RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 CDC14CA4D256 554 aa6.63□□□□□ -1.35
HMGB1P12-201ENST00000438594 CBLBQ13191 982 aa6.63□□□□□ -1.35
HMGB1P12-201ENST00000438594 QPCTQ16769 361 aa6.63□□□□□ -1.35
HMGB1P12-201ENST00000438594 HELBQ8NG08 1087 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P12-201ENST00000438594 C1QTNF2Q9BXJ5 285 aa6.63□□□□□ -1.35
HMGB1P12-201ENST00000438594 PGPEP1Q9NXJ5 209 aa6.63□□□□□ -1.35
HMGB1P12-201ENST00000438594 LIMD1Q9UGP4 676 aa6.63□□□□□ -1.35
HMGB1P12-201ENST00000438594 TRIM66O15016 1216 aa6.62□□□□□ -1.35
HMGB1P12-201ENST00000438594 MAP4K5Q9Y4K4 846 aa6.62□□□□□ -1.35
HMGB1P12-201ENST00000438594 GSK3AP49840 483 aa6.61□□□□□ -1.35
HMGB1P12-201ENST00000438594 PPP1R26Q5T8A7 1209 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P12-201ENST00000438594 SH3BP5LQ7L8J4 393 aa6.61□□□□□ -1.35
HMGB1P12-201ENST00000438594 SH3RF1Q7Z6J0 888 aa6.61□□□□□ -1.35
HMGB1P12-201ENST00000438594 CCDC155Q8N6L0 562 aa6.61□□□□□ -1.35
HMGB1P12-201ENST00000438594 MARSP56192 900 aaKnown RBP6.6□□□□□ -1.35
HMGB1P12-201ENST00000438594 RELBQ01201 579 aa6.6□□□□□ -1.35
HMGB1P12-201ENST00000438594 MYSM1Q5VVJ2 828 aa6.6□□□□□ -1.35
HMGB1P12-201ENST00000438594 TRMT44Q8IYL2 757 aaKnown RBP6.6□□□□□ -1.35
HMGB1P12-201ENST00000438594 VWA5B2Q8N398 1253 aa6.6□□□□□ -1.35
HMGB1P12-201ENST00000438594 IRS1P35568 1242 aa6.59□□□□□ -1.35
HMGB1P12-201ENST00000438594 ERFEQ4G0M1 354 aa6.59□□□□□ -1.35
HMGB1P12-201ENST00000438594 RTL5Q5HYW3 569 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P12-201ENST00000438594 RNFT1Q5M7Z0 435 aa6.59□□□□□ -1.35
HMGB1P12-201ENST00000438594 ZNF385CQ66K41 422 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P12-201ENST00000438594 GPAT2Q6NUI2 795 aa6.59□□□□□ -1.35
HMGB1P12-201ENST00000438594 HOMEZQ8IX15 550 aa6.59□□□□□ -1.35
HMGB1P12-201ENST00000438594 SLC10A4Q96EP9 437 aa6.59□□□□□ -1.35
HMGB1P12-201ENST00000438594 AK7Q96M32 723 aa6.59□□□□□ -1.35
HMGB1P12-201ENST00000438594 AGBL1Q96MI9 1066 aa6.59□□□□□ -1.35
HMGB1P12-201ENST00000438594 ARHGAP9Q9BRR9 750 aa6.59□□□□□ -1.35
HMGB1P12-201ENST00000438594 LILRB3O75022 631 aa6.58□□□□□ -1.36
HMGB1P12-201ENST00000438594 SV2AQ7L0J3 742 aa6.58□□□□□ -1.36
HMGB1P12-201ENST00000438594 WHAMMQ8TF30 809 aa6.58□□□□□ -1.36
HMGB1P12-201ENST00000438594 POLMQ9NP87 494 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P12-201ENST00000438594 ATP1B4Q9UN42 357 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P12-201ENST00000438594 SPINT1O43278 529 aa6.57□□□□□ -1.36
HMGB1P12-201ENST00000438594 ZBTB33Q86T24 672 aa6.57□□□□□ -1.36
HMGB1P12-201ENST00000438594 NANOS1Q8WY41 292 aaKnown RBP6.57□□□□□ -1.36
HMGB1P12-201ENST00000438594 KCTD15Q96SI1 283 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P12-201ENST00000438594 SLC35F4A4IF30 521 aa6.56□□□□□ -1.36
HMGB1P12-201ENST00000438594 ITGA6P23229 1130 aa6.56□□□□□ -1.36
HMGB1P12-201ENST00000438594 CTSOP43234 321 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P12-201ENST00000438594 RAB15P59190 212 aa6.56□□□□□ -1.36
HMGB1P12-201ENST00000438594 Q6ZVU0 165 aa6.56□□□□□ -1.36
HMGB1P12-201ENST00000438594 GPKOWQ92917 476 aaPredicted RBP eCLIP6.56□□□□□ -1.36
HMGB1P12-201ENST00000438594 INSM2Q96T92 566 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P12-201ENST00000438594 POLR3EQ9NVU0 708 aa6.56□□□□□ -1.36
HMGB1P12-201ENST00000438594 CLK2P49760 499 aaKnown RBP6.55□□□□□ -1.36
HMGB1P12-201ENST00000438594 DHX9Q08211 1270 aaKnown RBP6.55□□□□□ -1.36
HMGB1P12-201ENST00000438594 PDE4DQ08499 809 aa6.55□□□□□ -1.36
HMGB1P12-201ENST00000438594 ZNF395Q9H8N7 513 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P12-201ENST00000438594 CTDSPL2Q05D32 466 aa6.54□□□□□ -1.36
HMGB1P12-201ENST00000438594 TUSC1Q2TAM9 212 aa6.54□□□□□ -1.36
HMGB1P12-201ENST00000438594 MAP3K10Q02779 954 aa6.53□□□□□ -1.36
HMGB1P12-201ENST00000438594 PDXDC2PQ6P474 469 aa6.53□□□□□ -1.36
HMGB1P12-201ENST00000438594 CDV3Q9UKY7 258 aaKnown RBP6.53□□□□□ -1.36
HMGB1P12-201ENST00000438594 ADAMTS2O95450 1211 aa6.52□□□□□ -1.37
HMGB1P12-201ENST00000438594 SLURP2P0DP57 97 aa6.52□□□□□ -1.37
HMGB1P12-201ENST00000438594 INTS6LQ5JSJ4 861 aaKnown RBP6.52□□□□□ -1.37
HMGB1P12-201ENST00000438594 LRRN4Q8WUT4 740 aa6.52□□□□□ -1.37
HMGB1P12-201ENST00000438594 SCARF2Q96GP6 870 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P12-201ENST00000438594 FKBPLQ9UIM3 349 aa6.52□□□□□ -1.37
HMGB1P12-201ENST00000438594 GTF3C3Q9Y5Q9 886 aa6.52□□□□□ -1.37
HMGB1P12-201ENST00000438594 DNMT3AQ9Y6K1 912 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P12-201ENST00000438594 NR6A1Q15406 480 aa6.51□□□□□ -1.37
HMGB1P12-201ENST00000438594 KANK3Q6NY19 840 aa6.51□□□□□ -1.37
HMGB1P12-201ENST00000438594 RNF217Q8TC41 542 aa6.51□□□□□ -1.37
HMGB1P12-201ENST00000438594 TMPRSS4Q9NRS4 437 aa6.51□□□□□ -1.37
HMGB1P12-201ENST00000438594 ARHGEF15O94989 841 aa6.5□□□□□ -1.37
HMGB1P12-201ENST00000438594 PTK2Q05397 1052 aa6.5□□□□□ -1.37
HMGB1P12-201ENST00000438594 LYPD4Q6UWN0 246 aa6.5□□□□□ -1.37
HMGB1P12-201ENST00000438594 RSPH6AQ9H0K4 717 aa6.5□□□□□ -1.37
HMGB1P12-201ENST00000438594 IGHA1P01876 353 aa6.49□□□□□ -1.37
HMGB1P12-201ENST00000438594 RANGAP1P46060 587 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P12-201ENST00000438594 ZNF784Q8NCA9 323 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P12-201ENST00000438594 ADAM32Q8TC27 787 aa6.48□□□□□ -1.37
HMGB1P12-201ENST00000438594 SLC24A3Q9HC58 644 aa6.48□□□□□ -1.37
HMGB1P12-201ENST00000438594 SENP3-EIF4A1A0A087X0R7 540 aa6.47□□□□□ -1.37
HMGB1P12-201ENST00000438594 ADH1AP07327 375 aa6.47□□□□□ -1.37
HMGB1P12-201ENST00000438594 RHOQP17081 205 aa6.47□□□□□ -1.37
HMGB1P12-201ENST00000438594 FOXK2Q01167 660 aa6.47□□□□□ -1.37
HMGB1P12-201ENST00000438594 NBPF20Q3BBV1 942 aa6.47□□□□□ -1.37
HMGB1P12-201ENST00000438594 ERICH6Q7L0X2 663 aa6.47□□□□□ -1.37
HMGB1P12-201ENST00000438594 LYSMD3Q7Z3D4 306 aa6.47□□□□□ -1.37
HMGB1P12-201ENST00000438594 PRICKLE2Q7Z3G6 844 aa6.47□□□□□ -1.37
HMGB1P12-201ENST00000438594 DZIP3Q86Y13 1208 aaKnown RBP6.47□□□□□ -1.37
HMGB1P12-201ENST00000438594 ENAMQ9NRM1 1142 aa6.47□□□□□ -1.37
HMGB1P12-201ENST00000438594 AP1G2O75843 785 aa6.46□□□□□ -1.38
HMGB1P12-201ENST00000438594 CELA2BP08218 269 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P12-201ENST00000438594 PTGIRP43119 386 aa6.46□□□□□ -1.38
HMGB1P12-201ENST00000438594 SRSF11Q05519 484 aaKnown RBP6.46□□□□□ -1.38
HMGB1P12-201ENST00000438594 FOXD4L5Q5VV16 416 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P12-201ENST00000438594 RIPOR1Q6ZS17 1223 aa6.46□□□□□ -1.38
HMGB1P12-201ENST00000438594 CUEDC1Q9NWM3 386 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P12-201ENST00000438594 ZC3H4Q9UPT8 1303 aaKnown RBP6.46□□□□□ -1.38
HMGB1P12-201ENST00000438594 ERVH48-1M5A8F1 160 aa6.45□□□□□ -1.38
HMGB1P12-201ENST00000438594 GPR25O00155 361 aa6.45□□□□□ -1.38
HMGB1P12-201ENST00000438594 ADD1P35611 737 aaKnown RBP6.45□□□□□ -1.38
HMGB1P12-201ENST00000438594 NEDD1Q8NHV4 660 aa6.45□□□□□ -1.38
HMGB1P12-201ENST00000438594 GAS6Q14393 721 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms