RNA–Protein interactions for RNA: ENST00000451349.1

SSXP4-201, Transcript of SSX family pseudogene 4, humanhuman

BASIC

Gene SSXP4, Length 245 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP4-201ENST00000451349 SHROOM4Q9ULL8 1493 aa5.39□□□□□ -1.55
SSXP4-201ENST00000451349 BTBD11A6QL63 1104 aa5.39□□□□□ -1.55
SSXP4-201ENST00000451349 PROCP04070 461 aa5.39□□□□□ -1.55
SSXP4-201ENST00000451349 CCNYL3P0C7X3 344 aa5.39□□□□□ -1.55
SSXP4-201ENST00000451349 BRPF1P55201 1214 aaPredicted RBP5.39□□□□□ -1.55
SSXP4-201ENST00000451349 MTMR2Q13614 643 aa5.39□□□□□ -1.55
SSXP4-201ENST00000451349 LCE3BQ5TA77 95 aa5.39□□□□□ -1.55
SSXP4-201ENST00000451349 MYSM1Q5VVJ2 828 aa5.39□□□□□ -1.55
SSXP4-201ENST00000451349 PTCRAQ6ISU1 281 aaPredicted RBP5.39□□□□□ -1.55
SSXP4-201ENST00000451349 RETREG3Q86VR2 466 aa5.39□□□□□ -1.55
SSXP4-201ENST00000451349 SYMPKQ92797 1274 aaKnown RBP5.39□□□□□ -1.55
SSXP4-201ENST00000451349 PCDHGC3Q9UN70 934 aa5.39□□□□□ -1.55
SSXP4-201ENST00000451349 NUTM2BA6NNL0 878 aaPredicted RBP5.38□□□□□ -1.55
SSXP4-201ENST00000451349 NUTM2EB1AL46 878 aaPredicted RBP5.38□□□□□ -1.55
SSXP4-201ENST00000451349 ZIC2O95409 532 aaPredicted RBP5.38□□□□□ -1.55
SSXP4-201ENST00000451349 CLK2P49760 499 aaKnown RBP5.38□□□□□ -1.55
SSXP4-201ENST00000451349 CSPP1Q1MSJ5 1256 aa5.38□□□□□ -1.55
SSXP4-201ENST00000451349 RNFT1Q5M7Z0 435 aa5.38□□□□□ -1.55
SSXP4-201ENST00000451349 NUTM2DQ5VT03 806 aaPredicted RBP5.38□□□□□ -1.55
SSXP4-201ENST00000451349 PRPF38BQ5VTL8 546 aaKnown RBP5.38□□□□□ -1.55
SSXP4-201ENST00000451349 PODNQ7Z5L7 613 aa5.38□□□□□ -1.55
SSXP4-201ENST00000451349 NUTM2AQ8IVF1 878 aaPredicted RBP5.38□□□□□ -1.55
SSXP4-201ENST00000451349 FAM174AQ8TBP5 190 aa5.38□□□□□ -1.55
SSXP4-201ENST00000451349 WHAMMQ8TF30 809 aa5.38□□□□□ -1.55
SSXP4-201ENST00000451349 UNC93B1Q9H1C4 597 aa5.38□□□□□ -1.55
SSXP4-201ENST00000451349 ZBTB3Q9H5J0 574 aa5.38□□□□□ -1.55
SSXP4-201ENST00000451349 POLR3EQ9NVU0 708 aa5.38□□□□□ -1.55
SSXP4-201ENST00000451349 DNMT3LQ9UJW3 386 aa5.38□□□□□ -1.55
SSXP4-201ENST00000451349 CDK11BP21127 795 aaKnown RBP5.37□□□□□ -1.55
SSXP4-201ENST00000451349 NR5A1Q13285 461 aa5.37□□□□□ -1.55
SSXP4-201ENST00000451349 SKIV2LQ15477 1246 aaKnown RBP5.37□□□□□ -1.55
SSXP4-201ENST00000451349 SH3D19Q5HYK7 790 aa5.37□□□□□ -1.55
SSXP4-201ENST00000451349 MEIOBQ8N635 442 aa5.37□□□□□ -1.55
SSXP4-201ENST00000451349 BEND7Q8N7W2 519 aaPredicted RBP5.37□□□□□ -1.55
SSXP4-201ENST00000451349 ZNF511Q8NB15 262 aa5.37□□□□□ -1.55
SSXP4-201ENST00000451349 IL27Q8NEV9 243 aa5.37□□□□□ -1.55
SSXP4-201ENST00000451349 CDK11AQ9UQ88 783 aaPredicted RBP5.37□□□□□ -1.55
SSXP4-201ENST00000451349 PCDHB15Q9Y5E8 787 aa5.37□□□□□ -1.55
SSXP4-201ENST00000451349 LOC105371045A0A1W2PR82 267 aa5.36□□□□□ -1.55
SSXP4-201ENST00000451349 PDIA4P13667 645 aaKnown RBP5.36□□□□□ -1.55
SSXP4-201ENST00000451349 PTSQ03393 145 aa5.36□□□□□ -1.55
SSXP4-201ENST00000451349 PTPRNQ16849 979 aa5.36□□□□□ -1.55
SSXP4-201ENST00000451349 TUSC1Q2TAM9 212 aa5.36□□□□□ -1.55
SSXP4-201ENST00000451349 SV2AQ7L0J3 742 aa5.36□□□□□ -1.55
SSXP4-201ENST00000451349 PRR7Q8TB68 274 aa5.36□□□□□ -1.55
SSXP4-201ENST00000451349 ITPKCQ96DU7 683 aa5.36□□□□□ -1.55
SSXP4-201ENST00000451349 CDK15Q96Q40 435 aa5.36□□□□□ -1.55
SSXP4-201ENST00000451349 TSEN34Q9BSV6 310 aaKnown RBP5.36□□□□□ -1.55
SSXP4-201ENST00000451349 ZMYND15Q9H091 742 aa5.36□□□□□ -1.55
SSXP4-201ENST00000451349 LIMD1Q9UGP4 676 aa5.36□□□□□ -1.55
SSXP4-201ENST00000451349 TTLL8A6PVC2 850 aa5.35□□□□□ -1.55
SSXP4-201ENST00000451349 ADAMTS2O95450 1211 aa5.35□□□□□ -1.55
SSXP4-201ENST00000451349 SRSF11Q05519 484 aaKnown RBP5.35□□□□□ -1.55
SSXP4-201ENST00000451349 LILRB3O75022 631 aa5.34□□□□□ -1.55
SSXP4-201ENST00000451349 HSP90B1P14625 803 aaKnown RBP5.34□□□□□ -1.55
SSXP4-201ENST00000451349 LINC01559Q495D7 138 aa5.34□□□□□ -1.55
SSXP4-201ENST00000451349 DESI1Q6ICB0 168 aa5.34□□□□□ -1.55
SSXP4-201ENST00000451349 CCDC155Q8N6L0 562 aa5.34□□□□□ -1.55
SSXP4-201ENST00000451349 CABLES1Q8TDN4 633 aa5.34□□□□□ -1.55
SSXP4-201ENST00000451349 BAP1Q92560 729 aa5.34□□□□□ -1.55
SSXP4-201ENST00000451349 PCMTD1Q96MG8 357 aaPredicted RBP5.34□□□□□ -1.55
SSXP4-201ENST00000451349 ZFAND3Q9H8U3 227 aa5.34□□□□□ -1.55
SSXP4-201ENST00000451349 EVA1BQ9NVM1 165 aa5.34□□□□□ -1.55
SSXP4-201ENST00000451349 ITGB2P05107 769 aa5.33□□□□□ -1.56
SSXP4-201ENST00000451349 ITGA6P23229 1130 aa5.33□□□□□ -1.56
SSXP4-201ENST00000451349 BAG6P46379 1132 aa5.33□□□□□ -1.56
SSXP4-201ENST00000451349 QPCTQ16769 361 aa5.33□□□□□ -1.56
SSXP4-201ENST00000451349 ALYREFQ86V81 257 aaKnown RBP5.33□□□□□ -1.56
SSXP4-201ENST00000451349 HELBQ8NG08 1087 aaPredicted RBP5.33□□□□□ -1.56
SSXP4-201ENST00000451349 TSC1Q92574 1164 aa5.33□□□□□ -1.56
SSXP4-201ENST00000451349 ARID3AQ99856 593 aa5.33□□□□□ -1.56
SSXP4-201ENST00000451349 GOPCQ9HD26 462 aa5.33□□□□□ -1.56
SSXP4-201ENST00000451349 KCNH2Q12809 1159 aa5.32□□□□□ -1.56
SSXP4-201ENST00000451349 LYPD4Q6UWN0 246 aa5.32□□□□□ -1.56
SSXP4-201ENST00000451349 PROCA1Q8NCQ7 364 aaPredicted RBP5.32□□□□□ -1.56
SSXP4-201ENST00000451349 KRTAP4-12Q9BQ66 201 aa5.32□□□□□ -1.56
SSXP4-201ENST00000451349 CDC14CA4D256 554 aa5.31□□□□□ -1.56
SSXP4-201ENST00000451349 CFAP99D6REC4 459 aa5.31□□□□□ -1.56
SSXP4-201ENST00000451349 CELA2BP08218 269 aaPredicted RBP5.31□□□□□ -1.56
SSXP4-201ENST00000451349 RTL5Q5HYW3 569 aaPredicted RBP5.31□□□□□ -1.56
SSXP4-201ENST00000451349 LYPD8Q6UX82 237 aa5.31□□□□□ -1.56
SSXP4-201ENST00000451349 SLC35F4A4IF30 521 aa5.3□□□□□ -1.56
SSXP4-201ENST00000451349 CTHP32929 405 aa5.3□□□□□ -1.56
SSXP4-201ENST00000451349 VWA5B2Q8N398 1253 aa5.3□□□□□ -1.56
SSXP4-201ENST00000451349 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.3□□□□□ -1.56
SSXP4-201ENST00000451349 ARID5BQ14865 1188 aa5.29□□□□□ -1.56
SSXP4-201ENST00000451349 PPP2R2DQ66LE6 453 aa5.29□□□□□ -1.56
SSXP4-201ENST00000451349 LRRC4BQ9NT99 713 aa5.29□□□□□ -1.56
SSXP4-201ENST00000451349 NR3C2P08235 984 aa5.28□□□□□ -1.56
SSXP4-201ENST00000451349 EMILIN1Q9Y6C2 1016 aa5.28□□□□□ -1.56
SSXP4-201ENST00000451349 CNTNAP5Q8WYK1 1306 aa5.27□□□□□ -1.57
SSXP4-201ENST00000451349 AP1G2O75843 785 aa5.27□□□□□ -1.57
SSXP4-201ENST00000451349 TMEM259Q4ZIN3 620 aa5.27□□□□□ -1.57
SSXP4-201ENST00000451349 NEDD1Q8NHV4 660 aa5.27□□□□□ -1.57
SSXP4-201ENST00000451349 PER1O15534 1290 aaPredicted RBP5.26□□□□□ -1.57
SSXP4-201ENST00000451349 FURINP09958 794 aa5.26□□□□□ -1.57
SSXP4-201ENST00000451349 RFC5P40937 340 aa5.26□□□□□ -1.57
SSXP4-201ENST00000451349 CTDSPL2Q05D32 466 aa5.26□□□□□ -1.57
SSXP4-201ENST00000451349 ARMC2Q8NEN0 867 aa5.26□□□□□ -1.57
SSXP4-201ENST00000451349 SPINT1O43278 529 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms