RNA–Protein interactions for RNA: ENST00000448141.6

CCHCR1-206, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-206ENST00000448141 SPATA31A7Q8IWB4 1347 aa28.37■■■□□ 2.13
CCHCR1-206ENST00000448141 PANK3Q9H999 370 aa28.36■■■□□ 2.13
CCHCR1-206ENST00000448141 AXIN2Q9Y2T1 843 aa28.35■■■□□ 2.13
CCHCR1-206ENST00000448141 ABCC6O95255 1503 aa28.34■■■□□ 2.13
CCHCR1-206ENST00000448141 LARP1Q6PKG0 1096 aaKnown RBP28.34■■■□□ 2.13
CCHCR1-206ENST00000448141 BRWD3Q6RI45 1802 aa28.32■■■□□ 2.12
CCHCR1-206ENST00000448141 CGNL1Q0VF96 1302 aa28.32■■■□□ 2.12
CCHCR1-206ENST00000448141 SPATA31A1Q5TZJ5 1347 aa28.32■■■□□ 2.12
CCHCR1-206ENST00000448141 CCDC7Q96M83 1385 aa28.32■■■□□ 2.12
CCHCR1-206ENST00000448141 FAM98CQ17RN3 349 aaKnown RBP28.31■■■□□ 2.12
CCHCR1-206ENST00000448141 ANKRD26Q9UPS8 1709 aa28.3■■■□□ 2.12
CCHCR1-206ENST00000448141 FBLN1P23142 703 aa28.3■■■□□ 2.12
CCHCR1-206ENST00000448141 USP35Q9P2H5 1018 aa28.3■■■□□ 2.12
CCHCR1-206ENST00000448141 WASHC2AQ641Q2 1341 aa28.29■■■□□ 2.12
CCHCR1-206ENST00000448141 ONECUT3O60422 494 aaPredicted RBP28.29■■■□□ 2.12
CCHCR1-206ENST00000448141 SEPT12Q8IYM1 358 aa28.29■■■□□ 2.12
CCHCR1-206ENST00000448141 CRB1P82279 1406 aa28.27■■■□□ 2.12
CCHCR1-206ENST00000448141 A0A0G2JS52 829 aa28.27■■■□□ 2.12
CCHCR1-206ENST00000448141 MYT1Q01538 1121 aa28.27■■■□□ 2.12
CCHCR1-206ENST00000448141 THSD7AQ9UPZ6 1657 aa28.26■■■□□ 2.12
CCHCR1-206ENST00000448141 MAP3K19Q56UN5 1328 aa28.26■■■□□ 2.11
CCHCR1-206ENST00000448141 WDR17Q8IZU2 1322 aa28.25■■■□□ 2.11
CCHCR1-206ENST00000448141 TOM1L2Q6ZVM7 507 aa28.24■■■□□ 2.11
CCHCR1-206ENST00000448141 CSB-PGBD3P0DP91 1061 aa28.23■■■□□ 2.11
CCHCR1-206ENST00000448141 RRS1Q15050 365 aaKnown RBP28.23■■■□□ 2.11
CCHCR1-206ENST00000448141 AMPHP49418 695 aa28.22■■■□□ 2.11
CCHCR1-206ENST00000448141 TCP11L2Q8N4U5 519 aa28.22■■■□□ 2.11
CCHCR1-206ENST00000448141 IP6K1Q92551 441 aa28.22■■■□□ 2.11
CCHCR1-206ENST00000448141 BLMP54132 1417 aaPredicted RBP28.21■■■□□ 2.11
CCHCR1-206ENST00000448141 KNSTRNQ9Y448 316 aa28.21■■■□□ 2.11
CCHCR1-206ENST00000448141 BARGINQ6ZT62 677 aa28.2■■■□□ 2.1
CCHCR1-206ENST00000448141 ERBB3P21860 1342 aa28.19■■■□□ 2.1
CCHCR1-206ENST00000448141 PEAK1Q9H792 1746 aa28.19■■■□□ 2.1
CCHCR1-206ENST00000448141 ZEB1P37275 1124 aaPredicted RBP28.19■■■□□ 2.1
CCHCR1-206ENST00000448141 ANKRD24Q8TF21 1146 aa28.19■■■□□ 2.1
CCHCR1-206ENST00000448141 THRAP3Q9Y2W1 955 aaKnown RBP28.19■■■□□ 2.1
CCHCR1-206ENST00000448141 WNK3Q9BYP7 1800 aa28.19■■■□□ 2.1
CCHCR1-206ENST00000448141 HOXC9P31274 260 aa28.18■■■□□ 2.1
CCHCR1-206ENST00000448141 RTL1A6NKG5 1358 aa28.18■■■□□ 2.1
CCHCR1-206ENST00000448141 NSD2O96028 1365 aa28.18■■■□□ 2.1
CCHCR1-206ENST00000448141 MAP2P11137 1827 aaKnown RBP28.18■■■□□ 2.1
CCHCR1-206ENST00000448141 KRT27Q7Z3Y8 459 aa28.16■■■□□ 2.1
CCHCR1-206ENST00000448141 CARD10Q9BWT7 1032 aa28.16■■■□□ 2.1
CCHCR1-206ENST00000448141 FAM208AQ9UK61 1670 aaKnown RBP28.16■■■□□ 2.1
CCHCR1-206ENST00000448141 LTV1Q96GA3 475 aaPredicted RBP28.15■■■□□ 2.1
CCHCR1-206ENST00000448141 PARP4Q9UKK3 1724 aaKnown RBP28.15■■■□□ 2.1
CCHCR1-206ENST00000448141 TNNT2P45379 298 aaPredicted RBP28.14■■■□□ 2.1
CCHCR1-206ENST00000448141 UPF1Q92900 1129 aaKnown RBP eCLIP28.14■■■□□ 2.1
CCHCR1-206ENST00000448141 NLRP2Q9NX02 1062 aa28.14■■■□□ 2.1
CCHCR1-206ENST00000448141 EMILIN1Q9Y6C2 1016 aa28.13■■■□□ 2.09
CCHCR1-206ENST00000448141 RGPD2P0DJD1 1756 aa28.12■■■□□ 2.09
CCHCR1-206ENST00000448141 PER1O15534 1290 aaPredicted RBP28.12■■■□□ 2.09
CCHCR1-206ENST00000448141 AMER1Q5JTC6 1135 aaPredicted RBP28.12■■■□□ 2.09
CCHCR1-206ENST00000448141 FLT4P35916 1363 aa28.11■■■□□ 2.09
CCHCR1-206ENST00000448141 MORC1Q86VD1 984 aa28.11■■■□□ 2.09
CCHCR1-206ENST00000448141 KIF24Q5T7B8 1368 aa28.11■■■□□ 2.09
CCHCR1-206ENST00000448141 EP400Q96L91 3159 aa28.1■■■□□ 2.09
CCHCR1-206ENST00000448141 LRRC37A3O60309 1634 aa28.1■■■□□ 2.09
CCHCR1-206ENST00000448141 PPM1GO15355 546 aaPredicted RBP28.09■■■□□ 2.09
CCHCR1-206ENST00000448141 HSP90AB2PQ58FF8 381 aa28.08■■■□□ 2.09
CCHCR1-206ENST00000448141 INSRP06213 1382 aa28.08■■■□□ 2.09
CCHCR1-206ENST00000448141 FAM182BQ5T319 152 aa28.07■■■□□ 2.08
CCHCR1-206ENST00000448141 POLKQ9UBT6 870 aa28.07■■■□□ 2.08
CCHCR1-206ENST00000448141 DISP2A7MBM2 1401 aa28.06■■■□□ 2.08
CCHCR1-206ENST00000448141 SMG6Q86US8 1419 aaKnown RBP28.06■■■□□ 2.08
CCHCR1-206ENST00000448141 PDE3BQ13370 1112 aa28.05■■■□□ 2.08
CCHCR1-206ENST00000448141 CDCA7Q9BWT1 371 aaPredicted RBP28.04■■■□□ 2.08
CCHCR1-206ENST00000448141 CC2D1BQ5T0F9 858 aaKnown RBP28.03■■■□□ 2.08
CCHCR1-206ENST00000448141 DDB1Q16531 1140 aa28.02■■■□□ 2.08
CCHCR1-206ENST00000448141 CNGB1Q14028 1251 aaPredicted RBP28.01■■■□□ 2.07
CCHCR1-206ENST00000448141 IL2RBP14784 551 aa27.99■■■□□ 2.07
CCHCR1-206ENST00000448141 NBPF6Q5VWK0 638 aa27.99■■■□□ 2.07
CCHCR1-206ENST00000448141 NBPF4Q96M43 638 aa27.99■■■□□ 2.07
CCHCR1-206ENST00000448141 NPC1L1Q9UHC9 1359 aa27.99■■■□□ 2.07
CCHCR1-206ENST00000448141 USHBP1Q8N6Y0 703 aa27.96■■■□□ 2.07
CCHCR1-206ENST00000448141 TNS2Q63HR2 1409 aa27.95■■■□□ 2.07
CCHCR1-206ENST00000448141 EXOC5O00471 708 aa27.95■■■□□ 2.06
CCHCR1-206ENST00000448141 FAM196AQ6ZSG2 479 aa27.95■■■□□ 2.06
CCHCR1-206ENST00000448141 CCDC125Q86Z20 511 aa27.95■■■□□ 2.06
CCHCR1-206ENST00000448141 RGPD1P0DJD0 1748 aa27.95■■■□□ 2.06
CCHCR1-206ENST00000448141 OVOS2A0A0G2JMS6 1433 aa27.92■■■□□ 2.06
CCHCR1-206ENST00000448141 MARCH10Q8NA82 808 aaPredicted RBP27.92■■■□□ 2.06
CCHCR1-206ENST00000448141 EIF4A2Q14240 407 aaKnown RBP27.91■■■□□ 2.06
CCHCR1-206ENST00000448141 TNS1Q9HBL0 1735 aaKnown RBP27.91■■■□□ 2.06
CCHCR1-206ENST00000448141 MEGF6O75095 1541 aa27.91■■■□□ 2.06
CCHCR1-206ENST00000448141 SF3B2Q13435 895 aaKnown RBP27.89■■■□□ 2.06
CCHCR1-206ENST00000448141 SBF2Q86WG5 1849 aa27.89■■■□□ 2.06
CCHCR1-206ENST00000448141 SHANK3Q9BYB0 1731 aa27.87■■■□□ 2.05
CCHCR1-206ENST00000448141 TRIM37O94972 964 aa27.87■■■□□ 2.05
CCHCR1-206ENST00000448141 MTHFSP49914 203 aa27.87■■■□□ 2.05
CCHCR1-206ENST00000448141 RAPGEF4Q8WZA2 1011 aa27.87■■■□□ 2.05
CCHCR1-206ENST00000448141 EYA1Q99502 592 aa27.87■■■□□ 2.05
CCHCR1-206ENST00000448141 NCAPD2Q15021 1401 aa27.86■■■□□ 2.05
CCHCR1-206ENST00000448141 DDX10Q13206 875 aaKnown RBP27.85■■■□□ 2.05
CCHCR1-206ENST00000448141 TATP17735 454 aaPredicted RBP27.84■■■□□ 2.05
CCHCR1-206ENST00000448141 DEFB132Q7Z7B7 95 aa27.83■■■□□ 2.05
CCHCR1-206ENST00000448141 ZCRB1Q8TBF4 217 aaKnown RBP27.82■■■□□ 2.04
CCHCR1-206ENST00000448141 DDX54Q8TDD1 881 aaKnown RBP27.82■■■□□ 2.04
CCHCR1-206ENST00000448141 BCL9O00512 1426 aa27.81■■■□□ 2.04
CCHCR1-206ENST00000448141 IGSF1Q8N6C5 1336 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms