ 0.36
TOP3B-214ENST00000457270 RBM27Q9P2N5 1060 aaKnown RBP17.31■□□□□ 0.36
TOP3B-214ENST00000457270 HMGN5P82970 282 aaKnown RBP17.31■□□□□ 0.36
TOP3B-214ENST00000457270 VGLL3A8MV65 326 aa17.31■□□□□ 0.36
TOP3B-214ENST00000457270 TMPOP42166 694 aaKnown RBP17.31■□□□□ 0.36
TOP3B-214ENST00000457270 YEATS2Q9ULM3 1422 aa17.31■□□□□ 0.36
TOP3B-214ENST00000457270 PKP1Q13835 747 aa17.3■□□□□ 0.36
TOP3B-214ENST00000457270 MBD3O95983 291 aa17.3■□□□□ 0.36
TOP3B-214ENST00000457270 SYCE3A1L190 88 aa17.29■□□□□ 0.36
TOP3B-214ENST00000457270 PIK3R4Q99570 1358 aa17.29■□□□□ 0.36
TOP3B-214ENST00000457270 ZBTB7BO15156 539 aaPredicted RBP17.29■□□□□ 0.36
TOP3B-214ENST00000457270 SLC12A5Q9H2X9 1139 aa17.28■□□□□ 0.36
TOP3B-214ENST00000457270 ZDHHC9Q9Y397 364 aa17.28■□□□□ 0.36
TOP3B-214ENST00000457270 ZNF710Q8N1W2 664 aa17.28■□□□□ 0.36
TOP3B-214ENST00000457270 ZNF428Q96B54 188 aa17.28■□□□□ 0.36
TOP3B-214ENST00000457270 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.28■□□□□ 0.36
TOP3B-214ENST00000457270 ADGRF5Q8IZF2 1346 aa17.28■□□□□ 0.36
TOP3B-214ENST00000457270 QRICH2Q9H0J4 1663 aa17.27■□□□□ 0.36
TOP3B-214ENST00000457270 USP26Q9BXU7 913 aa17.27■□□□□ 0.36
TOP3B-214ENST00000457270 VWDEQ8N2E2 1590 aa17.27■□□□□ 0.36
TOP3B-214ENST00000457270 PIBF1Q8WXW3 757 aa17.26■□□□□ 0.35
TOP3B-214ENST00000457270 PLCD3Q8N3E9 789 aa17.26■□□□□ 0.35
TOP3B-214ENST00000457270 GSPT1P15170 499 aaKnown RBP17.25■□□□□ 0.35
TOP3B-214ENST00000457270 ST18O60284 1047 aa17.25■□□□□ 0.35
TOP3B-214ENST00000457270 PTMAP06454 111 aaKnown RBP17.25■□□□□ 0.35
TOP3B-214ENST00000457270 CDK11BP21127 795 aaKnown RBP17.25■□□□□ 0.35
TOP3B-214ENST00000457270 ARHGAP45Q92619 1136 aa17.25■□□□□ 0.35
TOP3B-214ENST00000457270 ABCC1P33527 1531 aa17.25■□□□□ 0.35
TOP3B-214ENST00000457270 KIF1BO60333 1816 aa17.25■□□□□ 0.35
TOP3B-214ENST00000457270 ZNF830Q96NB3 372 aaPredicted RBP17.25■□□□□ 0.35
TOP3B-214ENST00000457270 PTCH1Q13635 1447 aa17.24■□□□□ 0.35
TOP3B-214ENST00000457270 DNTTIP2Q5QJE6 756 aaKnown RBP17.24■□□□□ 0.35
TOP3B-214ENST00000457270 TAF3Q5VWG9 929 aa17.24■□□□□ 0.35
TOP3B-214ENST00000457270 TSPY26PQ9H489 355 aa17.24■□□□□ 0.35
TOP3B-214ENST00000457270 COL3A1P02461 1466 aaPredicted RBP17.24■□□□□ 0.35
TOP3B-214ENST00000457270 NSFL1CQ9UNZ2 370 aaKnown RBP17.24■□□□□ 0.35
TOP3B-214ENST00000457270 SIRT2Q8IXJ6 389 aa17.23■□□□□ 0.35
TOP3B-214ENST00000457270 ZGPATQ8N5A5 531 aaKnown RBP17.23■□□□□ 0.35
TOP3B-214ENST00000457270 PUS7Q96PZ0 661 aaKnown RBP17.23■□□□□ 0.35
TOP3B-214ENST00000457270 ZBTB7CA1YPR0 619 aa17.23■□□□□ 0.35
TOP3B-214ENST00000457270 AEBP2Q6ZN18 517 aaPredicted RBP17.22■□□□□ 0.35
TOP3B-214ENST00000457270 PAXIP1Q6ZW49 1069 aaPredicted RBP17.22■□□□□ 0.35
TOP3B-214ENST00000457270 UVSSAQ2YD98 709 aa17.22■□□□□ 0.35
TOP3B-214ENST00000457270 PLEKHM2Q8IWE5 1019 aa17.22■□□□□ 0.35
TOP3B-214ENST00000457270 TSC1Q92574 1164 aa17.22■□□□□ 0.35
TOP3B-214ENST00000457270 JARID2Q92833 1246 aaPredicted RBP17.22■□□□□ 0.35
TOP3B-214ENST00000457270 ANKRD36BQ8N2N9 1353 aa17.22■□□□□ 0.35
TOP3B-214ENST00000457270 NOLC1Q14978 699 aaKnown RBP eCLIP17.22■□□□□ 0.35
TOP3B-214ENST00000457270 ATP2B3Q16720 1220 aa17.22■□□□□ 0.35
TOP3B-214ENST00000457270 INTS3Q68E01 1043 aaKnown RBP17.22■□□□□ 0.35
TOP3B-214ENST00000457270 CGNQ9P2M7 1197 aaKnown RBP17.22■□□□□ 0.35
TOP3B-214ENST00000457270 PLCH2O75038 1416 aa17.21■□□□□ 0.35
TOP3B-214ENST00000457270 FBLN2P98095 1184 aa17.21■□□□□ 0.35
TOP3B-214ENST00000457270 TTC22Q5TAA0 569 aa17.21■□□□□ 0.35
TOP3B-214ENST00000457270 RNF214Q8ND24 703 aa17.21■□□□□ 0.35
TOP3B-214ENST00000457270 SYAP1Q96A49 352 aaPredicted RBP17.21■□□□□ 0.35
TOP3B-214ENST00000457270 SPTLC3Q9NUV7 552 aa17.21■□□□□ 0.35
TOP3B-214ENST00000457270 FAM184AQ8NB25 1140 aa17.21■□□□□ 0.35
TOP3B-214ENST00000457270 KIF3AQ9Y496 699 aa17.21■□□□□ 0.35
TOP3B-214ENST00000457270 FKBP5Q13451 457 aaPredicted RBP17.19■□□□□ 0.34
TOP3B-214ENST00000457270 MROH2AA6NES4 1674 aa17.19■□□□□ 0.34
TOP3B-214ENST00000457270 ZFYVE16Q7Z3T8 1539 aa17.19■□□□□ 0.34
TOP3B-214ENST00000457270 PHF14O94880 888 aa17.19■□□□□ 0.34
TOP3B-214ENST00000457270 C1orf115Q9H7X2 142 aa17.19■□□□□ 0.34
TOP3B-214ENST00000457270 ABCC4O15439 1325 aa17.18■□□□□ 0.34
TOP3B-214ENST00000457270 ZBTB22O15209 634 aa17.18■□□□□ 0.34
TOP3B-214ENST00000457270 SPDYE4A6NLX3 237 aa17.18■□□□□ 0.34
TOP3B-214ENST00000457270 IGSF3O75054 1194 aa17.18■□□□□ 0.34
TOP3B-214ENST00000457270 UGGT1Q9NYU2 1555 aa17.18■□□□□ 0.34
TOP3B-214ENST00000457270 ADGRB1O14514 1584 aa17.17■□□□□ 0.34
TOP3B-214ENST00000457270 MRPL50Q8N5N7 158 aaKnown RBP17.17■□□□□ 0.34
TOP3B-214ENST00000457270 U2SURPO15042 1029 aaKnown RBP17.17■□□□□ 0.34
TOP3B-214ENST00000457270 BRD1O95696 1058 aa17.17■□□□□ 0.34
TOP3B-214ENST00000457270 EFCAB2Q5VUJ9 269 aa17.16■□□□□ 0.34
TOP3B-214ENST00000457270 CASC1Q6TDU7 716 aa17.16■□□□□ 0.34
TOP3B-214ENST00000457270 KIF24Q5T7B8 1368 aa17.16■□□□□ 0.34
TOP3B-214ENST00000457270 DCTPP1Q9H773 170 aa17.16■□□□□ 0.34
TOP3B-214ENST00000457270 BCL2L12Q9HB09 334 aa17.16■□□□□ 0.34
TOP3B-214ENST00000457270 UHRF1BP1LA0JNW5 1464 aa17.15■□□□□ 0.34
TOP3B-214ENST00000457270 ZNF771Q7L3S4 317 aaPredicted RBP17.15■□□□□ 0.34
TOP3B-214ENST00000457270 SPAG9O60271 1321 aaKnown RBP17.15■□□□□ 0.34
TOP3B-214ENST00000457270 REC8O95072 547 aa17.14■□□□□ 0.33
TOP3B-214ENST00000457270 CHAMP1Q96JM3 812 aa17.14■□□□□ 0.33
TOP3B-214ENST00000457270 PDCL2Q8N4E4 241 aa17.14■□□□□ 0.33
TOP3B-214ENST00000457270 TRAK1Q9UPV9 953 aa17.14■□□□□ 0.33
TOP3B-214ENST00000457270 ADGRB3O60242 1522 aa17.14■□□□□ 0.33
TOP3B-214ENST00000457270 MCM2P49736 904 aa17.13■□□□□ 0.33
TOP3B-214ENST00000457270 ANKRD7Q92527 254 aa17.13■□□□□ 0.33
TOP3B-214ENST00000457270 KNDC1Q76NI1 1749 aa17.13■□□□□ 0.33
TOP3B-214ENST00000457270 FANCAO15360 1455 aa17.13■□□□□ 0.33
TOP3B-214ENST00000457270 FAM177BA6PVY3 158 aa17.13■□□□□ 0.33
TOP3B-214ENST00000457270 VAMP4O75379 141 aa17.13■□□□□ 0.33
TOP3B-214ENST00000457270 KLHL34Q8N239 644 aa17.13■□□□□ 0.33
TOP3B-214ENST00000457270 C14orf93Q9H972 538 aaKnown RBP17.13■□□□□ 0.33
TOP3B-214ENST00000457270 CDC42BPGQ6DT37 1551 aa17.12■□□□□ 0.33
TOP3B-214ENST00000457270 ANKRD26Q9UPS8 1709 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms