RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 PDZRN3Q9UPQ7 1066 aa14.32□□□□□ -0.12
TRAPPC9-202ENST00000438773 DDX58O95786 925 aaKnown RBP14.31□□□□□ -0.12
TRAPPC9-202ENST00000438773 AIMP1Q12904 312 aaKnown RBP14.31□□□□□ -0.12
TRAPPC9-202ENST00000438773 USHBP1Q8N6Y0 703 aa14.31□□□□□ -0.12
TRAPPC9-202ENST00000438773 IQGAP3Q86VI3 1631 aa14.31□□□□□ -0.12
TRAPPC9-202ENST00000438773 UBAP1LF5GYI3 381 aa14.31□□□□□ -0.12
TRAPPC9-202ENST00000438773 TATP17735 454 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC9-202ENST00000438773 PRDM11Q9NQV5 511 aa14.3□□□□□ -0.12
TRAPPC9-202ENST00000438773 SYTL4Q96C24 671 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC9-202ENST00000438773 STRN4Q9NRL3 753 aa14.3□□□□□ -0.12
TRAPPC9-202ENST00000438773 MAGI2Q86UL8 1455 aa14.3□□□□□ -0.12
TRAPPC9-202ENST00000438773 LTKP29376 864 aa14.3□□□□□ -0.12
TRAPPC9-202ENST00000438773 GPATCH3Q96I76 525 aa14.3□□□□□ -0.12
TRAPPC9-202ENST00000438773 SBNO2Q9Y2G9 1366 aa14.3□□□□□ -0.12
TRAPPC9-202ENST00000438773 TOM1O60784 492 aa14.29□□□□□ -0.12
TRAPPC9-202ENST00000438773 TMEM57Q8N5G2 664 aa14.29□□□□□ -0.12
TRAPPC9-202ENST00000438773 RILPL2Q969X0 211 aa14.29□□□□□ -0.12
TRAPPC9-202ENST00000438773 IFT57Q9NWB7 429 aa14.29□□□□□ -0.12
TRAPPC9-202ENST00000438773 TAF7LQ5H9L4 462 aa14.29□□□□□ -0.12
TRAPPC9-202ENST00000438773 TMEM2Q9UHN6 1383 aa14.29□□□□□ -0.12
TRAPPC9-202ENST00000438773 FAM83GA6ND36 823 aa14.29□□□□□ -0.12
TRAPPC9-202ENST00000438773 GNAT3A8MTJ3 354 aa14.29□□□□□ -0.12
TRAPPC9-202ENST00000438773 ABCA9Q8IUA7 1624 aa14.28□□□□□ -0.12
TRAPPC9-202ENST00000438773 ZMYM4Q5VZL5 1548 aa14.28□□□□□ -0.12
TRAPPC9-202ENST00000438773 UBTFL1P0CB47 393 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC9-202ENST00000438773 TAOK2Q9UL54 1235 aa14.27□□□□□ -0.12
TRAPPC9-202ENST00000438773 TRPM1Q7Z4N2 1603 aa14.27□□□□□ -0.12
TRAPPC9-202ENST00000438773 TTC21AQ8NDW8 1320 aa14.27□□□□□ -0.12
TRAPPC9-202ENST00000438773 UNC13BO14795 1591 aa14.27□□□□□ -0.13
TRAPPC9-202ENST00000438773 TET3O43151 1660 aa14.27□□□□□ -0.13
TRAPPC9-202ENST00000438773 GORABQ5T7V8 394 aa14.27□□□□□ -0.13
TRAPPC9-202ENST00000438773 TOM1L2Q6ZVM7 507 aa14.27□□□□□ -0.13
TRAPPC9-202ENST00000438773 KRT28Q7Z3Y7 464 aa14.27□□□□□ -0.13
TRAPPC9-202ENST00000438773 MYOM2P54296 1465 aa14.27□□□□□ -0.13
TRAPPC9-202ENST00000438773 GNAI3P08754 354 aa14.27□□□□□ -0.13
TRAPPC9-202ENST00000438773 RIC3Q7Z5B4 369 aa14.27□□□□□ -0.13
TRAPPC9-202ENST00000438773 ABCC3O15438 1527 aa14.26□□□□□ -0.13
TRAPPC9-202ENST00000438773 EFCAB6Q5THR3 1501 aa14.26□□□□□ -0.13
TRAPPC9-202ENST00000438773 AEBP1Q8IUX7 1158 aa14.26□□□□□ -0.13
TRAPPC9-202ENST00000438773 SEC24BO95487 1268 aa14.26□□□□□ -0.13
TRAPPC9-202ENST00000438773 IGHDP01880 384 aa14.26□□□□□ -0.13
TRAPPC9-202ENST00000438773 NAP1L2Q9ULW6 460 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC9-202ENST00000438773 EIF4A2Q14240 407 aaKnown RBP14.25□□□□□ -0.13
TRAPPC9-202ENST00000438773 CCDC27Q2M243 656 aa14.25□□□□□ -0.13
TRAPPC9-202ENST00000438773 ALDH1L2Q3SY69 923 aa14.25□□□□□ -0.13
TRAPPC9-202ENST00000438773 TRIM27P14373 513 aa14.24□□□□□ -0.13
TRAPPC9-202ENST00000438773 ERVK-7P63135 1459 aa14.24□□□□□ -0.13
TRAPPC9-202ENST00000438773 IL16Q14005 1332 aa14.23□□□□□ -0.13
TRAPPC9-202ENST00000438773 DDX54Q8TDD1 881 aaKnown RBP14.23□□□□□ -0.13
TRAPPC9-202ENST00000438773 PHACTR3Q96KR7 559 aa14.23□□□□□ -0.13
TRAPPC9-202ENST00000438773 MBIPQ9NS73 344 aa14.23□□□□□ -0.13
TRAPPC9-202ENST00000438773 SPG7Q9UQ90 795 aa14.23□□□□□ -0.13
TRAPPC9-202ENST00000438773 BTBD11A6QL63 1104 aa14.23□□□□□ -0.13
TRAPPC9-202ENST00000438773 CADPS2Q86UW7 1296 aa14.23□□□□□ -0.13
TRAPPC9-202ENST00000438773 ZNF521Q96K83 1311 aa14.22□□□□□ -0.13
TRAPPC9-202ENST00000438773 GCC1Q96CN9 775 aa14.22□□□□□ -0.13
TRAPPC9-202ENST00000438773 METP08581 1390 aa14.22□□□□□ -0.13
TRAPPC9-202ENST00000438773 CCT4P50991 539 aaKnown RBP14.22□□□□□ -0.13
TRAPPC9-202ENST00000438773 SF3B2Q13435 895 aaKnown RBP14.22□□□□□ -0.13
TRAPPC9-202ENST00000438773 TAF7Q15545 349 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC9-202ENST00000438773 KIF1BO60333 1816 aa14.22□□□□□ -0.13
TRAPPC9-202ENST00000438773 CLTCL1P53675 1640 aa14.22□□□□□ -0.13
TRAPPC9-202ENST00000438773 GNAI2P04899 355 aa14.21□□□□□ -0.13
TRAPPC9-202ENST00000438773 VSIG10Q8N0Z9 540 aa14.21□□□□□ -0.13
TRAPPC9-202ENST00000438773 SURF6O75683 361 aaKnown RBP14.21□□□□□ -0.13
TRAPPC9-202ENST00000438773 NOL8Q76FK4 1167 aaKnown RBP14.21□□□□□ -0.13
TRAPPC9-202ENST00000438773 ARHGAP31Q2M1Z3 1444 aa14.21□□□□□ -0.14
TRAPPC9-202ENST00000438773 G3BP1Q13283 466 aaKnown RBP eCLIP14.2□□□□□ -0.14
TRAPPC9-202ENST00000438773 MPRIPQ6WCQ1 1025 aa14.2□□□□□ -0.14
TRAPPC9-202ENST00000438773 IFIT2P09913 472 aaKnown RBP14.2□□□□□ -0.14
TRAPPC9-202ENST00000438773 CABP4P57796 275 aa14.2□□□□□ -0.14
TRAPPC9-202ENST00000438773 FOXD4L5Q5VV16 416 aaPredicted RBP14.2□□□□□ -0.14
TRAPPC9-202ENST00000438773 FOXD4L4Q8WXT5 416 aaPredicted RBP14.2□□□□□ -0.14
TRAPPC9-202ENST00000438773 MAP3K19Q56UN5 1328 aa14.2□□□□□ -0.14
TRAPPC9-202ENST00000438773 GTF2E1P29083 439 aaPredicted RBP14.2□□□□□ -0.14
TRAPPC9-202ENST00000438773 C22orf23Q9BZE7 217 aa14.19□□□□□ -0.14
TRAPPC9-202ENST00000438773 SRCIN1Q9C0H9 1055 aa14.19□□□□□ -0.14
TRAPPC9-202ENST00000438773 ZFYVE9O95405 1425 aa14.19□□□□□ -0.14
TRAPPC9-202ENST00000438773 EDC4Q6P2E9 1401 aaKnown RBP14.19□□□□□ -0.14
TRAPPC9-202ENST00000438773 HSP90AB4PQ58FF6 505 aa14.19□□□□□ -0.14
TRAPPC9-202ENST00000438773 REC8O95072 547 aa14.19□□□□□ -0.14
TRAPPC9-202ENST00000438773 ST18O60284 1047 aa14.18□□□□□ -0.14
TRAPPC9-202ENST00000438773 AMOTQ4VCS5 1084 aa14.18□□□□□ -0.14
TRAPPC9-202ENST00000438773 USP19O94966 1318 aa14.18□□□□□ -0.14
TRAPPC9-202ENST00000438773 L1TD1Q5T7N2 865 aaKnown RBP14.18□□□□□ -0.14
TRAPPC9-202ENST00000438773 RSPH6AQ9H0K4 717 aa14.18□□□□□ -0.14
TRAPPC9-202ENST00000438773 C19orf44Q9H6X5 657 aa14.18□□□□□ -0.14
TRAPPC9-202ENST00000438773 SIRT1Q96EB6 747 aa14.18□□□□□ -0.14
TRAPPC9-202ENST00000438773 KDM5AP29375 1690 aaKnown RBP14.17□□□□□ -0.14
TRAPPC9-202ENST00000438773 GOLGA6L3A6NEY3 463 aa14.17□□□□□ -0.14
TRAPPC9-202ENST00000438773 RNF17Q9BXT8 1623 aaKnown RBP14.17□□□□□ -0.14
TRAPPC9-202ENST00000438773 F6X3S4 739 aa14.17□□□□□ -0.14
TRAPPC9-202ENST00000438773 CHD1LQ86WJ1 897 aa14.17□□□□□ -0.14
TRAPPC9-202ENST00000438773 DIAPH3Q9NSV4 1193 aa14.17□□□□□ -0.14
TRAPPC9-202ENST00000438773 FLT4P35916 1363 aa14.17□□□□□ -0.14
TRAPPC9-202ENST00000438773 MYL6BP14649 208 aa14.17□□□□□ -0.14
TRAPPC9-202ENST00000438773 CHRNA2Q15822 529 aa14.17□□□□□ -0.14
TRAPPC9-202ENST00000438773 TNNQ9UQP3 1299 aa14.17□□□□□ -0.14
TRAPPC9-202ENST00000438773 INTS3Q68E01 1043 aaKnown RBP14.16□□□□□ -0.14
TRAPPC9-202ENST00000438773 ANKRD24Q8TF21 1146 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms