RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 INSRP06213 1382 aa19.69■□□□□ 0.74
SHANK2-210ENST00000449116 ABCC6O95255 1503 aa19.68■□□□□ 0.74
SHANK2-210ENST00000449116 HOXC9P31274 260 aa19.68■□□□□ 0.74
SHANK2-210ENST00000449116 IP6K1Q92551 441 aa19.68■□□□□ 0.74
SHANK2-210ENST00000449116 ADAMTS2O95450 1211 aa19.66■□□□□ 0.74
SHANK2-210ENST00000449116 CHRNA2Q15822 529 aa19.66■□□□□ 0.74
SHANK2-210ENST00000449116 CCDC184Q52MB2 194 aa19.66■□□□□ 0.74
SHANK2-210ENST00000449116 HSP90AB2PQ58FF8 381 aa19.66■□□□□ 0.74
SHANK2-210ENST00000449116 MRS2Q9HD23 443 aa19.66■□□□□ 0.74
SHANK2-210ENST00000449116 BLMP54132 1417 aaPredicted RBP19.66■□□□□ 0.74
SHANK2-210ENST00000449116 COL3A1P02461 1466 aaPredicted RBP19.65■□□□□ 0.74
SHANK2-210ENST00000449116 FAM83GA6ND36 823 aa19.64■□□□□ 0.73
SHANK2-210ENST00000449116 LRP6O75581 1613 aa19.64■□□□□ 0.73
SHANK2-210ENST00000449116 COL18A1P39060 1754 aa19.64■□□□□ 0.73
SHANK2-210ENST00000449116 AXIN2Q9Y2T1 843 aa19.63■□□□□ 0.73
SHANK2-210ENST00000449116 COL14A1Q05707 1796 aaKnown RBP19.62■□□□□ 0.73
SHANK2-210ENST00000449116 LMO7Q8WWI1 1683 aa19.62■□□□□ 0.73
SHANK2-210ENST00000449116 DIAPH1O60610 1272 aaKnown RBP19.62■□□□□ 0.73
SHANK2-210ENST00000449116 IL13P35225 146 aa19.6■□□□□ 0.73
SHANK2-210ENST00000449116 EIF4A2Q14240 407 aaKnown RBP19.6■□□□□ 0.73
SHANK2-210ENST00000449116 NUDCQ9Y266 331 aa19.6■□□□□ 0.73
SHANK2-210ENST00000449116 CAMTA1Q9Y6Y1 1673 aa19.59■□□□□ 0.73
SHANK2-210ENST00000449116 MEX3CQ5U5Q3 659 aaKnown RBP19.59■□□□□ 0.73
SHANK2-210ENST00000449116 ANKRD24Q8TF21 1146 aa19.59■□□□□ 0.73
SHANK2-210ENST00000449116 LTV1Q96GA3 475 aaPredicted RBP19.59■□□□□ 0.73
SHANK2-210ENST00000449116 ERBB3P21860 1342 aa19.58■□□□□ 0.73
SHANK2-210ENST00000449116 BTG4Q9NY30 223 aa19.58■□□□□ 0.72
SHANK2-210ENST00000449116 COL5A2P05997 1499 aaPredicted RBP19.58■□□□□ 0.72
SHANK2-210ENST00000449116 PNISRQ8TF01 805 aaKnown RBP19.57■□□□□ 0.72
SHANK2-210ENST00000449116 C8orf37Q96NL8 207 aa19.57■□□□□ 0.72
SHANK2-210ENST00000449116 RGPD5Q99666 1765 aa19.57■□□□□ 0.72
SHANK2-210ENST00000449116 SLIT2O94813 1529 aa19.56■□□□□ 0.72
SHANK2-210ENST00000449116 PLCH1Q4KWH8 1693 aa19.56■□□□□ 0.72
SHANK2-210ENST00000449116 WDR43Q15061 677 aaKnown RBP eCLIP19.56■□□□□ 0.72
SHANK2-210ENST00000449116 NGLY1Q96IV0 654 aa19.56■□□□□ 0.72
SHANK2-210ENST00000449116 U2SURPO15042 1029 aaKnown RBP19.55■□□□□ 0.72
SHANK2-210ENST00000449116 CSB-PGBD3P0DP91 1061 aa19.55■□□□□ 0.72
SHANK2-210ENST00000449116 NWD2Q9ULI1 1742 aa19.54■□□□□ 0.72
SHANK2-210ENST00000449116 EVA1CP58658 441 aa19.54■□□□□ 0.72
SHANK2-210ENST00000449116 FNBP4Q8N3X1 1017 aaPredicted RBP19.54■□□□□ 0.72
SHANK2-210ENST00000449116 WDR17Q8IZU2 1322 aa19.53■□□□□ 0.72
SHANK2-210ENST00000449116 U2AF1L5P0DN76 240 aaPredicted RBP19.53■□□□□ 0.72
SHANK2-210ENST00000449116 U2AF1Q01081 240 aaKnown RBP eCLIP19.53■□□□□ 0.72
SHANK2-210ENST00000449116 EYA1Q99502 592 aa19.53■□□□□ 0.72
SHANK2-210ENST00000449116 STRN4Q9NRL3 753 aa19.53■□□□□ 0.72
SHANK2-210ENST00000449116 FAM208AQ9UK61 1670 aaKnown RBP19.52■□□□□ 0.72
SHANK2-210ENST00000449116 IGSF1Q8N6C5 1336 aa19.52■□□□□ 0.72
SHANK2-210ENST00000449116 RGPD1P0DJD0 1748 aa19.52■□□□□ 0.72
SHANK2-210ENST00000449116 NRAPQ86VF7 1730 aa19.51■□□□□ 0.71
SHANK2-210ENST00000449116 NBPF6Q5VWK0 638 aa19.51■□□□□ 0.71
SHANK2-210ENST00000449116 FAM9BQ8IZU0 186 aa19.51■□□□□ 0.71
SHANK2-210ENST00000449116 NBPF4Q96M43 638 aa19.51■□□□□ 0.71
SHANK2-210ENST00000449116 LARP1Q6PKG0 1096 aaKnown RBP19.5■□□□□ 0.71
SHANK2-210ENST00000449116 TOM1L2Q6ZVM7 507 aa19.5■□□□□ 0.71
SHANK2-210ENST00000449116 UNC5CLQ8IV45 518 aa19.5■□□□□ 0.71
SHANK2-210ENST00000449116 NLRP2Q9NX02 1062 aa19.5■□□□□ 0.71
SHANK2-210ENST00000449116 ADAMTS8Q9UP79 889 aa19.5■□□□□ 0.71
SHANK2-210ENST00000449116 CRB1P82279 1406 aa19.5■□□□□ 0.71
SHANK2-210ENST00000449116 BCL9LQ86UU0 1499 aa19.49■□□□□ 0.71
SHANK2-210ENST00000449116 USP21Q9UK80 565 aa19.49■□□□□ 0.71
SHANK2-210ENST00000449116 NCAPD2Q15021 1401 aa19.49■□□□□ 0.71
SHANK2-210ENST00000449116 AFF2P51816 1311 aa19.49■□□□□ 0.71
SHANK2-210ENST00000449116 SULT6B1Q6IMI4 303 aa19.48■□□□□ 0.71
SHANK2-210ENST00000449116 CARD10Q9BWT7 1032 aa19.48■□□□□ 0.71
SHANK2-210ENST00000449116 KDRP35968 1356 aa19.47■□□□□ 0.71
SHANK2-210ENST00000449116 FCHSD2O94868 740 aa19.47■□□□□ 0.71
SHANK2-210ENST00000449116 HMOX1P09601 288 aa19.47■□□□□ 0.71
SHANK2-210ENST00000449116 AEBP1Q8IUX7 1158 aa19.47■□□□□ 0.71
SHANK2-210ENST00000449116 USHBP1Q8N6Y0 703 aa19.47■□□□□ 0.71
SHANK2-210ENST00000449116 RGPD2P0DJD1 1756 aa19.47■□□□□ 0.71
SHANK2-210ENST00000449116 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.46■□□□□ 0.71
SHANK2-210ENST00000449116 VPS72Q15906 364 aa19.45■□□□□ 0.7
SHANK2-210ENST00000449116 RSPH6AQ9H0K4 717 aa19.45■□□□□ 0.7
SHANK2-210ENST00000449116 PNNQ9H307 717 aaKnown RBP19.45■□□□□ 0.7
SHANK2-210ENST00000449116 PRKAR2BP31323 418 aa19.43■□□□□ 0.7
SHANK2-210ENST00000449116 SPATA31A5Q5VU36 1347 aa19.43■□□□□ 0.7
SHANK2-210ENST00000449116 SPATA31A7Q8IWB4 1347 aa19.43■□□□□ 0.7
SHANK2-210ENST00000449116 CCDC9Q9Y3X0 531 aaKnown RBP19.42■□□□□ 0.7
SHANK2-210ENST00000449116 SPATA31A1Q5TZJ5 1347 aa19.42■□□□□ 0.7
SHANK2-210ENST00000449116 CCDC146Q8IYE0 955 aa19.41■□□□□ 0.7
SHANK2-210ENST00000449116 TCP11L2Q8N4U5 519 aa19.41■□□□□ 0.7
SHANK2-210ENST00000449116 RUNDC1Q96C34 613 aa19.41■□□□□ 0.7
SHANK2-210ENST00000449116 PLEKHF1Q96S99 279 aa19.41■□□□□ 0.7
SHANK2-210ENST00000449116 USP35Q9P2H5 1018 aa19.41■□□□□ 0.7
SHANK2-210ENST00000449116 TRPC5Q9UL62 973 aaPredicted RBP19.41■□□□□ 0.7
SHANK2-210ENST00000449116 ATRNO75882 1429 aa19.41■□□□□ 0.7
SHANK2-210ENST00000449116 NEFMP07197 916 aa19.4■□□□□ 0.7
SHANK2-210ENST00000449116 ZNF772Q68DY9 489 aaPredicted RBP19.4■□□□□ 0.7
SHANK2-210ENST00000449116 RAPGEF4Q8WZA2 1011 aa19.4■□□□□ 0.7
SHANK2-210ENST00000449116 THRAP3Q9Y2W1 955 aaKnown RBP19.4■□□□□ 0.7
SHANK2-210ENST00000449116 MAPK8IP3Q9UPT6 1336 aa19.39■□□□□ 0.69
SHANK2-210ENST00000449116 PLEKHG2Q9H7P9 1386 aa19.39■□□□□ 0.69
SHANK2-210ENST00000449116 MEGF6O75095 1541 aa19.38■□□□□ 0.69
SHANK2-210ENST00000449116 IL2RBP14784 551 aa19.38■□□□□ 0.69
SHANK2-210ENST00000449116 TATP17735 454 aaPredicted RBP19.38■□□□□ 0.69
SHANK2-210ENST00000449116 BARGINQ6ZT62 677 aa19.37■□□□□ 0.69
SHANK2-210ENST00000449116 QTRT2Q9H974 415 aaKnown RBP19.37■□□□□ 0.69
SHANK2-210ENST00000449116 DISP2A7MBM2 1401 aa19.36■□□□□ 0.69
SHANK2-210ENST00000449116 GJD4Q96KN9 370 aaPredicted RBP19.36■□□□□ 0.69
SHANK2-210ENST00000449116 PHACTR3Q96KR7 559 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms