RNA–Protein interactions for RNA: ENST00000444664.5

SHC1-209, Transcript of SHC adaptor protein 1, humanhuman

TSL 5

Gene SHC1, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-209ENST00000444664 COG3Q96JB2 828 aa23.2■■□□□ 1.3
SHC1-209ENST00000444664 AXIN2Q9Y2T1 843 aa23.2■■□□□ 1.3
SHC1-209ENST00000444664 KIF7Q2M1P5 1343 aa23.2■■□□□ 1.3
SHC1-209ENST00000444664 LARP1Q6PKG0 1096 aaKnown RBP23.19■■□□□ 1.3
SHC1-209ENST00000444664 SPATA31A1Q5TZJ5 1347 aa23.19■■□□□ 1.3
SHC1-209ENST00000444664 FAM98CQ17RN3 349 aaKnown RBP23.18■■□□□ 1.3
SHC1-209ENST00000444664 ABCC6O95255 1503 aa23.18■■□□□ 1.3
SHC1-209ENST00000444664 ONECUT3O60422 494 aaPredicted RBP23.16■■□□□ 1.3
SHC1-209ENST00000444664 SEPT12Q8IYM1 358 aa23.16■■□□□ 1.3
SHC1-209ENST00000444664 USP35Q9P2H5 1018 aa23.16■■□□□ 1.3
SHC1-209ENST00000444664 THSD7AQ9UPZ6 1657 aa23.16■■□□□ 1.3
SHC1-209ENST00000444664 FBLN1P23142 703 aa23.15■■□□□ 1.3
SHC1-209ENST00000444664 PANK3Q9H999 370 aa23.15■■□□□ 1.3
SHC1-209ENST00000444664 A0A0G2JS52 829 aa23.14■■□□□ 1.3
SHC1-209ENST00000444664 MYT1Q01538 1121 aa23.14■■□□□ 1.3
SHC1-209ENST00000444664 EP400Q96L91 3159 aa23.13■■□□□ 1.29
SHC1-209ENST00000444664 ANKRD26Q9UPS8 1709 aa23.13■■□□□ 1.29
SHC1-209ENST00000444664 CRB1P82279 1406 aa23.13■■□□□ 1.29
SHC1-209ENST00000444664 WNK3Q9BYP7 1800 aa23.11■■□□□ 1.29
SHC1-209ENST00000444664 WDR17Q8IZU2 1322 aa23.11■■□□□ 1.29
SHC1-209ENST00000444664 CGNL1Q0VF96 1302 aa23.1■■□□□ 1.29
SHC1-209ENST00000444664 MAP3K19Q56UN5 1328 aa23.1■■□□□ 1.29
SHC1-209ENST00000444664 CCDC7Q96M83 1385 aa23.1■■□□□ 1.29
SHC1-209ENST00000444664 TOM1L2Q6ZVM7 507 aa23.09■■□□□ 1.29
SHC1-209ENST00000444664 CSB-PGBD3P0DP91 1061 aa23.08■■□□□ 1.29
SHC1-209ENST00000444664 TCP11L2Q8N4U5 519 aa23.08■■□□□ 1.29
SHC1-209ENST00000444664 UPF1Q92900 1129 aaKnown RBP eCLIP23.08■■□□□ 1.291e-6■■■■■ 27.8
SHC1-209ENST00000444664 WASHC2AQ641Q2 1341 aa23.08■■□□□ 1.29
SHC1-209ENST00000444664 RRS1Q15050 365 aaKnown RBP23.08■■□□□ 1.28
SHC1-209ENST00000444664 BARGINQ6ZT62 677 aa23.07■■□□□ 1.28
SHC1-209ENST00000444664 KRT27Q7Z3Y8 459 aa23.07■■□□□ 1.28
SHC1-209ENST00000444664 PEAK1Q9H792 1746 aa23.07■■□□□ 1.28
SHC1-209ENST00000444664 BLMP54132 1417 aaPredicted RBP23.06■■□□□ 1.28
SHC1-209ENST00000444664 ERBB3P21860 1342 aa23.06■■□□□ 1.28
SHC1-209ENST00000444664 IP6K1Q92551 441 aa23.06■■□□□ 1.28
SHC1-209ENST00000444664 MAP2P11137 1827 aaKnown RBP23.05■■□□□ 1.28
SHC1-209ENST00000444664 PARP4Q9UKK3 1724 aaKnown RBP23.05■■□□□ 1.28
SHC1-209ENST00000444664 HOXC9P31274 260 aa23.05■■□□□ 1.28
SHC1-209ENST00000444664 AMPHP49418 695 aa23.05■■□□□ 1.28
SHC1-209ENST00000444664 ANKRD24Q8TF21 1146 aa23.05■■□□□ 1.28
SHC1-209ENST00000444664 THRAP3Q9Y2W1 955 aaKnown RBP23.05■■□□□ 1.28
SHC1-209ENST00000444664 RGPD2P0DJD1 1756 aa23.04■■□□□ 1.28
SHC1-209ENST00000444664 FAM208AQ9UK61 1670 aaKnown RBP23.03■■□□□ 1.28
SHC1-209ENST00000444664 CARD10Q9BWT7 1032 aa23.03■■□□□ 1.28
SHC1-209ENST00000444664 RTL1A6NKG5 1358 aa23.02■■□□□ 1.28
SHC1-209ENST00000444664 LRRC37A3O60309 1634 aa23.02■■□□□ 1.28
SHC1-209ENST00000444664 LTV1Q96GA3 475 aaPredicted RBP23.02■■□□□ 1.28
SHC1-209ENST00000444664 FAM182BQ5T319 152 aa23.01■■□□□ 1.27
SHC1-209ENST00000444664 NLRP2Q9NX02 1062 aa23.01■■□□□ 1.27
SHC1-209ENST00000444664 KNSTRNQ9Y448 316 aa23■■□□□ 1.27
SHC1-209ENST00000444664 EMILIN1Q9Y6C2 1016 aa23■■□□□ 1.27
SHC1-209ENST00000444664 NSD2O96028 1365 aa22.99■■□□□ 1.27
SHC1-209ENST00000444664 TNNT2P45379 298 aaPredicted RBP22.99■■□□□ 1.27
SHC1-209ENST00000444664 DISP2A7MBM2 1401 aa22.98■■□□□ 1.27
SHC1-209ENST00000444664 FLT4P35916 1363 aa22.97■■□□□ 1.27
SHC1-209ENST00000444664 PER1O15534 1290 aaPredicted RBP22.96■■□□□ 1.27
SHC1-209ENST00000444664 HSP90AB2PQ58FF8 381 aa22.96■■□□□ 1.27
SHC1-209ENST00000444664 AMER1Q5JTC6 1135 aaPredicted RBP22.96■■□□□ 1.27
SHC1-209ENST00000444664 KIF24Q5T7B8 1368 aa22.95■■□□□ 1.26
SHC1-209ENST00000444664 INSRP06213 1382 aa22.94■■□□□ 1.26
SHC1-209ENST00000444664 PPM1GO15355 546 aaPredicted RBP22.94■■□□□ 1.26
SHC1-209ENST00000444664 PDE3BQ13370 1112 aa22.93■■□□□ 1.26
SHC1-209ENST00000444664 MORC1Q86VD1 984 aa22.93■■□□□ 1.26
SHC1-209ENST00000444664 POLKQ9UBT6 870 aa22.93■■□□□ 1.26
SHC1-209ENST00000444664 DDB1Q16531 1140 aa22.92■■□□□ 1.26
SHC1-209ENST00000444664 CDCA7Q9BWT1 371 aaPredicted RBP22.92■■□□□ 1.26
SHC1-209ENST00000444664 SMG6Q86US8 1419 aaKnown RBP22.91■■□□□ 1.26
SHC1-209ENST00000444664 RGPD1P0DJD0 1748 aa22.9■■□□□ 1.26
SHC1-209ENST00000444664 NBPF6Q5VWK0 638 aa22.89■■□□□ 1.26
SHC1-209ENST00000444664 NBPF4Q96M43 638 aa22.89■■□□□ 1.26
SHC1-209ENST00000444664 TNS1Q9HBL0 1735 aaKnown RBP22.89■■□□□ 1.25
SHC1-209ENST00000444664 TNS2Q63HR2 1409 aa22.88■■□□□ 1.25
SHC1-209ENST00000444664 IL2RBP14784 551 aa22.88■■□□□ 1.25
SHC1-209ENST00000444664 ZEB1P37275 1124 aaPredicted RBP22.88■■□□□ 1.25
SHC1-209ENST00000444664 CC2D1BQ5T0F9 858 aaKnown RBP22.88■■□□□ 1.25
SHC1-209ENST00000444664 CCDC125Q86Z20 511 aa22.88■■□□□ 1.25
SHC1-209ENST00000444664 USHBP1Q8N6Y0 703 aa22.87■■□□□ 1.25
SHC1-209ENST00000444664 SBF2Q86WG5 1849 aa22.87■■□□□ 1.25
SHC1-209ENST00000444664 CNGB1Q14028 1251 aaPredicted RBP22.86■■□□□ 1.25
SHC1-209ENST00000444664 FAM196AQ6ZSG2 479 aa22.86■■□□□ 1.25
SHC1-209ENST00000444664 EXOC5O00471 708 aa22.85■■□□□ 1.25
SHC1-209ENST00000444664 MARCH10Q8NA82 808 aaPredicted RBP22.85■■□□□ 1.25
SHC1-209ENST00000444664 OVOS2A0A0G2JMS6 1433 aa22.85■■□□□ 1.25
SHC1-209ENST00000444664 MEGF6O75095 1541 aa22.85■■□□□ 1.25
SHC1-209ENST00000444664 NPC1L1Q9UHC9 1359 aa22.83■■□□□ 1.25
SHC1-209ENST00000444664 SHANK3Q9BYB0 1731 aa22.83■■□□□ 1.25
SHC1-209ENST00000444664 TRIM37O94972 964 aa22.82■■□□□ 1.24
SHC1-209ENST00000444664 SF3B2Q13435 895 aaKnown RBP22.82■■□□□ 1.24
SHC1-209ENST00000444664 DEFB132Q7Z7B7 95 aa22.82■■□□□ 1.24
SHC1-209ENST00000444664 EIF4A2Q14240 407 aaKnown RBP22.81■■□□□ 1.24
SHC1-209ENST00000444664 NCAPD2Q15021 1401 aa22.79■■□□□ 1.24
SHC1-209ENST00000444664 EYA1Q99502 592 aa22.79■■□□□ 1.24
SHC1-209ENST00000444664 RAPGEF4Q8WZA2 1011 aa22.77■■□□□ 1.24
SHC1-209ENST00000444664 BCL9O00512 1426 aa22.76■■□□□ 1.23
SHC1-209ENST00000444664 KAT6BQ8WYB5 2073 aa22.76■■□□□ 1.23
SHC1-209ENST00000444664 BAG6P46379 1132 aa22.76■■□□□ 1.23
SHC1-209ENST00000444664 MTHFSP49914 203 aa22.76■■□□□ 1.23
SHC1-209ENST00000444664 TATP17735 454 aaPredicted RBP22.75■■□□□ 1.23
SHC1-209ENST00000444664 PKD1L3Q7Z443 1732 aa22.74■■□□□ 1.23
SHC1-209ENST00000444664 PTF1AQ7RTS3 328 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms