RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 NUTM2EB1AL46 878 aaPredicted RBP10.28□□□□□ -0.76
AC004540.1-206ENST00000448056 CNGB1Q14028 1251 aaPredicted RBP10.28□□□□□ -0.76
AC004540.1-206ENST00000448056 CHADLQ6NUI6 762 aa10.28□□□□□ -0.76
AC004540.1-206ENST00000448056 MORC1Q86VD1 984 aa10.28□□□□□ -0.76
AC004540.1-206ENST00000448056 NUTM2AQ8IVF1 878 aaPredicted RBP10.28□□□□□ -0.76
AC004540.1-206ENST00000448056 KCNH5Q8NCM2 988 aa10.28□□□□□ -0.76
AC004540.1-206ENST00000448056 SPATA31A6Q5VVP1 1343 aa10.28□□□□□ -0.76
AC004540.1-206ENST00000448056 ALS2Q96Q42 1657 aa10.28□□□□□ -0.76
AC004540.1-206ENST00000448056 NSD2O96028 1365 aa10.27□□□□□ -0.76
AC004540.1-206ENST00000448056 PRKAR2AP13861 404 aaKnown RBP10.27□□□□□ -0.77
AC004540.1-206ENST00000448056 FBLN1P23142 703 aa10.27□□□□□ -0.77
AC004540.1-206ENST00000448056 HAP1P54257 671 aaPredicted RBP10.27□□□□□ -0.77
AC004540.1-206ENST00000448056 OVOS2A0A0J9YW53 1432 aa10.26□□□□□ -0.77
AC004540.1-206ENST00000448056 OVOS2Q6IE36 1432 aa10.26□□□□□ -0.77
AC004540.1-206ENST00000448056 PIK3C2AO00443 1686 aa10.26□□□□□ -0.77
AC004540.1-206ENST00000448056 SOX12O15370 315 aa10.26□□□□□ -0.77
AC004540.1-206ENST00000448056 TNNT2P45379 298 aaPredicted RBP10.26□□□□□ -0.77
AC004540.1-206ENST00000448056 ZC3H6P61129 1189 aaKnown RBP10.26□□□□□ -0.77
AC004540.1-206ENST00000448056 FAM83GA6ND36 823 aa10.25□□□□□ -0.77
AC004540.1-206ENST00000448056 ADAMTS2O95450 1211 aa10.25□□□□□ -0.77
AC004540.1-206ENST00000448056 NUBP1P53384 320 aa10.25□□□□□ -0.77
AC004540.1-206ENST00000448056 MED1Q15648 1581 aaPredicted RBP10.25□□□□□ -0.77
AC004540.1-206ENST00000448056 ILDR2Q71H61 639 aa10.24□□□□□ -0.77
AC004540.1-206ENST00000448056 ARHGEF25Q86VW2 580 aa10.24□□□□□ -0.77
AC004540.1-206ENST00000448056 FARP1Q9Y4F1 1045 aaPredicted RBP10.24□□□□□ -0.77
AC004540.1-206ENST00000448056 COL22A1Q8NFW1 1626 aaPredicted RBP10.24□□□□□ -0.77
AC004540.1-206ENST00000448056 SHPRHQ149N8 1683 aa10.23□□□□□ -0.77
AC004540.1-206ENST00000448056 RRS1Q15050 365 aaKnown RBP10.23□□□□□ -0.77
AC004540.1-206ENST00000448056 RALBP1Q15311 655 aa10.23□□□□□ -0.77
AC004540.1-206ENST00000448056 POLKQ9UBT6 870 aa10.23□□□□□ -0.77
AC004540.1-206ENST00000448056 CPDO75976 1380 aa10.23□□□□□ -0.77
AC004540.1-206ENST00000448056 AATKQ6ZMQ8 1374 aa10.23□□□□□ -0.77
AC004540.1-206ENST00000448056 SLIT3O75094 1523 aa10.23□□□□□ -0.77
AC004540.1-206ENST00000448056 CHRNA2Q15822 529 aa10.22□□□□□ -0.77
AC004540.1-206ENST00000448056 DIEXFQ68CQ4 756 aaKnown RBP10.22□□□□□ -0.77
AC004540.1-206ENST00000448056 PRKRIP1Q9H875 184 aaPredicted RBP10.22□□□□□ -0.77
AC004540.1-206ENST00000448056 PRDM11Q9NQV5 511 aa10.22□□□□□ -0.77
AC004540.1-206ENST00000448056 MAP3K19Q56UN5 1328 aa10.22□□□□□ -0.77
AC004540.1-206ENST00000448056 KIAA0232Q92628 1395 aa10.22□□□□□ -0.77
AC004540.1-206ENST00000448056 ZBTB7CA1YPR0 619 aa10.21□□□□□ -0.77
AC004540.1-206ENST00000448056 PPM1GO15355 546 aaPredicted RBP10.21□□□□□ -0.77
AC004540.1-206ENST00000448056 ANP32CO43423 234 aa10.21□□□□□ -0.77
AC004540.1-206ENST00000448056 PPP2R1AP30153 589 aa10.21□□□□□ -0.77
AC004540.1-206ENST00000448056 AMPHP49418 695 aa10.21□□□□□ -0.77
AC004540.1-206ENST00000448056 MTHFSP49914 203 aa10.21□□□□□ -0.77
AC004540.1-206ENST00000448056 MEX3CQ5U5Q3 659 aaKnown RBP10.21□□□□□ -0.77
AC004540.1-206ENST00000448056 IP6K1Q92551 441 aa10.21□□□□□ -0.77
AC004540.1-206ENST00000448056 NGLY1Q96IV0 654 aa10.21□□□□□ -0.77
AC004540.1-206ENST00000448056 AXIN2Q9Y2T1 843 aa10.21□□□□□ -0.77
AC004540.1-206ENST00000448056 EMILIN1Q9Y6C2 1016 aa10.21□□□□□ -0.77
AC004540.1-206ENST00000448056 PARD3Q8TEW0 1356 aa10.21□□□□□ -0.78
AC004540.1-206ENST00000448056 USP54Q70EL1 1684 aa10.21□□□□□ -0.78
AC004540.1-206ENST00000448056 KIF20BQ96Q89 1820 aa10.21□□□□□ -0.78
AC004540.1-206ENST00000448056 LRP6O75581 1613 aa10.2□□□□□ -0.78
AC004540.1-206ENST00000448056 NFAT5O94916 1531 aa10.2□□□□□ -0.78
AC004540.1-206ENST00000448056 C8orf37Q96NL8 207 aa10.2□□□□□ -0.78
AC004540.1-206ENST00000448056 MARF1Q9Y4F3 1742 aaKnown RBP10.2□□□□□ -0.78
AC004540.1-206ENST00000448056 HOXC9P31274 260 aa10.19□□□□□ -0.78
AC004540.1-206ENST00000448056 HSP90AB2PQ58FF8 381 aa10.19□□□□□ -0.78
AC004540.1-206ENST00000448056 FNBP4Q8N3X1 1017 aaPredicted RBP10.19□□□□□ -0.78
AC004540.1-206ENST00000448056 BTG4Q9NY30 223 aa10.19□□□□□ -0.78
AC004540.1-206ENST00000448056 CRYBG1Q9Y4K1 1723 aa10.19□□□□□ -0.78
AC004540.1-206ENST00000448056 KIF24Q5T7B8 1368 aa10.18□□□□□ -0.78
AC004540.1-206ENST00000448056 PHRF1Q9P1Y6 1649 aaKnown RBP10.18□□□□□ -0.78
AC004540.1-206ENST00000448056 MYBBP1AQ9BQG0 1328 aaKnown RBP10.17□□□□□ -0.78
AC004540.1-206ENST00000448056 EVA1CP58658 441 aa10.17□□□□□ -0.78
AC004540.1-206ENST00000448056 ANKRD26Q9UPS8 1709 aa10.16□□□□□ -0.78
AC004540.1-206ENST00000448056 FLT4P35916 1363 aa10.16□□□□□ -0.78
AC004540.1-206ENST00000448056 UNC5CLQ8IV45 518 aa10.16□□□□□ -0.78
AC004540.1-206ENST00000448056 USP21Q9UK80 565 aa10.16□□□□□ -0.78
AC004540.1-206ENST00000448056 ABCA3Q99758 1704 aa10.16□□□□□ -0.78
AC004540.1-206ENST00000448056 RTL1A6NKG5 1358 aa10.15□□□□□ -0.78
AC004540.1-206ENST00000448056 INSRP06213 1382 aa10.15□□□□□ -0.78
AC004540.1-206ENST00000448056 AFF2P51816 1311 aa10.15□□□□□ -0.78
AC004540.1-206ENST00000448056 RASEFQ8IZ41 740 aa10.15□□□□□ -0.78
AC004540.1-206ENST00000448056 ANKRD24Q8TF21 1146 aa10.15□□□□□ -0.78
AC004540.1-206ENST00000448056 LTV1Q96GA3 475 aaPredicted RBP10.15□□□□□ -0.78
AC004540.1-206ENST00000448056 CFAP53Q96M91 514 aa10.15□□□□□ -0.78
AC004540.1-206ENST00000448056 STRN4Q9NRL3 753 aa10.15□□□□□ -0.78
AC004540.1-206ENST00000448056 CAMTA1Q9Y6Y1 1673 aa10.15□□□□□ -0.79
AC004540.1-206ENST00000448056 BLMP54132 1417 aaPredicted RBP10.15□□□□□ -0.79
AC004540.1-206ENST00000448056 SMG6Q86US8 1419 aaKnown RBP10.15□□□□□ -0.79
AC004540.1-206ENST00000448056 SLIT2O94813 1529 aa10.14□□□□□ -0.79
AC004540.1-206ENST00000448056 SOCS7O14512 581 aa10.14□□□□□ -0.79
AC004540.1-206ENST00000448056 CSB-PGBD3P0DP91 1061 aa10.14□□□□□ -0.79
AC004540.1-206ENST00000448056 IL13P35225 146 aa10.14□□□□□ -0.79
AC004540.1-206ENST00000448056 EIF4A2Q14240 407 aaKnown RBP10.14□□□□□ -0.79
AC004540.1-206ENST00000448056 LARP1Q6PKG0 1096 aaKnown RBP10.14□□□□□ -0.79
AC004540.1-206ENST00000448056 BCL9LQ86UU0 1499 aa10.14□□□□□ -0.79
AC004540.1-206ENST00000448056 MAP2P11137 1827 aaKnown RBP10.14□□□□□ -0.79
AC004540.1-206ENST00000448056 COL18A1P39060 1754 aa10.14□□□□□ -0.79
AC004540.1-206ENST00000448056 ERBB3P21860 1342 aa10.13□□□□□ -0.79
AC004540.1-206ENST00000448056 DIAPH1O60610 1272 aaKnown RBP10.13□□□□□ -0.79
AC004540.1-206ENST00000448056 GSE1Q14687 1217 aa10.13□□□□□ -0.79
AC004540.1-206ENST00000448056 ZNF772Q68DY9 489 aaPredicted RBP10.13□□□□□ -0.79
AC004540.1-206ENST00000448056 QTRT2Q9H974 415 aaKnown RBP10.13□□□□□ -0.79
AC004540.1-206ENST00000448056 RGS17Q9UGC6 210 aaPredicted RBP10.13□□□□□ -0.79
AC004540.1-206ENST00000448056 COL14A1Q05707 1796 aaKnown RBP10.13□□□□□ -0.79
AC004540.1-206ENST00000448056 ABCC6O95255 1503 aa10.12□□□□□ -0.79
AC004540.1-206ENST00000448056 WDR17Q8IZU2 1322 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms