RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 CREBZFQ9NS37 354 aa11.02□□□□□ -0.65
RBM39-218ENST00000449489 EIF3AQ14152 1382 aaKnown RBP11.02□□□□□ -0.65
RBM39-218ENST00000449489 PLCB2Q00722 1185 aa11.01□□□□□ -0.65
RBM39-218ENST00000449489 THRAP3Q9Y2W1 955 aaKnown RBP11.01□□□□□ -0.65
RBM39-218ENST00000449489 CASZ1Q86V15 1759 aa11□□□□□ -0.65
RBM39-218ENST00000449489 DLC1Q96QB1 1528 aa11□□□□□ -0.65
RBM39-218ENST00000449489 PRAM1Q96QH2 718 aa11□□□□□ -0.65
RBM39-218ENST00000449489 KIAA0232Q92628 1395 aa11□□□□□ -0.65
RBM39-218ENST00000449489 RGL3Q3MIN7 710 aa10.99□□□□□ -0.65
RBM39-218ENST00000449489 FAM212AQ96EL1 285 aa10.99□□□□□ -0.65
RBM39-218ENST00000449489 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.99□□□□□ -0.65
RBM39-218ENST00000449489 TAOK2Q9UL54 1235 aa10.99□□□□□ -0.65
RBM39-218ENST00000449489 PTGER2P43116 358 aa10.98□□□□□ -0.65
RBM39-218ENST00000449489 NUBP1P53384 320 aa10.98□□□□□ -0.65
RBM39-218ENST00000449489 TCP11L2Q8N4U5 519 aa10.98□□□□□ -0.65
RBM39-218ENST00000449489 SSH2Q76I76 1423 aa10.98□□□□□ -0.65
RBM39-218ENST00000449489 NRKQ7Z2Y5 1582 aa10.98□□□□□ -0.65
RBM39-218ENST00000449489 SYT17Q9BSW7 474 aa10.97□□□□□ -0.65
RBM39-218ENST00000449489 STRN4Q9NRL3 753 aa10.97□□□□□ -0.65
RBM39-218ENST00000449489 PARP4Q9UKK3 1724 aaKnown RBP10.97□□□□□ -0.65
RBM39-218ENST00000449489 SBF2Q86WG5 1849 aa10.96□□□□□ -0.65
RBM39-218ENST00000449489 TULP4Q9NRJ4 1543 aa10.96□□□□□ -0.65
RBM39-218ENST00000449489 EVA1CP58658 441 aa10.96□□□□□ -0.65
RBM39-218ENST00000449489 BBXQ8WY36 941 aaPredicted RBP10.96□□□□□ -0.65
RBM39-218ENST00000449489 POGKQ9P215 609 aa10.96□□□□□ -0.65
RBM39-218ENST00000449489 PEAK1Q9H792 1746 aa10.95□□□□□ -0.66
RBM39-218ENST00000449489 ATP7BP35670 1465 aa10.95□□□□□ -0.66
RBM39-218ENST00000449489 OVOS2A0A0G2JMS6 1433 aa10.95□□□□□ -0.66
RBM39-218ENST00000449489 OVOS2A0A0J9YW53 1432 aa10.95□□□□□ -0.66
RBM39-218ENST00000449489 OVOS2Q6IE36 1432 aa10.95□□□□□ -0.66
RBM39-218ENST00000449489 CPDO75976 1380 aa10.95□□□□□ -0.66
RBM39-218ENST00000449489 MAP3K5Q99683 1374 aa10.95□□□□□ -0.66
RBM39-218ENST00000449489 PRR36Q9H6K5 1346 aa10.95□□□□□ -0.66
RBM39-218ENST00000449489 PAK3O75914 559 aaPredicted RBP10.95□□□□□ -0.66
RBM39-218ENST00000449489 CHRNA2Q15822 529 aa10.95□□□□□ -0.66
RBM39-218ENST00000449489 DCAF8Q5TAQ9 597 aa10.95□□□□□ -0.66
RBM39-218ENST00000449489 NGDNQ8NEJ9 315 aaKnown RBP10.95□□□□□ -0.66
RBM39-218ENST00000449489 BCL11BQ9C0K0 894 aaPredicted RBP10.95□□□□□ -0.66
RBM39-218ENST00000449489 ANO8Q9HCE9 1232 aaPredicted RBP10.95□□□□□ -0.66
RBM39-218ENST00000449489 MYOM1P52179 1685 aa10.95□□□□□ -0.66
RBM39-218ENST00000449489 PHRF1Q9P1Y6 1649 aaKnown RBP10.95□□□□□ -0.66
RBM39-218ENST00000449489 BCL9O00512 1426 aa10.94□□□□□ -0.66
RBM39-218ENST00000449489 WASLO00401 505 aaPredicted RBP10.94□□□□□ -0.66
RBM39-218ENST00000449489 RGL2O15211 777 aa10.94□□□□□ -0.66
RBM39-218ENST00000449489 SAFB2Q14151 953 aaKnown RBP eCLIP10.94□□□□□ -0.66
RBM39-218ENST00000449489 CFAP70Q5T0N1 1121 aa10.94□□□□□ -0.66
RBM39-218ENST00000449489 SGIP1Q9BQI5 828 aa10.94□□□□□ -0.66
RBM39-218ENST00000449489 USP35Q9P2H5 1018 aa10.94□□□□□ -0.66
RBM39-218ENST00000449489 ZC3H6P61129 1189 aaKnown RBP10.93□□□□□ -0.66
RBM39-218ENST00000449489 LARP1Q6PKG0 1096 aaKnown RBP10.93□□□□□ -0.66
RBM39-218ENST00000449489 FHDC1Q9C0D6 1143 aaPredicted RBP10.93□□□□□ -0.66
RBM39-218ENST00000449489 MTFR1LQ9H019 292 aa10.93□□□□□ -0.66
RBM39-218ENST00000449489 LMO7Q8WWI1 1683 aa10.92□□□□□ -0.66
RBM39-218ENST00000449489 GIGYF1O75420 1035 aaPredicted RBP10.92□□□□□ -0.66
RBM39-218ENST00000449489 ZBTB7AO95365 584 aa10.92□□□□□ -0.66
RBM39-218ENST00000449489 MNX1P50219 401 aaPredicted RBP10.92□□□□□ -0.66
RBM39-218ENST00000449489 PDGFDQ9GZP0 370 aaPredicted RBP10.92□□□□□ -0.66
RBM39-218ENST00000449489 AATKQ6ZMQ8 1374 aa10.91□□□□□ -0.66
RBM39-218ENST00000449489 ITSN1Q15811 1721 aa10.91□□□□□ -0.66
RBM39-218ENST00000449489 ADGRB1O14514 1584 aa10.9□□□□□ -0.66
RBM39-218ENST00000449489 GABBR2O75899 941 aa10.9□□□□□ -0.66
RBM39-218ENST00000449489 SLC15A2Q16348 729 aa10.9□□□□□ -0.66
RBM39-218ENST00000449489 STK32BQ9NY57 414 aa10.9□□□□□ -0.66
RBM39-218ENST00000449489 POLR3AO14802 1390 aaPredicted RBP10.9□□□□□ -0.67
RBM39-218ENST00000449489 USP19O94966 1318 aa10.89□□□□□ -0.67
RBM39-218ENST00000449489 HIRIP3Q9BW71 556 aaPredicted RBP10.89□□□□□ -0.67
RBM39-218ENST00000449489 CRB1P82279 1406 aa10.89□□□□□ -0.67
RBM39-218ENST00000449489 MINK1Q8N4C8 1332 aaPredicted RBP10.88□□□□□ -0.67
RBM39-218ENST00000449489 COL5A2P05997 1499 aaPredicted RBP10.88□□□□□ -0.67
RBM39-218ENST00000449489 DDB1Q16531 1140 aa10.88□□□□□ -0.67
RBM39-218ENST00000449489 NUDT16Q96DE0 195 aaKnown RBP10.88□□□□□ -0.67
RBM39-218ENST00000449489 ARXQ96QS3 562 aa10.88□□□□□ -0.67
RBM39-218ENST00000449489 MPHOSPH9Q99550 1183 aa10.88□□□□□ -0.67
RBM39-218ENST00000449489 CDCA7Q9BWT1 371 aaPredicted RBP10.88□□□□□ -0.67
RBM39-218ENST00000449489 FARP1Q9Y4F1 1045 aaPredicted RBP10.88□□□□□ -0.67
RBM39-218ENST00000449489 PCNTO95613 3336 aa10.87□□□□□ -0.67
RBM39-218ENST00000449489 PLEKHG3A1L390 1219 aa10.87□□□□□ -0.67
RBM39-218ENST00000449489 TXNRD1Q16881 649 aa10.87□□□□□ -0.67
RBM39-218ENST00000449489 TRAK1Q9UPV9 953 aa10.87□□□□□ -0.67
RBM39-218ENST00000449489 GCP02774 474 aa10.86□□□□□ -0.67
RBM39-218ENST00000449489 CHRM1P11229 460 aaPredicted RBP10.86□□□□□ -0.67
RBM39-218ENST00000449489 STAC3Q96MF2 364 aa10.86□□□□□ -0.67
RBM39-218ENST00000449489 LRRC37A3O60309 1634 aa10.86□□□□□ -0.67
RBM39-218ENST00000449489 BRD4O60885 1362 aaPredicted RBP10.86□□□□□ -0.67
RBM39-218ENST00000449489 CD44P16070 742 aaKnown RBP10.85□□□□□ -0.67
RBM39-218ENST00000449489 GPR162Q16538 588 aa10.85□□□□□ -0.67
RBM39-218ENST00000449489 PTF1AQ7RTS3 328 aa10.85□□□□□ -0.67
RBM39-218ENST00000449489 NLRP13Q86W25 1043 aa10.85□□□□□ -0.67
RBM39-218ENST00000449489 ABTB2Q8N961 1025 aa10.85□□□□□ -0.67
RBM39-218ENST00000449489 CCDC61Q9Y6R9 512 aa10.85□□□□□ -0.67
RBM39-218ENST00000449489 ACEP12821 1306 aa10.84□□□□□ -0.67
RBM39-218ENST00000449489 NUTM2GQ5VZR2 741 aa10.84□□□□□ -0.67
RBM39-218ENST00000449489 MARCH10Q8NA82 808 aaPredicted RBP10.84□□□□□ -0.67
RBM39-218ENST00000449489 AKAP12Q02952 1782 aa10.83□□□□□ -0.68
RBM39-218ENST00000449489 RIOK3O14730 519 aaKnown RBP10.83□□□□□ -0.68
RBM39-218ENST00000449489 SLC16A10Q8TF71 515 aa10.83□□□□□ -0.68
RBM39-218ENST00000449489 SHANK3Q9BYB0 1731 aa10.83□□□□□ -0.68
RBM39-218ENST00000449489 TOPAZ1Q8N9V7 1692 aa10.82□□□□□ -0.68
RBM39-218ENST00000449489 COL24A1Q17RW2 1714 aa10.82□□□□□ -0.68
RBM39-218ENST00000449489 WNK3Q9BYP7 1800 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms