RNA–Protein interactions for RNA: ENST00000443438.5

RER1-205, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 540 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-205ENST00000443438 NCOA3Q9Y6Q9 1424 aa11.18□□□□□ -0.62
RER1-205ENST00000443438 STRCP1A6NGW2 1772 aa11.18□□□□□ -0.62
RER1-205ENST00000443438 RGPD1P0DJD0 1748 aa11.18□□□□□ -0.62
RER1-205ENST00000443438 SBNO1A3KN83 1393 aa11.18□□□□□ -0.62
RER1-205ENST00000443438 BCAR3O75815 825 aa11.18□□□□□ -0.62
RER1-205ENST00000443438 ESCO1Q5FWF5 840 aa11.18□□□□□ -0.62
RER1-205ENST00000443438 ORAI2Q96SN7 254 aa11.18□□□□□ -0.62
RER1-205ENST00000443438 CRBNQ96SW2 442 aa11.18□□□□□ -0.62
RER1-205ENST00000443438 NLRP6P59044 892 aa11.17□□□□□ -0.62
RER1-205ENST00000443438 PELP1Q8IZL8 1130 aaKnown RBP11.17□□□□□ -0.62
RER1-205ENST00000443438 MYH16Q9H6N6 1097 aa11.17□□□□□ -0.62
RER1-205ENST00000443438 C19orf44Q9H6X5 657 aa11.17□□□□□ -0.62
RER1-205ENST00000443438 TSHZ2Q9NRE2 1034 aa11.17□□□□□ -0.62
RER1-205ENST00000443438 C1orf167Q5SNV9 1468 aa11.17□□□□□ -0.62
RER1-205ENST00000443438 KIF24Q5T7B8 1368 aa11.16□□□□□ -0.62
RER1-205ENST00000443438 FANCIQ9NVI1 1328 aa11.16□□□□□ -0.62
RER1-205ENST00000443438 RARSP54136 660 aaKnown RBP11.16□□□□□ -0.62
RER1-205ENST00000443438 AEBP1Q8IUX7 1158 aa11.16□□□□□ -0.62
RER1-205ENST00000443438 ABTB2Q8N961 1025 aa11.16□□□□□ -0.62
RER1-205ENST00000443438 ARHGEF10O15013 1369 aa11.16□□□□□ -0.62
RER1-205ENST00000443438 FLT4P35916 1363 aa11.16□□□□□ -0.62
RER1-205ENST00000443438 TMEM94Q12767 1356 aa11.16□□□□□ -0.62
RER1-205ENST00000443438 NUTM2GQ5VZR2 741 aa11.15□□□□□ -0.62
RER1-205ENST00000443438 C14orf37Q86TY3 774 aa11.15□□□□□ -0.62
RER1-205ENST00000443438 MST1RQ04912 1400 aa11.15□□□□□ -0.62
RER1-205ENST00000443438 NFAT5O94916 1531 aa11.14□□□□□ -0.63
RER1-205ENST00000443438 STRCQ7RTU9 1775 aa11.14□□□□□ -0.63
RER1-205ENST00000443438 SOX12O15370 315 aa11.14□□□□□ -0.63
RER1-205ENST00000443438 ZNF853P0CG23 659 aa11.14□□□□□ -0.63
RER1-205ENST00000443438 HOXC9P31274 260 aa11.14□□□□□ -0.63
RER1-205ENST00000443438 PSME1Q06323 249 aa11.14□□□□□ -0.63
RER1-205ENST00000443438 SULT6B1Q6IMI4 303 aa11.14□□□□□ -0.63
RER1-205ENST00000443438 TSR2Q969E8 191 aaKnown RBP11.14□□□□□ -0.63
RER1-205ENST00000443438 RNF216Q9NWF9 866 aaPredicted RBP11.14□□□□□ -0.63
RER1-205ENST00000443438 KDRP35968 1356 aa11.14□□□□□ -0.63
RER1-205ENST00000443438 DCCP43146 1447 aa11.13□□□□□ -0.63
RER1-205ENST00000443438 PAK3O75914 559 aaPredicted RBP11.13□□□□□ -0.63
RER1-205ENST00000443438 CT47B1P0C2W7 299 aaPredicted RBP11.13□□□□□ -0.63
RER1-205ENST00000443438 EXOSC9Q06265 439 aaKnown RBP11.13□□□□□ -0.63
RER1-205ENST00000443438 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.13□□□□□ -0.63
RER1-205ENST00000443438 CCDC136Q96JN2 1154 aa11.13□□□□□ -0.63
RER1-205ENST00000443438 EYA1Q99502 592 aa11.13□□□□□ -0.63
RER1-205ENST00000443438 TRPM3Q9HCF6 1732 aaPredicted RBP11.12□□□□□ -0.63
RER1-205ENST00000443438 IGSF1Q8N6C5 1336 aa11.12□□□□□ -0.63
RER1-205ENST00000443438 FOXO3O43524 673 aa11.12□□□□□ -0.63
RER1-205ENST00000443438 AMPHP49418 695 aa11.12□□□□□ -0.63
RER1-205ENST00000443438 SLIT3O75094 1523 aa11.12□□□□□ -0.63
RER1-205ENST00000443438 RTL1A6NKG5 1358 aa11.12□□□□□ -0.63
RER1-205ENST00000443438 KIF1AQ12756 1690 aa11.11□□□□□ -0.63
RER1-205ENST00000443438 NEFMP07197 916 aa11.11□□□□□ -0.63
RER1-205ENST00000443438 PDE3AQ14432 1141 aa11.11□□□□□ -0.63
RER1-205ENST00000443438 KRT28Q7Z3Y7 464 aa11.11□□□□□ -0.63
RER1-205ENST00000443438 THUMPD2Q9BTF0 503 aaKnown RBP11.11□□□□□ -0.63
RER1-205ENST00000443438 USP19O94966 1318 aa11.1□□□□□ -0.63
RER1-205ENST00000443438 IP6K1Q92551 441 aa11.1□□□□□ -0.63
RER1-205ENST00000443438 IFT57Q9NWB7 429 aa11.1□□□□□ -0.63
RER1-205ENST00000443438 FAM83GA6ND36 823 aa11.09□□□□□ -0.63
RER1-205ENST00000443438 ATF3P18847 181 aa11.09□□□□□ -0.63
RER1-205ENST00000443438 XPCQ01831 940 aaPredicted RBP11.09□□□□□ -0.63
RER1-205ENST00000443438 CALD1Q05682 793 aaKnown RBP11.09□□□□□ -0.63
RER1-205ENST00000443438 LMOD3Q0VAK6 560 aa11.09□□□□□ -0.63
RER1-205ENST00000443438 KCNH5Q8NCM2 988 aa11.09□□□□□ -0.63
RER1-205ENST00000443438 TNNQ9UQP3 1299 aa11.09□□□□□ -0.63
RER1-205ENST00000443438 PHRF1Q9P1Y6 1649 aaKnown RBP11.09□□□□□ -0.63
RER1-205ENST00000443438 DLG5Q8TDM6 1919 aa11.08□□□□□ -0.64
RER1-205ENST00000443438 XIRP1Q702N8 1843 aaKnown RBP11.08□□□□□ -0.64
RER1-205ENST00000443438 GNAI1P63096 354 aa11.08□□□□□ -0.64
RER1-205ENST00000443438 MTHFSDQ2M296 383 aaKnown RBP11.08□□□□□ -0.64
RER1-205ENST00000443438 ARHGEF25Q86VW2 580 aa11.08□□□□□ -0.64
RER1-205ENST00000443438 SSH1Q8WYL5 1049 aa11.08□□□□□ -0.64
RER1-205ENST00000443438 CFAP44Q96MT7 982 aa11.08□□□□□ -0.64
RER1-205ENST00000443438 CRB1P82279 1406 aa11.08□□□□□ -0.64
RER1-205ENST00000443438 KDM2BQ8NHM5 1336 aa11.08□□□□□ -0.64
RER1-205ENST00000443438 GCP02774 474 aa11.07□□□□□ -0.64
RER1-205ENST00000443438 RLBP1P12271 317 aa11.07□□□□□ -0.64
RER1-205ENST00000443438 HOXD11P31277 338 aaPredicted RBP11.07□□□□□ -0.64
RER1-205ENST00000443438 DCTN1Q14203 1278 aa11.07□□□□□ -0.64
RER1-205ENST00000443438 CADPS2Q86UW7 1296 aa11.07□□□□□ -0.64
RER1-205ENST00000443438 PANK1Q8TE04 598 aa11.07□□□□□ -0.64
RER1-205ENST00000443438 MBIPQ9NS73 344 aa11.07□□□□□ -0.64
RER1-205ENST00000443438 ALS2Q96Q42 1657 aa11.07□□□□□ -0.64
RER1-205ENST00000443438 VAMP4O75379 141 aa11.06□□□□□ -0.64
RER1-205ENST00000443438 BRPF1P55201 1214 aaPredicted RBP11.06□□□□□ -0.64
RER1-205ENST00000443438 ALDH1L2Q3SY69 923 aa11.06□□□□□ -0.64
RER1-205ENST00000443438 BCL2L13Q9BXK5 485 aa11.06□□□□□ -0.64
RER1-205ENST00000443438 MED1Q15648 1581 aaPredicted RBP11.06□□□□□ -0.64
RER1-205ENST00000443438 LTN1O94822 1766 aa11.05□□□□□ -0.64
RER1-205ENST00000443438 MSH6P52701 1360 aa11.05□□□□□ -0.64
RER1-205ENST00000443438 CHL1O00533 1208 aa11.05□□□□□ -0.64
RER1-205ENST00000443438 NCAPD2Q15021 1401 aa11.05□□□□□ -0.64
RER1-205ENST00000443438 TSPYL6Q8N831 410 aa11.05□□□□□ -0.64
RER1-205ENST00000443438 DDX17Q92841 729 aaKnown RBP11.05□□□□□ -0.64
RER1-205ENST00000443438 PXDNQ92626 1479 aa11.05□□□□□ -0.64
RER1-205ENST00000443438 ZNF335Q9H4Z2 1342 aaPredicted RBP11.05□□□□□ -0.64
RER1-205ENST00000443438 HTATSF1O43719 755 aaKnown RBP11.04□□□□□ -0.64
RER1-205ENST00000443438 NBPF6Q5VWK0 638 aa11.04□□□□□ -0.64
RER1-205ENST00000443438 ZKSCAN2Q63HK3 967 aa11.04□□□□□ -0.64
RER1-205ENST00000443438 MCM10Q7L590 875 aa11.04□□□□□ -0.64
RER1-205ENST00000443438 C8orf58Q8NAV2 365 aa11.04□□□□□ -0.64
RER1-205ENST00000443438 FRAT1Q92837 279 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms