RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 SPATA31A5Q5VU36 1347 aa16.25■□□□□ 0.19
HSPG2-206ENST00000439717 SPATA31A7Q8IWB4 1347 aa16.25■□□□□ 0.19
HSPG2-206ENST00000439717 COL5A2P05997 1499 aaPredicted RBP16.25■□□□□ 0.19
HSPG2-206ENST00000439717 RGS12O14924 1447 aa16.25■□□□□ 0.19
HSPG2-206ENST00000439717 SOCS7O14512 581 aa16.24■□□□□ 0.19
HSPG2-206ENST00000439717 ONECUT3O60422 494 aaPredicted RBP16.24■□□□□ 0.19
HSPG2-206ENST00000439717 SPATA31A1Q5TZJ5 1347 aa16.23■□□□□ 0.19
HSPG2-206ENST00000439717 AXIN2Q9Y2T1 843 aa16.23■□□□□ 0.19
HSPG2-206ENST00000439717 KNSTRNQ9Y448 316 aa16.23■□□□□ 0.19
HSPG2-206ENST00000439717 NSD2O96028 1365 aa16.23■□□□□ 0.19
HSPG2-206ENST00000439717 LARP1Q6PKG0 1096 aaKnown RBP16.22■□□□□ 0.19
HSPG2-206ENST00000439717 LTN1O94822 1766 aa16.21■□□□□ 0.19
HSPG2-206ENST00000439717 IP6K1Q92551 441 aa16.21■□□□□ 0.19
HSPG2-206ENST00000439717 MAP3K19Q56UN5 1328 aa16.2■□□□□ 0.18
HSPG2-206ENST00000439717 WDR17Q8IZU2 1322 aa16.2■□□□□ 0.18
HSPG2-206ENST00000439717 BLMP54132 1417 aaPredicted RBP16.2■□□□□ 0.18
HSPG2-206ENST00000439717 CRB1P82279 1406 aa16.2■□□□□ 0.18
HSPG2-206ENST00000439717 THRAP3Q9Y2W1 955 aaKnown RBP16.2■□□□□ 0.18
HSPG2-206ENST00000439717 RTL1A6NKG5 1358 aa16.19■□□□□ 0.18
HSPG2-206ENST00000439717 KIF24Q5T7B8 1368 aa16.19■□□□□ 0.18
HSPG2-206ENST00000439717 AMPHP49418 695 aa16.19■□□□□ 0.18
HSPG2-206ENST00000439717 FAM98CQ17RN3 349 aaKnown RBP16.19■□□□□ 0.18
HSPG2-206ENST00000439717 BARGINQ6ZT62 677 aa16.19■□□□□ 0.18
HSPG2-206ENST00000439717 SEPT12Q8IYM1 358 aa16.19■□□□□ 0.18
HSPG2-206ENST00000439717 TCP11L2Q8N4U5 519 aa16.19■□□□□ 0.18
HSPG2-206ENST00000439717 PER1O15534 1290 aaPredicted RBP16.18■□□□□ 0.18
HSPG2-206ENST00000439717 CSB-PGBD3P0DP91 1061 aa16.18■□□□□ 0.18
HSPG2-206ENST00000439717 FBLN1P23142 703 aa16.18■□□□□ 0.18
HSPG2-206ENST00000439717 TOM1L2Q6ZVM7 507 aa16.18■□□□□ 0.18
HSPG2-206ENST00000439717 ANKRD26Q9UPS8 1709 aa16.18■□□□□ 0.18
HSPG2-206ENST00000439717 ERBB3P21860 1342 aa16.18■□□□□ 0.18
HSPG2-206ENST00000439717 HOXC9P31274 260 aa16.17■□□□□ 0.18
HSPG2-206ENST00000439717 RRS1Q15050 365 aaKnown RBP16.17■□□□□ 0.18
HSPG2-206ENST00000439717 AMER1Q5JTC6 1135 aaPredicted RBP16.17■□□□□ 0.18
HSPG2-206ENST00000439717 CARD10Q9BWT7 1032 aa16.17■□□□□ 0.18
HSPG2-206ENST00000439717 USP35Q9P2H5 1018 aa16.17■□□□□ 0.18
HSPG2-206ENST00000439717 RGPD5Q99666 1765 aa16.17■□□□□ 0.18
HSPG2-206ENST00000439717 ANKRD24Q8TF21 1146 aa16.16■□□□□ 0.18
HSPG2-206ENST00000439717 A0A0G2JS52 829 aa16.15■□□□□ 0.18
HSPG2-206ENST00000439717 MYT1Q01538 1121 aa16.15■□□□□ 0.18
HSPG2-206ENST00000439717 THSD7AQ9UPZ6 1657 aa16.14■□□□□ 0.18
HSPG2-206ENST00000439717 FLT4P35916 1363 aa16.14■□□□□ 0.17
HSPG2-206ENST00000439717 MORC1Q86VD1 984 aa16.14■□□□□ 0.17
HSPG2-206ENST00000439717 INSRP06213 1382 aa16.13■□□□□ 0.17
HSPG2-206ENST00000439717 NPC1L1Q9UHC9 1359 aa16.13■□□□□ 0.17
HSPG2-206ENST00000439717 KRT27Q7Z3Y8 459 aa16.13■□□□□ 0.17
HSPG2-206ENST00000439717 CDCA7Q9BWT1 371 aaPredicted RBP16.13■□□□□ 0.17
HSPG2-206ENST00000439717 NLRP2Q9NX02 1062 aa16.12■□□□□ 0.17
HSPG2-206ENST00000439717 POLKQ9UBT6 870 aa16.12■□□□□ 0.17
HSPG2-206ENST00000439717 EMILIN1Q9Y6C2 1016 aa16.12■□□□□ 0.17
HSPG2-206ENST00000439717 FAM208AQ9UK61 1670 aaKnown RBP16.11■□□□□ 0.17
HSPG2-206ENST00000439717 SMG6Q86US8 1419 aaKnown RBP16.11■□□□□ 0.17
HSPG2-206ENST00000439717 TNNT2P45379 298 aaPredicted RBP16.11■□□□□ 0.17
HSPG2-206ENST00000439717 LTV1Q96GA3 475 aaPredicted RBP16.11■□□□□ 0.17
HSPG2-206ENST00000439717 PEAK1Q9H792 1746 aa16.11■□□□□ 0.17
HSPG2-206ENST00000439717 BRWD3Q6RI45 1802 aa16.1■□□□□ 0.17
HSPG2-206ENST00000439717 HSP90AB2PQ58FF8 381 aa16.1■□□□□ 0.17
HSPG2-206ENST00000439717 PPM1GO15355 546 aaPredicted RBP16.09■□□□□ 0.17
HSPG2-206ENST00000439717 PARP4Q9UKK3 1724 aaKnown RBP16.08■□□□□ 0.17
HSPG2-206ENST00000439717 MAP2P11137 1827 aaKnown RBP16.08■□□□□ 0.17
HSPG2-206ENST00000439717 PDE3BQ13370 1112 aa16.08■□□□□ 0.16
HSPG2-206ENST00000439717 CC2D1BQ5T0F9 858 aaKnown RBP16.08■□□□□ 0.16
HSPG2-206ENST00000439717 UPF1Q92900 1129 aaKnown RBP eCLIP16.08■□□□□ 0.16
HSPG2-206ENST00000439717 DISP2A7MBM2 1401 aa16.08■□□□□ 0.16
HSPG2-206ENST00000439717 WNK3Q9BYP7 1800 aa16.07■□□□□ 0.16
HSPG2-206ENST00000439717 IL2RBP14784 551 aa16.06■□□□□ 0.16
HSPG2-206ENST00000439717 DDB1Q16531 1140 aa16.06■□□□□ 0.16
HSPG2-206ENST00000439717 NBPF6Q5VWK0 638 aa16.05■□□□□ 0.16
HSPG2-206ENST00000439717 CCDC125Q86Z20 511 aa16.05■□□□□ 0.16
HSPG2-206ENST00000439717 NBPF4Q96M43 638 aa16.05■□□□□ 0.16
HSPG2-206ENST00000439717 EXOC5O00471 708 aa16.04■□□□□ 0.16
HSPG2-206ENST00000439717 LRRC37A3O60309 1634 aa16.04■□□□□ 0.16
HSPG2-206ENST00000439717 FAM196AQ6ZSG2 479 aa16.03■□□□□ 0.16
HSPG2-206ENST00000439717 TNS2Q63HR2 1409 aa16.02■□□□□ 0.15
HSPG2-206ENST00000439717 EP400Q96L91 3159 aa16.01■□□□□ 0.15
HSPG2-206ENST00000439717 MTHFSP49914 203 aa16.01■□□□□ 0.15
HSPG2-206ENST00000439717 EIF4A2Q14240 407 aaKnown RBP16.01■□□□□ 0.15
HSPG2-206ENST00000439717 NCAPD2Q15021 1401 aa16.01■□□□□ 0.15
HSPG2-206ENST00000439717 RGPD2P0DJD1 1756 aa16■□□□□ 0.15
HSPG2-206ENST00000439717 DDX10Q13206 875 aaKnown RBP16■□□□□ 0.15
HSPG2-206ENST00000439717 FAM182BQ5T319 152 aa16■□□□□ 0.15
HSPG2-206ENST00000439717 OVOS2A0A0G2JMS6 1433 aa16■□□□□ 0.15
HSPG2-206ENST00000439717 CNGB1Q14028 1251 aaPredicted RBP15.99■□□□□ 0.15
HSPG2-206ENST00000439717 USHBP1Q8N6Y0 703 aa15.99■□□□□ 0.15
HSPG2-206ENST00000439717 MARCH10Q8NA82 808 aaPredicted RBP15.99■□□□□ 0.15
HSPG2-206ENST00000439717 RAPGEF4Q8WZA2 1011 aa15.99■□□□□ 0.15
HSPG2-206ENST00000439717 EYA1Q99502 592 aa15.99■□□□□ 0.15
HSPG2-206ENST00000439717 BCL9O00512 1426 aa15.98■□□□□ 0.15
HSPG2-206ENST00000439717 TATP17735 454 aaPredicted RBP15.98■□□□□ 0.15
HSPG2-206ENST00000439717 SF3B2Q13435 895 aaKnown RBP15.98■□□□□ 0.15
HSPG2-206ENST00000439717 ZNF316A6NFI3 1004 aaPredicted RBP15.97■□□□□ 0.15
HSPG2-206ENST00000439717 MEGF6O75095 1541 aa15.97■□□□□ 0.15
HSPG2-206ENST00000439717 IGSF1Q8N6C5 1336 aa15.96■□□□□ 0.15
HSPG2-206ENST00000439717 IL13P35225 146 aa15.96■□□□□ 0.15
HSPG2-206ENST00000439717 ZCRB1Q8TBF4 217 aaKnown RBP15.96■□□□□ 0.15
HSPG2-206ENST00000439717 PLEKHG2Q9H7P9 1386 aa15.96■□□□□ 0.15
HSPG2-206ENST00000439717 PPP2R1AP30153 589 aa15.95■□□□□ 0.14
HSPG2-206ENST00000439717 RGPD1P0DJD0 1748 aa15.94■□□□□ 0.14
HSPG2-206ENST00000439717 DIAPH1O60610 1272 aaKnown RBP15.94■□□□□ 0.14
HSPG2-206ENST00000439717 PARD3Q8TEW0 1356 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms