RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 HOXC9P31274 260 aa16.05■□□□□ 0.16
RCL1-208ENST00000448872 AMPHP49418 695 aa16.05■□□□□ 0.16
RCL1-208ENST00000448872 HSP90AB2PQ58FF8 381 aa16.05■□□□□ 0.16
RCL1-208ENST00000448872 NGLY1Q96IV0 654 aa16.04■□□□□ 0.16
RCL1-208ENST00000448872 BTG4Q9NY30 223 aa16.04■□□□□ 0.16
RCL1-208ENST00000448872 IP6K1Q92551 441 aa16.03■□□□□ 0.16
RCL1-208ENST00000448872 LTV1Q96GA3 475 aaPredicted RBP16.03■□□□□ 0.16
RCL1-208ENST00000448872 MYBBP1AQ9BQG0 1328 aaKnown RBP16.02■□□□□ 0.16
RCL1-208ENST00000448872 SMG6Q86US8 1419 aaKnown RBP16.02■□□□□ 0.15
RCL1-208ENST00000448872 ANKRD26Q9UPS8 1709 aa16.02■□□□□ 0.15
RCL1-208ENST00000448872 FLT4P35916 1363 aa16.01■□□□□ 0.15
RCL1-208ENST00000448872 MAPK8IP2Q13387 824 aaPredicted RBP16.01■□□□□ 0.15
RCL1-208ENST00000448872 STRN4Q9NRL3 753 aa16.01■□□□□ 0.15
RCL1-208ENST00000448872 CAMTA1Q9Y6Y1 1673 aa16.01■□□□□ 0.15
RCL1-208ENST00000448872 PEAK1Q9H792 1746 aa16■□□□□ 0.15
RCL1-208ENST00000448872 AFF2P51816 1311 aa16■□□□□ 0.15
RCL1-208ENST00000448872 CCDC184Q52MB2 194 aa16■□□□□ 0.15
RCL1-208ENST00000448872 FNBP4Q8N3X1 1017 aaPredicted RBP16■□□□□ 0.15
RCL1-208ENST00000448872 ANKRD24Q8TF21 1146 aa16■□□□□ 0.15
RCL1-208ENST00000448872 RTL1A6NKG5 1358 aa16■□□□□ 0.15
RCL1-208ENST00000448872 SLIT2O94813 1529 aa15.99■□□□□ 0.15
RCL1-208ENST00000448872 MIER1Q8N108 512 aa15.99■□□□□ 0.15
RCL1-208ENST00000448872 LARP1Q6PKG0 1096 aaKnown RBP15.98■□□□□ 0.15
RCL1-208ENST00000448872 USP21Q9UK80 565 aa15.98■□□□□ 0.15
RCL1-208ENST00000448872 INSRP06213 1382 aa15.98■□□□□ 0.15
RCL1-208ENST00000448872 BCL9LQ86UU0 1499 aa15.98■□□□□ 0.15
RCL1-208ENST00000448872 COL5A2P05997 1499 aaPredicted RBP15.98■□□□□ 0.15
RCL1-208ENST00000448872 CDK12Q9NYV4 1490 aaPredicted RBP15.98■□□□□ 0.15
RCL1-208ENST00000448872 KIF24Q5T7B8 1368 aa15.97■□□□□ 0.15
RCL1-208ENST00000448872 EVA1CP58658 441 aa15.97■□□□□ 0.15
RCL1-208ENST00000448872 EIF4A2Q14240 407 aaKnown RBP15.97■□□□□ 0.15
RCL1-208ENST00000448872 BLMP54132 1417 aaPredicted RBP15.97■□□□□ 0.15
RCL1-208ENST00000448872 ERBB3P21860 1342 aa15.97■□□□□ 0.15
RCL1-208ENST00000448872 CSB-PGBD3P0DP91 1061 aa15.97■□□□□ 0.15
RCL1-208ENST00000448872 UNC5CLQ8IV45 518 aa15.97■□□□□ 0.15
RCL1-208ENST00000448872 LMO7Q8WWI1 1683 aa15.96■□□□□ 0.15
RCL1-208ENST00000448872 IL13P35225 146 aa15.96■□□□□ 0.14
RCL1-208ENST00000448872 RGS17Q9UGC6 210 aaPredicted RBP15.96■□□□□ 0.14
RCL1-208ENST00000448872 COL3A1P02461 1466 aaPredicted RBP15.95■□□□□ 0.14
RCL1-208ENST00000448872 COL18A1P39060 1754 aa15.95■□□□□ 0.14
RCL1-208ENST00000448872 COL14A1Q05707 1796 aaKnown RBP15.95■□□□□ 0.14
RCL1-208ENST00000448872 DIAPH1O60610 1272 aaKnown RBP15.94■□□□□ 0.14
RCL1-208ENST00000448872 NBPF6Q5VWK0 638 aa15.94■□□□□ 0.14
RCL1-208ENST00000448872 USHBP1Q8N6Y0 703 aa15.94■□□□□ 0.14
RCL1-208ENST00000448872 NBPF4Q96M43 638 aa15.94■□□□□ 0.14
RCL1-208ENST00000448872 CFAP53Q96M91 514 aa15.94■□□□□ 0.14
RCL1-208ENST00000448872 NLRP2Q9NX02 1062 aa15.94■□□□□ 0.14
RCL1-208ENST00000448872 WDR17Q8IZU2 1322 aa15.94■□□□□ 0.14
RCL1-208ENST00000448872 ABCC6O95255 1503 aa15.94■□□□□ 0.14
RCL1-208ENST00000448872 TOM1L2Q6ZVM7 507 aa15.93■□□□□ 0.14
RCL1-208ENST00000448872 EYA1Q99502 592 aa15.93■□□□□ 0.14
RCL1-208ENST00000448872 USP35Q9P2H5 1018 aa15.93■□□□□ 0.14
RCL1-208ENST00000448872 CCDC9Q9Y3X0 531 aaKnown RBP15.92■□□□□ 0.14
RCL1-208ENST00000448872 LTN1O94822 1766 aa15.92■□□□□ 0.14
RCL1-208ENST00000448872 VPS72Q15906 364 aa15.91■□□□□ 0.14
RCL1-208ENST00000448872 PLCH1Q4KWH8 1693 aa15.91■□□□□ 0.14
RCL1-208ENST00000448872 U2SURPO15042 1029 aaKnown RBP15.91■□□□□ 0.14
RCL1-208ENST00000448872 QTRT2Q9H974 415 aaKnown RBP15.91■□□□□ 0.14
RCL1-208ENST00000448872 MRS2Q9HD23 443 aa15.91■□□□□ 0.14
RCL1-208ENST00000448872 ZNF772Q68DY9 489 aaPredicted RBP15.9■□□□□ 0.14
RCL1-208ENST00000448872 AEBP1Q8IUX7 1158 aa15.9■□□□□ 0.14
RCL1-208ENST00000448872 TRPC5Q9UL62 973 aaPredicted RBP15.9■□□□□ 0.14
RCL1-208ENST00000448872 SPATA31A1Q5TZJ5 1347 aa15.9■□□□□ 0.14
RCL1-208ENST00000448872 SPATA31A5Q5VU36 1347 aa15.9■□□□□ 0.14
RCL1-208ENST00000448872 SPATA31A7Q8IWB4 1347 aa15.9■□□□□ 0.14
RCL1-208ENST00000448872 ATRNO75882 1429 aa15.89■□□□□ 0.13
RCL1-208ENST00000448872 CRB1P82279 1406 aa15.89■□□□□ 0.13
RCL1-208ENST00000448872 POTEAQ6S8J7 498 aa15.89■□□□□ 0.13
RCL1-208ENST00000448872 CARD10Q9BWT7 1032 aa15.89■□□□□ 0.13
RCL1-208ENST00000448872 HMOX1P09601 288 aa15.88■□□□□ 0.13
RCL1-208ENST00000448872 GJD4Q96KN9 370 aaPredicted RBP15.88■□□□□ 0.13
RCL1-208ENST00000448872 IGSF1Q8N6C5 1336 aa15.88■□□□□ 0.13
RCL1-208ENST00000448872 NRAPQ86VF7 1730 aa15.88■□□□□ 0.13
RCL1-208ENST00000448872 MAP2P11137 1827 aaKnown RBP15.88■□□□□ 0.13
RCL1-208ENST00000448872 U2AF1L5P0DN76 240 aaPredicted RBP15.87■□□□□ 0.13
RCL1-208ENST00000448872 U2AF1Q01081 240 aaKnown RBP eCLIP15.87■□□□□ 0.133e-8■■■■■ 30.6
RCL1-208ENST00000448872 SULT6B1Q6IMI4 303 aa15.87■□□□□ 0.13
RCL1-208ENST00000448872 FAM98CQ17RN3 349 aaKnown RBP15.86■□□□□ 0.13
RCL1-208ENST00000448872 TCP11L2Q8N4U5 519 aa15.86■□□□□ 0.13
RCL1-208ENST00000448872 NUDCQ9Y266 331 aa15.86■□□□□ 0.13
RCL1-208ENST00000448872 NWD2Q9ULI1 1742 aa15.85■□□□□ 0.13
RCL1-208ENST00000448872 CCER2I3L3R5 266 aa15.84■□□□□ 0.13
RCL1-208ENST00000448872 PNISRQ8TF01 805 aaKnown RBP15.84■□□□□ 0.13
RCL1-208ENST00000448872 ADAMTS8Q9UP79 889 aa15.84■□□□□ 0.13
RCL1-208ENST00000448872 RGPD5Q99666 1765 aa15.83■□□□□ 0.13
RCL1-208ENST00000448872 NCAPD2Q15021 1401 aa15.83■□□□□ 0.12
RCL1-208ENST00000448872 WDR43Q15061 677 aaKnown RBP eCLIP15.83■□□□□ 0.12
RCL1-208ENST00000448872 MEGF6O75095 1541 aa15.82■□□□□ 0.12
RCL1-208ENST00000448872 BARGINQ6ZT62 677 aa15.82■□□□□ 0.12
RCL1-208ENST00000448872 RSPH6AQ9H0K4 717 aa15.82■□□□□ 0.12
RCL1-208ENST00000448872 THRAP3Q9Y2W1 955 aaKnown RBP15.82■□□□□ 0.12
RCL1-208ENST00000448872 GLI3P10071 1580 aa15.81■□□□□ 0.12
RCL1-208ENST00000448872 KDRP35968 1356 aa15.81■□□□□ 0.12
RCL1-208ENST00000448872 IL2RBP14784 551 aa15.81■□□□□ 0.12
RCL1-208ENST00000448872 RXRBP28702 533 aa15.81■□□□□ 0.12
RCL1-208ENST00000448872 PRKAR2BP31323 418 aa15.81■□□□□ 0.12
RCL1-208ENST00000448872 RBM6P78332 1123 aaKnown RBP15.81■□□□□ 0.12
RCL1-208ENST00000448872 FAM9BQ8IZU0 186 aa15.81■□□□□ 0.12
RCL1-208ENST00000448872 A0A0G2JS52 829 aa15.8■□□□□ 0.12
RCL1-208ENST00000448872 MYT1Q01538 1121 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms