RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 SOS2Q07890 1332 aaPredicted RBP12.67□□□□□ -0.38
RFC4-210ENST00000449502 RGPD8O14715 1765 aaPredicted RBP12.67□□□□□ -0.38
RFC4-210ENST00000449502 E9PSI1 815 aa12.67□□□□□ -0.38
RFC4-210ENST00000449502 TMPOP42166 694 aaKnown RBP12.67□□□□□ -0.38
RFC4-210ENST00000449502 RIPK4P57078 832 aa12.67□□□□□ -0.38
RFC4-210ENST00000449502 LMOD3Q0VAK6 560 aa12.67□□□□□ -0.38
RFC4-210ENST00000449502 CCDC27Q2M243 656 aa12.67□□□□□ -0.38
RFC4-210ENST00000449502 PIK3C2AO00443 1686 aa12.67□□□□□ -0.38
RFC4-210ENST00000449502 ZC3H6P61129 1189 aaKnown RBP12.66□□□□□ -0.38
RFC4-210ENST00000449502 CALD1Q05682 793 aaKnown RBP12.66□□□□□ -0.38
RFC4-210ENST00000449502 ARHGEF25Q86VW2 580 aa12.66□□□□□ -0.38
RFC4-210ENST00000449502 WDR63Q8IWG1 891 aa12.66□□□□□ -0.38
RFC4-210ENST00000449502 WWC1Q8IX03 1113 aa12.66□□□□□ -0.38
RFC4-210ENST00000449502 NFE2L2Q16236 605 aa12.65□□□□□ -0.38
RFC4-210ENST00000449502 CDCA7LQ96GN5 454 aa12.65□□□□□ -0.38
RFC4-210ENST00000449502 SUPT16HQ9Y5B9 1047 aaKnown RBP12.65□□□□□ -0.38
RFC4-210ENST00000449502 CSB-PGBD3P0DP91 1061 aa12.64□□□□□ -0.39
RFC4-210ENST00000449502 CABLES1Q8TDN4 633 aa12.64□□□□□ -0.39
RFC4-210ENST00000449502 LRRC59Q96AG4 307 aaKnown RBP12.64□□□□□ -0.39
RFC4-210ENST00000449502 EYA1Q99502 592 aa12.64□□□□□ -0.39
RFC4-210ENST00000449502 MYH16Q9H6N6 1097 aa12.64□□□□□ -0.39
RFC4-210ENST00000449502 PXDNQ92626 1479 aa12.64□□□□□ -0.39
RFC4-210ENST00000449502 ZNF521Q96K83 1311 aa12.63□□□□□ -0.39
RFC4-210ENST00000449502 PIP4K2BP78356 416 aa12.63□□□□□ -0.39
RFC4-210ENST00000449502 SLFN5Q08AF3 891 aa12.63□□□□□ -0.39
RFC4-210ENST00000449502 AEBP1Q8IUX7 1158 aa12.63□□□□□ -0.39
RFC4-210ENST00000449502 IGSF1Q8N6C5 1336 aa12.62□□□□□ -0.39
RFC4-210ENST00000449502 SHPRHQ149N8 1683 aa12.62□□□□□ -0.39
RFC4-210ENST00000449502 UBAP1LF5GYI3 381 aa12.62□□□□□ -0.39
RFC4-210ENST00000449502 GAS2L2Q8NHY3 880 aa12.62□□□□□ -0.39
RFC4-210ENST00000449502 ANKRD24Q8TF21 1146 aa12.62□□□□□ -0.39
RFC4-210ENST00000449502 RCAN3Q9UKA8 241 aa12.62□□□□□ -0.39
RFC4-210ENST00000449502 LTBP4Q8N2S1 1624 aa12.62□□□□□ -0.39
RFC4-210ENST00000449502 SLIT3O75094 1523 aa12.62□□□□□ -0.39
RFC4-210ENST00000449502 PHACTR3Q96KR7 559 aa12.61□□□□□ -0.39
RFC4-210ENST00000449502 PRDM11Q9NQV5 511 aa12.61□□□□□ -0.39
RFC4-210ENST00000449502 NFAT5O94916 1531 aa12.61□□□□□ -0.39
RFC4-210ENST00000449502 IQSEC2Q5JU85 1478 aa12.6□□□□□ -0.39
RFC4-210ENST00000449502 RTF1Q92541 710 aaKnown RBP12.6□□□□□ -0.39
RFC4-210ENST00000449502 FKBP8Q14318 412 aa12.59□□□□□ -0.39
RFC4-210ENST00000449502 DUSP27Q5VZP5 1158 aa12.59□□□□□ -0.39
RFC4-210ENST00000449502 PHF23Q9BUL5 403 aaPredicted RBP12.59□□□□□ -0.39
RFC4-210ENST00000449502 NLRP2Q9NX02 1062 aa12.59□□□□□ -0.39
RFC4-210ENST00000449502 TRIM35Q9UPQ4 493 aa12.59□□□□□ -0.39
RFC4-210ENST00000449502 IL16Q14005 1332 aa12.59□□□□□ -0.39
RFC4-210ENST00000449502 USP54Q70EL1 1684 aa12.58□□□□□ -0.4
RFC4-210ENST00000449502 EVA1CP58658 441 aa12.58□□□□□ -0.4
RFC4-210ENST00000449502 CHRNA2Q15822 529 aa12.58□□□□□ -0.4
RFC4-210ENST00000449502 NBPF6Q5VWK0 638 aa12.58□□□□□ -0.4
RFC4-210ENST00000449502 USHBP1Q8N6Y0 703 aa12.58□□□□□ -0.4
RFC4-210ENST00000449502 NBPF4Q96M43 638 aa12.58□□□□□ -0.4
RFC4-210ENST00000449502 TRPM3Q9HCF6 1732 aaPredicted RBP12.58□□□□□ -0.4
RFC4-210ENST00000449502 LAS1LQ9Y4W2 734 aaKnown RBP12.58□□□□□ -0.4
RFC4-210ENST00000449502 CPDO75976 1380 aa12.57□□□□□ -0.4
RFC4-210ENST00000449502 KIAA0232Q92628 1395 aa12.57□□□□□ -0.4
RFC4-210ENST00000449502 PLEKHO1Q53GL0 409 aaPredicted RBP12.57□□□□□ -0.4
RFC4-210ENST00000449502 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.57□□□□□ -0.4
RFC4-210ENST00000449502 MAP2P11137 1827 aaKnown RBP12.57□□□□□ -0.4
RFC4-210ENST00000449502 XIRP1Q702N8 1843 aaKnown RBP12.57□□□□□ -0.4
RFC4-210ENST00000449502 KDRP35968 1356 aa12.56□□□□□ -0.4
RFC4-210ENST00000449502 GNAI1P63096 354 aa12.56□□□□□ -0.4
RFC4-210ENST00000449502 TRMT2AQ8IZ69 625 aaKnown RBP12.56□□□□□ -0.4
RFC4-210ENST00000449502 RAPGEF4Q8WZA2 1011 aa12.56□□□□□ -0.4
RFC4-210ENST00000449502 AXIN2Q9Y2T1 843 aa12.56□□□□□ -0.4
RFC4-210ENST00000449502 PEAK1Q9H792 1746 aa12.56□□□□□ -0.4
RFC4-210ENST00000449502 ERBB3P21860 1342 aa12.56□□□□□ -0.4
RFC4-210ENST00000449502 HTATSF1O43719 755 aaKnown RBP12.55□□□□□ -0.4
RFC4-210ENST00000449502 MTHFSDQ2M296 383 aaKnown RBP12.55□□□□□ -0.4
RFC4-210ENST00000449502 AMOTQ4VCS5 1084 aa12.55□□□□□ -0.4
RFC4-210ENST00000449502 CERKQ8TCT0 537 aa12.55□□□□□ -0.4
RFC4-210ENST00000449502 SPINK5Q9NQ38 1064 aaPredicted RBP12.55□□□□□ -0.4
RFC4-210ENST00000449502 MED1Q15648 1581 aaPredicted RBP12.55□□□□□ -0.4
RFC4-210ENST00000449502 TATP17735 454 aaPredicted RBP12.54□□□□□ -0.4
RFC4-210ENST00000449502 IFT57Q9NWB7 429 aa12.54□□□□□ -0.4
RFC4-210ENST00000449502 ALS2Q96Q42 1657 aa12.54□□□□□ -0.4
RFC4-210ENST00000449502 GNAT3A8MTJ3 354 aa12.53□□□□□ -0.4
RFC4-210ENST00000449502 RRP1P56182 461 aaKnown RBP12.53□□□□□ -0.4
RFC4-210ENST00000449502 C1orf141Q5JVX7 400 aa12.53□□□□□ -0.4
RFC4-210ENST00000449502 TOM1L2Q6ZVM7 507 aa12.53□□□□□ -0.4
RFC4-210ENST00000449502 THUMPD2Q9BTF0 503 aaKnown RBP12.53□□□□□ -0.4
RFC4-210ENST00000449502 CT47B1P0C2W7 299 aaPredicted RBP12.52□□□□□ -0.41
RFC4-210ENST00000449502 CANXP27824 592 aaKnown RBP12.52□□□□□ -0.41
RFC4-210ENST00000449502 IRX6P78412 446 aaPredicted RBP12.52□□□□□ -0.41
RFC4-210ENST00000449502 ERICH6BQ5W0A0 696 aa12.52□□□□□ -0.41
RFC4-210ENST00000449502 ZNF530Q6P9A1 599 aaPredicted RBP12.52□□□□□ -0.41
RFC4-210ENST00000449502 TSR2Q969E8 191 aaKnown RBP12.52□□□□□ -0.41
RFC4-210ENST00000449502 STRN4Q9NRL3 753 aa12.52□□□□□ -0.41
RFC4-210ENST00000449502 FANCIQ9NVI1 1328 aa12.52□□□□□ -0.41
RFC4-210ENST00000449502 FAM83GA6ND36 823 aa12.51□□□□□ -0.41
RFC4-210ENST00000449502 DCTN1Q14203 1278 aa12.51□□□□□ -0.41
RFC4-210ENST00000449502 MCM10Q7L590 875 aa12.51□□□□□ -0.41
RFC4-210ENST00000449502 CFAP44Q96MT7 982 aa12.51□□□□□ -0.41
RFC4-210ENST00000449502 SPG7Q9UQ90 795 aa12.51□□□□□ -0.41
RFC4-210ENST00000449502 AHDC1Q5TGY3 1603 aaPredicted RBP12.51□□□□□ -0.41
RFC4-210ENST00000449502 MARF1Q9Y4F3 1742 aaKnown RBP12.51□□□□□ -0.41
RFC4-210ENST00000449502 NUTM2BA6NNL0 878 aaPredicted RBP12.5□□□□□ -0.41
RFC4-210ENST00000449502 NUTM2EB1AL46 878 aaPredicted RBP12.5□□□□□ -0.41
RFC4-210ENST00000449502 EXOSC9Q06265 439 aaKnown RBP12.5□□□□□ -0.41
RFC4-210ENST00000449502 AKAP4Q5JQC9 854 aa12.5□□□□□ -0.41
RFC4-210ENST00000449502 NUTM2AQ8IVF1 878 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms