RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 LTN1O94822 1766 aa30.15■■■□□ 2.42
APOE-204ENST00000446996 EVA1CP58658 441 aa30.11■■■□□ 2.41
APOE-204ENST00000446996 ZBTB7CA1YPR0 619 aa30.1■■■□□ 2.41
APOE-204ENST00000446996 COL5A2P05997 1499 aaPredicted RBP30.1■■■□□ 2.41
APOE-204ENST00000446996 AMER1Q5JTC6 1135 aaPredicted RBP30.09■■■□□ 2.41
APOE-204ENST00000446996 AXIN2Q9Y2T1 843 aa30.09■■■□□ 2.41
APOE-204ENST00000446996 KIF24Q5T7B8 1368 aa30.08■■■□□ 2.41
APOE-204ENST00000446996 NPC1L1Q9UHC9 1359 aa30.08■■■□□ 2.41
APOE-204ENST00000446996 SPATA31A5Q5VU36 1347 aa30.08■■■□□ 2.41
APOE-204ENST00000446996 SPATA31A7Q8IWB4 1347 aa30.08■■■□□ 2.41
APOE-204ENST00000446996 IP6K1Q92551 441 aa30.08■■■□□ 2.41
APOE-204ENST00000446996 RGPD5Q99666 1765 aa30.08■■■□□ 2.41
APOE-204ENST00000446996 GLI3P10071 1580 aa30.07■■■□□ 2.4
APOE-204ENST00000446996 MAP3K19Q56UN5 1328 aa30.07■■■□□ 2.4
APOE-204ENST00000446996 STRN4Q9NRL3 753 aa30.07■■■□□ 2.4
APOE-204ENST00000446996 BLMP54132 1417 aaPredicted RBP30.06■■■□□ 2.4
APOE-204ENST00000446996 RTL1A6NKG5 1358 aa30.06■■■□□ 2.4
APOE-204ENST00000446996 ONECUT3O60422 494 aaPredicted RBP30.05■■■□□ 2.4
APOE-204ENST00000446996 CCDC9Q9Y3X0 531 aaKnown RBP30.05■■■□□ 2.4
APOE-204ENST00000446996 SPATA31A1Q5TZJ5 1347 aa30.03■■■□□ 2.4
APOE-204ENST00000446996 WDR17Q8IZU2 1322 aa30.03■■■□□ 2.4
APOE-204ENST00000446996 MAP2P11137 1827 aaKnown RBP30.03■■■□□ 2.4
APOE-204ENST00000446996 FBLN1P23142 703 aa30.02■■■□□ 2.4
APOE-204ENST00000446996 AMPHP49418 695 aa30.02■■■□□ 2.4
APOE-204ENST00000446996 LARP1Q6PKG0 1096 aaKnown RBP30.02■■■□□ 2.4
APOE-204ENST00000446996 CRB1P82279 1406 aa30.02■■■□□ 2.4
APOE-204ENST00000446996 HOXC9P31274 260 aa30.01■■■□□ 2.39
APOE-204ENST00000446996 RRS1Q15050 365 aaKnown RBP30.01■■■□□ 2.39
APOE-204ENST00000446996 THRAP3Q9Y2W1 955 aaKnown RBP30.01■■■□□ 2.39
APOE-204ENST00000446996 MORC1Q86VD1 984 aa30■■■□□ 2.39
APOE-204ENST00000446996 ERBB3P21860 1342 aa29.98■■■□□ 2.39
APOE-204ENST00000446996 BARGINQ6ZT62 677 aa29.98■■■□□ 2.39
APOE-204ENST00000446996 RGS12O14924 1447 aa29.97■■■□□ 2.39
APOE-204ENST00000446996 FLT4P35916 1363 aa29.97■■■□□ 2.39
APOE-204ENST00000446996 TOM1L2Q6ZVM7 507 aa29.96■■■□□ 2.39
APOE-204ENST00000446996 TCP11L2Q8N4U5 519 aa29.96■■■□□ 2.39
APOE-204ENST00000446996 CARD10Q9BWT7 1032 aa29.96■■■□□ 2.39
APOE-204ENST00000446996 CSB-PGBD3P0DP91 1061 aa29.95■■■□□ 2.39
APOE-204ENST00000446996 ANKRD24Q8TF21 1146 aa29.95■■■□□ 2.39
APOE-204ENST00000446996 POLKQ9UBT6 870 aa29.95■■■□□ 2.39
APOE-204ENST00000446996 FAM208AQ9UK61 1670 aaKnown RBP29.95■■■□□ 2.38
APOE-204ENST00000446996 INSRP06213 1382 aa29.94■■■□□ 2.38
APOE-204ENST00000446996 EMILIN1Q9Y6C2 1016 aa29.93■■■□□ 2.38
APOE-204ENST00000446996 PEAK1Q9H792 1746 aa29.93■■■□□ 2.38
APOE-204ENST00000446996 FAM98CQ17RN3 349 aaKnown RBP29.92■■■□□ 2.38
APOE-204ENST00000446996 SMG6Q86US8 1419 aaKnown RBP29.91■■■□□ 2.38
APOE-204ENST00000446996 SEPT12Q8IYM1 358 aa29.91■■■□□ 2.38
APOE-204ENST00000446996 CC2D1BQ5T0F9 858 aaKnown RBP29.9■■■□□ 2.38
APOE-204ENST00000446996 THSD7AQ9UPZ6 1657 aa29.9■■■□□ 2.38
APOE-204ENST00000446996 TNNT2P45379 298 aaPredicted RBP29.89■■■□□ 2.38
APOE-204ENST00000446996 CDCA7Q9BWT1 371 aaPredicted RBP29.89■■■□□ 2.38
APOE-204ENST00000446996 USP35Q9P2H5 1018 aa29.89■■■□□ 2.38
APOE-204ENST00000446996 ZNF316A6NFI3 1004 aaPredicted RBP29.88■■■□□ 2.37
APOE-204ENST00000446996 HSP90AB2PQ58FF8 381 aa29.88■■■□□ 2.37
APOE-204ENST00000446996 NLRP2Q9NX02 1062 aa29.86■■■□□ 2.37
APOE-204ENST00000446996 BRWD3Q6RI45 1802 aa29.85■■■□□ 2.37
APOE-204ENST00000446996 DDX10Q13206 875 aaKnown RBP29.85■■■□□ 2.37
APOE-204ENST00000446996 PPM1GO15355 546 aaPredicted RBP29.84■■■□□ 2.37
APOE-204ENST00000446996 LTV1Q96GA3 475 aaPredicted RBP29.84■■■□□ 2.37
APOE-204ENST00000446996 WNK3Q9BYP7 1800 aa29.84■■■□□ 2.37
APOE-204ENST00000446996 PARP4Q9UKK3 1724 aaKnown RBP29.82■■■□□ 2.36
APOE-204ENST00000446996 DISP2A7MBM2 1401 aa29.8■■■□□ 2.36
APOE-204ENST00000446996 A0A0G2JS52 829 aa29.8■■■□□ 2.36
APOE-204ENST00000446996 MYT1Q01538 1121 aa29.8■■■□□ 2.36
APOE-204ENST00000446996 KRT27Q7Z3Y8 459 aa29.8■■■□□ 2.36
APOE-204ENST00000446996 RGPD2P0DJD1 1756 aa29.79■■■□□ 2.36
APOE-204ENST00000446996 NBPF6Q5VWK0 638 aa29.77■■■□□ 2.36
APOE-204ENST00000446996 NBPF4Q96M43 638 aa29.77■■■□□ 2.36
APOE-204ENST00000446996 MTHFSP49914 203 aa29.76■■■□□ 2.35
APOE-204ENST00000446996 UPF1Q92900 1129 aaKnown RBP eCLIP29.76■■■□□ 2.35
APOE-204ENST00000446996 IL2RBP14784 551 aa29.75■■■□□ 2.35
APOE-204ENST00000446996 NCAPD2Q15021 1401 aa29.74■■■□□ 2.35
APOE-204ENST00000446996 EIF4A2Q14240 407 aaKnown RBP29.73■■■□□ 2.35
APOE-204ENST00000446996 DDB1Q16531 1140 aa29.73■■■□□ 2.35
APOE-204ENST00000446996 PDE3BQ13370 1112 aa29.72■■■□□ 2.35
APOE-204ENST00000446996 PARD3Q8TEW0 1356 aa29.72■■■□□ 2.35
APOE-204ENST00000446996 EXOC5O00471 708 aa29.71■■■□□ 2.35
APOE-204ENST00000446996 LRRC37A3O60309 1634 aa29.71■■■□□ 2.35
APOE-204ENST00000446996 CNGB1Q14028 1251 aaPredicted RBP29.7■■■□□ 2.35
APOE-204ENST00000446996 EYA1Q99502 592 aa29.7■■■□□ 2.35
APOE-204ENST00000446996 RALBP1Q15311 655 aa29.69■■■□□ 2.34
APOE-204ENST00000446996 PPP2R1AP30153 589 aa29.68■■■□□ 2.34
APOE-204ENST00000446996 TNS2Q63HR2 1409 aa29.66■■■□□ 2.34
APOE-204ENST00000446996 IL13P35225 146 aa29.66■■■□□ 2.34
APOE-204ENST00000446996 IGSF1Q8N6C5 1336 aa29.66■■■□□ 2.34
APOE-204ENST00000446996 PLEKHG2Q9H7P9 1386 aa29.65■■■□□ 2.34
APOE-204ENST00000446996 FAM196AQ6ZSG2 479 aa29.65■■■□□ 2.34
APOE-204ENST00000446996 RAPGEF4Q8WZA2 1011 aa29.65■■■□□ 2.34
APOE-204ENST00000446996 EP400Q96L91 3159 aa29.64■■■□□ 2.34
APOE-204ENST00000446996 CCDC125Q86Z20 511 aa29.64■■■□□ 2.34
APOE-204ENST00000446996 USHBP1Q8N6Y0 703 aa29.64■■■□□ 2.34
APOE-204ENST00000446996 DIAPH1O60610 1272 aaKnown RBP29.63■■■□□ 2.33
APOE-204ENST00000446996 TATP17735 454 aaPredicted RBP29.63■■■□□ 2.33
APOE-204ENST00000446996 CFAP53Q96M91 514 aa29.63■■■□□ 2.33
APOE-204ENST00000446996 OVOS2A0A0G2JMS6 1433 aa29.62■■■□□ 2.33
APOE-204ENST00000446996 RGPD1P0DJD0 1748 aa29.62■■■□□ 2.33
APOE-204ENST00000446996 BCL9O00512 1426 aa29.62■■■□□ 2.33
APOE-204ENST00000446996 COL3A1P02461 1466 aaPredicted RBP29.61■■■□□ 2.33
APOE-204ENST00000446996 MEGF6O75095 1541 aa29.61■■■□□ 2.33
APOE-204ENST00000446996 MARCH10Q8NA82 808 aaPredicted RBP29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms