RNA–Protein interactions for RNA: ENST00000455656.1

TMEM56-202, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-202ENST00000455656 KRT27Q7Z3Y8 459 aa16.61■□□□□ 0.25
TMEM56-202ENST00000455656 CRB1P82279 1406 aa16.61■□□□□ 0.25
TMEM56-202ENST00000455656 BARGINQ6ZT62 677 aa16.6■□□□□ 0.25
TMEM56-202ENST00000455656 LRRC37A3O60309 1634 aa16.59■□□□□ 0.25
TMEM56-202ENST00000455656 TNS1Q9HBL0 1735 aaKnown RBP16.59■□□□□ 0.25
TMEM56-202ENST00000455656 SOX12O15370 315 aa16.59■□□□□ 0.25
TMEM56-202ENST00000455656 EVA1CP58658 441 aa16.59■□□□□ 0.25
TMEM56-202ENST00000455656 ZBTB7CA1YPR0 619 aa16.58■□□□□ 0.24
TMEM56-202ENST00000455656 HSPA5P11021 654 aaKnown RBP16.58■□□□□ 0.24
TMEM56-202ENST00000455656 BLMP54132 1417 aaPredicted RBP16.58■□□□□ 0.24
TMEM56-202ENST00000455656 RGPD1P0DJD0 1748 aa16.57■□□□□ 0.24
TMEM56-202ENST00000455656 PEAK1Q9H792 1746 aa16.57■□□□□ 0.24
TMEM56-202ENST00000455656 WDR17Q8IZU2 1322 aa16.57■□□□□ 0.24
TMEM56-202ENST00000455656 CDCA8Q53HL2 280 aa16.57■□□□□ 0.24
TMEM56-202ENST00000455656 USP35Q9P2H5 1018 aa16.57■□□□□ 0.24
TMEM56-202ENST00000455656 EIF4G2P78344 907 aaKnown RBP eCLIP16.56■□□□□ 0.24
TMEM56-202ENST00000455656 TCP11L2Q8N4U5 519 aa16.56■□□□□ 0.24
TMEM56-202ENST00000455656 CARD14Q9BXL6 1004 aa16.56■□□□□ 0.24
TMEM56-202ENST00000455656 THRAP3Q9Y2W1 955 aaKnown RBP16.56■□□□□ 0.24
TMEM56-202ENST00000455656 A0A0G2JS52 829 aa16.55■□□□□ 0.24
TMEM56-202ENST00000455656 MYT1Q01538 1121 aa16.55■□□□□ 0.24
TMEM56-202ENST00000455656 FAM182BQ5T319 152 aa16.55■□□□□ 0.24
TMEM56-202ENST00000455656 CCDC125Q86Z20 511 aa16.55■□□□□ 0.24
TMEM56-202ENST00000455656 DISP2A7MBM2 1401 aa16.54■□□□□ 0.24
TMEM56-202ENST00000455656 FYB1O15117 783 aa16.54■□□□□ 0.24
TMEM56-202ENST00000455656 FAM208AQ9UK61 1670 aaKnown RBP16.53■□□□□ 0.24
TMEM56-202ENST00000455656 SBF2Q86WG5 1849 aa16.53■□□□□ 0.24
TMEM56-202ENST00000455656 RGPD2P0DJD1 1756 aa16.53■□□□□ 0.24
TMEM56-202ENST00000455656 ANKRD26Q9UPS8 1709 aa16.53■□□□□ 0.24
TMEM56-202ENST00000455656 NSD3Q9BZ95 1437 aa16.53■□□□□ 0.24
TMEM56-202ENST00000455656 ERBB3P21860 1342 aa16.52■□□□□ 0.24
TMEM56-202ENST00000455656 C11orf95C9JLR9 678 aaPredicted RBP16.52■□□□□ 0.24
TMEM56-202ENST00000455656 FBLN1P23142 703 aa16.52■□□□□ 0.24
TMEM56-202ENST00000455656 TOM1L2Q6ZVM7 507 aa16.51■□□□□ 0.23
TMEM56-202ENST00000455656 CARD10Q9BWT7 1032 aa16.51■□□□□ 0.23
TMEM56-202ENST00000455656 GGNBP2Q9H3C7 697 aa16.51■□□□□ 0.23
TMEM56-202ENST00000455656 MAP3K19Q56UN5 1328 aa16.5■□□□□ 0.23
TMEM56-202ENST00000455656 COG3Q96JB2 828 aa16.5■□□□□ 0.23
TMEM56-202ENST00000455656 DEFB132Q7Z7B7 95 aa16.49■□□□□ 0.23
TMEM56-202ENST00000455656 IP6K1Q92551 441 aa16.48■□□□□ 0.23
TMEM56-202ENST00000455656 CCDC7Q96M83 1385 aa16.48■□□□□ 0.23
TMEM56-202ENST00000455656 ANKRD24Q8TF21 1146 aa16.47■□□□□ 0.23
TMEM56-202ENST00000455656 HOXC9P31274 260 aa16.46■□□□□ 0.23
TMEM56-202ENST00000455656 MAP2P11137 1827 aaKnown RBP16.46■□□□□ 0.23
TMEM56-202ENST00000455656 RTL1A6NKG5 1358 aa16.46■□□□□ 0.23
TMEM56-202ENST00000455656 SHANK3Q9BYB0 1731 aa16.45■□□□□ 0.22
TMEM56-202ENST00000455656 CSB-PGBD3P0DP91 1061 aa16.45■□□□□ 0.22
TMEM56-202ENST00000455656 FAM196AQ6ZSG2 479 aa16.45■□□□□ 0.22
TMEM56-202ENST00000455656 RREB1Q92766 1687 aa16.45■□□□□ 0.22
TMEM56-202ENST00000455656 PDE3BQ13370 1112 aa16.44■□□□□ 0.22
TMEM56-202ENST00000455656 RRS1Q15050 365 aaKnown RBP16.44■□□□□ 0.22
TMEM56-202ENST00000455656 OVOS2A0A0G2JMS6 1433 aa16.44■□□□□ 0.22
TMEM56-202ENST00000455656 TNS2Q63HR2 1409 aa16.44■□□□□ 0.22
TMEM56-202ENST00000455656 DDB1Q16531 1140 aa16.43■□□□□ 0.22
TMEM56-202ENST00000455656 CDCA7Q9BWT1 371 aaPredicted RBP16.43■□□□□ 0.22
TMEM56-202ENST00000455656 BCL9O00512 1426 aa16.43■□□□□ 0.22
TMEM56-202ENST00000455656 RGPD3A6NKT7 1758 aaPredicted RBP16.42■□□□□ 0.22
TMEM56-202ENST00000455656 RGPD4Q7Z3J3 1758 aa16.42■□□□□ 0.22
TMEM56-202ENST00000455656 TRIM37O94972 964 aa16.42■□□□□ 0.22
TMEM56-202ENST00000455656 MARCH10Q8NA82 808 aaPredicted RBP16.42■□□□□ 0.22
TMEM56-202ENST00000455656 POLR3GLQ9BT43 218 aa16.42■□□□□ 0.22
TMEM56-202ENST00000455656 KIF7Q2M1P5 1343 aa16.42■□□□□ 0.22
TMEM56-202ENST00000455656 NUP188Q5SRE5 1749 aa16.42■□□□□ 0.22
TMEM56-202ENST00000455656 SF3B2Q13435 895 aaKnown RBP16.41■□□□□ 0.22
TMEM56-202ENST00000455656 NLRP2Q9NX02 1062 aa16.41■□□□□ 0.22
TMEM56-202ENST00000455656 KIF24Q5T7B8 1368 aa16.4■□□□□ 0.22
TMEM56-202ENST00000455656 BAG6P46379 1132 aa16.4■□□□□ 0.22
TMEM56-202ENST00000455656 PANK3Q9H999 370 aa16.4■□□□□ 0.22
TMEM56-202ENST00000455656 CGNL1Q0VF96 1302 aa16.4■□□□□ 0.22
TMEM56-202ENST00000455656 INSRP06213 1382 aa16.39■□□□□ 0.21
TMEM56-202ENST00000455656 AMPHP49418 695 aa16.39■□□□□ 0.21
TMEM56-202ENST00000455656 EN1Q05925 392 aaPredicted RBP16.39■□□□□ 0.21
TMEM56-202ENST00000455656 LTV1Q96GA3 475 aaPredicted RBP16.39■□□□□ 0.21
TMEM56-202ENST00000455656 NHSQ6T4R5 1651 aa16.39■□□□□ 0.21
TMEM56-202ENST00000455656 FLT4P35916 1363 aa16.38■□□□□ 0.21
TMEM56-202ENST00000455656 IL2RBP14784 551 aa16.38■□□□□ 0.21
TMEM56-202ENST00000455656 PTF1AQ7RTS3 328 aa16.38■□□□□ 0.21
TMEM56-202ENST00000455656 CAMKK2Q96RR4 588 aa16.38■□□□□ 0.21
TMEM56-202ENST00000455656 EMILIN1Q9Y6C2 1016 aa16.38■□□□□ 0.21
TMEM56-202ENST00000455656 MEGF6O75095 1541 aa16.37■□□□□ 0.21
TMEM56-202ENST00000455656 HSP90AB2PQ58FF8 381 aa16.37■□□□□ 0.21
TMEM56-202ENST00000455656 NCAPD2Q15021 1401 aa16.36■□□□□ 0.21
TMEM56-202ENST00000455656 EXOC5O00471 708 aa16.36■□□□□ 0.21
TMEM56-202ENST00000455656 EZH2Q15910 746 aaKnown RBP16.36■□□□□ 0.21
TMEM56-202ENST00000455656 NBPF6Q5VWK0 638 aa16.36■□□□□ 0.21
TMEM56-202ENST00000455656 NBPF4Q96M43 638 aa16.36■□□□□ 0.21
TMEM56-202ENST00000455656 SMG6Q86US8 1419 aaKnown RBP16.35■□□□□ 0.21
TMEM56-202ENST00000455656 APBA3O96018 575 aa16.34■□□□□ 0.21
TMEM56-202ENST00000455656 POLKQ9UBT6 870 aa16.34■□□□□ 0.21
TMEM56-202ENST00000455656 NSD2O96028 1365 aa16.34■□□□□ 0.21
TMEM56-202ENST00000455656 PARD3Q8TEW0 1356 aa16.34■□□□□ 0.21
TMEM56-202ENST00000455656 PKD1L3Q7Z443 1732 aa16.33■□□□□ 0.21
TMEM56-202ENST00000455656 BTAF1O14981 1849 aa16.33■□□□□ 0.21
TMEM56-202ENST00000455656 WASHC2AQ641Q2 1341 aa16.33■□□□□ 0.2
TMEM56-202ENST00000455656 DOT1LQ8TEK3 1739 aa16.33■□□□□ 0.2
TMEM56-202ENST00000455656 PER1O15534 1290 aaPredicted RBP16.32■□□□□ 0.2
TMEM56-202ENST00000455656 AMER1Q5JTC6 1135 aaPredicted RBP16.32■□□□□ 0.2
TMEM56-202ENST00000455656 USHBP1Q8N6Y0 703 aa16.31■□□□□ 0.2
TMEM56-202ENST00000455656 BCL11BQ9C0K0 894 aaPredicted RBP16.31■□□□□ 0.2
TMEM56-202ENST00000455656 PLSCR1O15162 318 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms