RNA–Protein interactions for RNA: ENST00000446026.1

SMIM12-204, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM12, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-204ENST00000446026 ATAD2Q6PL18 1390 aa11.55□□□□□ -0.56
SMIM12-204ENST00000446026 CCDC146Q8IYE0 955 aa11.55□□□□□ -0.56
SMIM12-204ENST00000446026 TRAK1Q9UPV9 953 aa11.55□□□□□ -0.56
SMIM12-204ENST00000446026 COL18A1P39060 1754 aa11.54□□□□□ -0.56
SMIM12-204ENST00000446026 MEX3CQ5U5Q3 659 aaKnown RBP11.54□□□□□ -0.56
SMIM12-204ENST00000446026 KRT28Q7Z3Y7 464 aa11.54□□□□□ -0.56
SMIM12-204ENST00000446026 TMF1P82094 1093 aa11.54□□□□□ -0.56
SMIM12-204ENST00000446026 AFF2P51816 1311 aa11.53□□□□□ -0.56
SMIM12-204ENST00000446026 BLMP54132 1417 aaPredicted RBP11.53□□□□□ -0.56
SMIM12-204ENST00000446026 PDE3BQ13370 1112 aa11.53□□□□□ -0.56
SMIM12-204ENST00000446026 POTEAQ6S8J7 498 aa11.53□□□□□ -0.56
SMIM12-204ENST00000446026 CPDO75976 1380 aa11.53□□□□□ -0.56
SMIM12-204ENST00000446026 RGS12O14924 1447 aa11.53□□□□□ -0.56
SMIM12-204ENST00000446026 PARP4Q9UKK3 1724 aaKnown RBP11.53□□□□□ -0.56
SMIM12-204ENST00000446026 USP19O94966 1318 aa11.53□□□□□ -0.56
SMIM12-204ENST00000446026 RGPD1P0DJD0 1748 aa11.52□□□□□ -0.56
SMIM12-204ENST00000446026 RGPD3A6NKT7 1758 aaPredicted RBP11.52□□□□□ -0.56
SMIM12-204ENST00000446026 RGPD4Q7Z3J3 1758 aa11.52□□□□□ -0.56
SMIM12-204ENST00000446026 BRWD3Q6RI45 1802 aa11.52□□□□□ -0.57
SMIM12-204ENST00000446026 CPSF1Q10570 1443 aaKnown RBP11.52□□□□□ -0.57
SMIM12-204ENST00000446026 PPIP5K1Q6PFW1 1433 aa11.52□□□□□ -0.57
SMIM12-204ENST00000446026 USP6P35125 1406 aa11.52□□□□□ -0.57
SMIM12-204ENST00000446026 PPP2R1AP30153 589 aa11.51□□□□□ -0.57
SMIM12-204ENST00000446026 RBM6P78332 1123 aaKnown RBP11.51□□□□□ -0.57
SMIM12-204ENST00000446026 CCDC61Q9Y6R9 512 aa11.51□□□□□ -0.57
SMIM12-204ENST00000446026 EVC2Q86UK5 1308 aa11.51□□□□□ -0.57
SMIM12-204ENST00000446026 NUDT16Q96DE0 195 aaKnown RBP11.51□□□□□ -0.57
SMIM12-204ENST00000446026 SPINK5Q9NQ38 1064 aaPredicted RBP11.51□□□□□ -0.57
SMIM12-204ENST00000446026 TRPC5Q9UL62 973 aaPredicted RBP11.5□□□□□ -0.57
SMIM12-204ENST00000446026 KIF20BQ96Q89 1820 aa11.5□□□□□ -0.57
SMIM12-204ENST00000446026 MINK1Q8N4C8 1332 aaPredicted RBP11.5□□□□□ -0.57
SMIM12-204ENST00000446026 HSP90AA2PQ14568 343 aaPredicted RBP11.5□□□□□ -0.57
SMIM12-204ENST00000446026 DUSP27Q5VZP5 1158 aa11.5□□□□□ -0.57
SMIM12-204ENST00000446026 CDK19Q9BWU1 502 aa11.5□□□□□ -0.57
SMIM12-204ENST00000446026 RRAGDQ9NQL2 400 aaPredicted RBP11.5□□□□□ -0.57
SMIM12-204ENST00000446026 KNSTRNQ9Y448 316 aa11.5□□□□□ -0.57
SMIM12-204ENST00000446026 MYOM1P52179 1685 aa11.5□□□□□ -0.57
SMIM12-204ENST00000446026 FOXO3O43524 673 aa11.49□□□□□ -0.57
SMIM12-204ENST00000446026 RXRBP28702 533 aa11.49□□□□□ -0.57
SMIM12-204ENST00000446026 RGS3P49796 1198 aa11.49□□□□□ -0.57
SMIM12-204ENST00000446026 WDR43Q15061 677 aaKnown RBP eCLIP11.49□□□□□ -0.57
SMIM12-204ENST00000446026 NGLY1Q96IV0 654 aa11.49□□□□□ -0.57
SMIM12-204ENST00000446026 NFAT5O94916 1531 aa11.48□□□□□ -0.57
SMIM12-204ENST00000446026 ANKRD26Q9UPS8 1709 aa11.48□□□□□ -0.57
SMIM12-204ENST00000446026 AMER1Q5JTC6 1135 aaPredicted RBP11.48□□□□□ -0.57
SMIM12-204ENST00000446026 TTC21AQ8NDW8 1320 aa11.48□□□□□ -0.57
SMIM12-204ENST00000446026 DDX17Q92841 729 aaKnown RBP11.48□□□□□ -0.57
SMIM12-204ENST00000446026 USP31Q70CQ4 1352 aa11.48□□□□□ -0.57
SMIM12-204ENST00000446026 NAP1L5Q96NT1 182 aaPredicted RBP11.47□□□□□ -0.57
SMIM12-204ENST00000446026 CD163L1Q9NR16 1453 aa11.47□□□□□ -0.57
SMIM12-204ENST00000446026 A0A0U1RQG5 324 aaPredicted RBP11.46□□□□□ -0.57
SMIM12-204ENST00000446026 MS4A1P11836 297 aa11.46□□□□□ -0.57
SMIM12-204ENST00000446026 VPS72Q15906 364 aa11.46□□□□□ -0.57
SMIM12-204ENST00000446026 LTN1O94822 1766 aa11.46□□□□□ -0.57
SMIM12-204ENST00000446026 BCAR3O75815 825 aa11.46□□□□□ -0.58
SMIM12-204ENST00000446026 UNC5CLQ8IV45 518 aa11.46□□□□□ -0.58
SMIM12-204ENST00000446026 ZNF692Q9BU19 519 aaPredicted RBP11.46□□□□□ -0.58
SMIM12-204ENST00000446026 TNS1Q9HBL0 1735 aaKnown RBP11.46□□□□□ -0.58
SMIM12-204ENST00000446026 KDM2BQ8NHM5 1336 aa11.46□□□□□ -0.58
SMIM12-204ENST00000446026 APAF1O14727 1248 aa11.45□□□□□ -0.58
SMIM12-204ENST00000446026 ONECUT3O60422 494 aaPredicted RBP11.45□□□□□ -0.58
SMIM12-204ENST00000446026 FRAT2O75474 233 aaPredicted RBP11.45□□□□□ -0.58
SMIM12-204ENST00000446026 DAXXQ9UER7 740 aaPredicted RBP11.45□□□□□ -0.58
SMIM12-204ENST00000446026 USP21Q9UK80 565 aa11.45□□□□□ -0.58
SMIM12-204ENST00000446026 ACEP12821 1306 aa11.45□□□□□ -0.58
SMIM12-204ENST00000446026 DDRGK1Q96HY6 314 aa11.45□□□□□ -0.58
SMIM12-204ENST00000446026 EDC4Q6P2E9 1401 aaKnown RBP11.44□□□□□ -0.58
SMIM12-204ENST00000446026 GOLGA2Q08379 1002 aa11.44□□□□□ -0.58
SMIM12-204ENST00000446026 CAMTA1Q9Y6Y1 1673 aa11.44□□□□□ -0.58
SMIM12-204ENST00000446026 C8orf37Q96NL8 207 aa11.44□□□□□ -0.58
SMIM12-204ENST00000446026 PEAK1Q9H792 1746 aa11.44□□□□□ -0.58
SMIM12-204ENST00000446026 ZNF521Q96K83 1311 aa11.44□□□□□ -0.58
SMIM12-204ENST00000446026 NUTM2BA6NNL0 878 aaPredicted RBP11.43□□□□□ -0.58
SMIM12-204ENST00000446026 NUTM2EB1AL46 878 aaPredicted RBP11.43□□□□□ -0.58
SMIM12-204ENST00000446026 HSP90AA1P07900 732 aaKnown RBP11.43□□□□□ -0.58
SMIM12-204ENST00000446026 NUTM2AQ8IVF1 878 aaPredicted RBP11.43□□□□□ -0.58
SMIM12-204ENST00000446026 QTRT2Q9H974 415 aaKnown RBP11.43□□□□□ -0.58
SMIM12-204ENST00000446026 TNNT2P45379 298 aaPredicted RBP11.43□□□□□ -0.58
SMIM12-204ENST00000446026 NGDNQ8NEJ9 315 aaKnown RBP11.43□□□□□ -0.58
SMIM12-204ENST00000446026 RRP9O43818 475 aaKnown RBP11.42□□□□□ -0.58
SMIM12-204ENST00000446026 C8orf34Q49A92 452 aa11.42□□□□□ -0.58
SMIM12-204ENST00000446026 CCDC125Q86Z20 511 aa11.42□□□□□ -0.58
SMIM12-204ENST00000446026 RREB1Q92766 1687 aa11.42□□□□□ -0.58
SMIM12-204ENST00000446026 LRRC37A3O60309 1634 aa11.42□□□□□ -0.58
SMIM12-204ENST00000446026 AATKQ6ZMQ8 1374 aa11.42□□□□□ -0.58
SMIM12-204ENST00000446026 SAFB2Q14151 953 aaKnown RBP eCLIP11.41□□□□□ -0.58
SMIM12-204ENST00000446026 NEUROD2Q15784 382 aa11.41□□□□□ -0.58
SMIM12-204ENST00000446026 DISP2A7MBM2 1401 aa11.41□□□□□ -0.58
SMIM12-204ENST00000446026 SLFN5Q08AF3 891 aa11.41□□□□□ -0.58
SMIM12-204ENST00000446026 GJD4Q96KN9 370 aaPredicted RBP11.41□□□□□ -0.58
SMIM12-204ENST00000446026 RGPD5Q99666 1765 aa11.41□□□□□ -0.58
SMIM12-204ENST00000446026 PMFBP1Q8TBY8 1022 aa11.4□□□□□ -0.58
SMIM12-204ENST00000446026 CARD14Q9BXL6 1004 aa11.4□□□□□ -0.58
SMIM12-204ENST00000446026 OVOS2A0A0J9YW53 1432 aa11.4□□□□□ -0.58
SMIM12-204ENST00000446026 OVOS2Q6IE36 1432 aa11.4□□□□□ -0.58
SMIM12-204ENST00000446026 COL5A2P05997 1499 aaPredicted RBP11.4□□□□□ -0.58
SMIM12-204ENST00000446026 RRP7AQ9Y3A4 280 aaKnown RBP11.4□□□□□ -0.59
SMIM12-204ENST00000446026 BCL9O00512 1426 aa11.4□□□□□ -0.59
SMIM12-204ENST00000446026 SBF2Q86WG5 1849 aa11.39□□□□□ -0.59
SMIM12-204ENST00000446026 CENPQQ7L2Z9 268 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms