RNA–Protein interactions for RNA: ENST00000437034.6

CAST-209, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 3,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-209ENST00000437034 IRX5P78411 483 aaPredicted RBP6.54□□□□□ -1.36
CAST-209ENST00000437034 MLECQ14165 292 aa6.54□□□□□ -1.36
CAST-209ENST00000437034 DUSP27Q5VZP5 1158 aa6.54□□□□□ -1.36
CAST-209ENST00000437034 RANBP17Q9H2T7 1088 aaKnown RBP6.54□□□□□ -1.36
CAST-209ENST00000437034 SHROOM2Q13796 1616 aa6.54□□□□□ -1.36
CAST-209ENST00000437034 RRM1P23921 792 aa6.54□□□□□ -1.36
CAST-209ENST00000437034 ABCD1P33897 745 aa6.54□□□□□ -1.36
CAST-209ENST00000437034 ABL2P42684 1182 aa6.54□□□□□ -1.36
CAST-209ENST00000437034 MECOMQ03112 1051 aa6.54□□□□□ -1.36
CAST-209ENST00000437034 CCDC47Q96A33 483 aaKnown RBP6.54□□□□□ -1.36
CAST-209ENST00000437034 NUCKS1Q9H1E3 243 aaKnown RBP6.54□□□□□ -1.36
CAST-209ENST00000437034 JADE2Q9NQC1 790 aa6.54□□□□□ -1.36
CAST-209ENST00000437034 ENOX2Q16206 610 aaKnown RBP6.54□□□□□ -1.36
CAST-209ENST00000437034 CCDC34Q96HJ3 373 aa6.54□□□□□ -1.36
CAST-209ENST00000437034 MPHOSPH6Q99547 160 aaKnown RBP6.54□□□□□ -1.36
CAST-209ENST00000437034 SFMBT1Q9UHJ3 866 aa6.54□□□□□ -1.36
CAST-209ENST00000437034 COQ9O75208 318 aa6.53□□□□□ -1.36
CAST-209ENST00000437034 HMMRO75330 724 aa6.53□□□□□ -1.36
CAST-209ENST00000437034 RBM5P52756 815 aaKnown RBP eCLIP6.53□□□□□ -1.36
CAST-209ENST00000437034 FAM160A1Q05DH4 1040 aa6.53□□□□□ -1.36
CAST-209ENST00000437034 CDC5LQ99459 802 aaKnown RBP6.53□□□□□ -1.36
CAST-209ENST00000437034 GTPBP4Q9BZE4 634 aaKnown RBP6.53□□□□□ -1.36
CAST-209ENST00000437034 TMA7Q9Y2S6 64 aaKnown RBP6.53□□□□□ -1.36
CAST-209ENST00000437034 ZC3H6P61129 1189 aaKnown RBP6.53□□□□□ -1.36
CAST-209ENST00000437034 GSE1Q14687 1217 aa6.53□□□□□ -1.36
CAST-209ENST00000437034 FAM161AQ3B820 660 aa6.53□□□□□ -1.36
CAST-209ENST00000437034 PNISRQ8TF01 805 aaKnown RBP6.53□□□□□ -1.36
CAST-209ENST00000437034 SPACA7Q96KW9 195 aa6.53□□□□□ -1.36
CAST-209ENST00000437034 URB2Q14146 1524 aaKnown RBP6.53□□□□□ -1.36
CAST-209ENST00000437034 ATXN8OSP0DMR3 200 aa6.52□□□□□ -1.37
CAST-209ENST00000437034 PSMC1P62191 440 aaKnown RBP6.52□□□□□ -1.37
CAST-209ENST00000437034 KIAA2012Q0VF49 1180 aa6.52□□□□□ -1.37
CAST-209ENST00000437034 CCAR1Q8IX12 1150 aaKnown RBP6.52□□□□□ -1.37
CAST-209ENST00000437034 ABCF2Q9UG63 623 aa6.52□□□□□ -1.37
CAST-209ENST00000437034 RABL2BQ9UNT1 228 aa6.52□□□□□ -1.37
CAST-209ENST00000437034 SPDYE4A6NLX3 237 aa6.52□□□□□ -1.37
CAST-209ENST00000437034 GOLGA6L22H0YM25 854 aa6.52□□□□□ -1.37
CAST-209ENST00000437034 PPP1R15AO75807 674 aaPredicted RBP6.52□□□□□ -1.37
CAST-209ENST00000437034 ZNF16P17020 682 aaPredicted RBP6.52□□□□□ -1.37
CAST-209ENST00000437034 RFX1P22670 979 aa6.52□□□□□ -1.37
CAST-209ENST00000437034 TXNDC2Q86VQ3 553 aa6.52□□□□□ -1.37
CAST-209ENST00000437034 PLSCR2Q9NRY7 297 aa6.52□□□□□ -1.37
CAST-209ENST00000437034 TOPBP1Q92547 1522 aa6.52□□□□□ -1.37
CAST-209ENST00000437034 TRIM6-TRIM34B2RNG4 842 aa6.52□□□□□ -1.37
CAST-209ENST00000437034 CBFA2T2O43439 604 aa6.52□□□□□ -1.37
CAST-209ENST00000437034 CCDC92Q53HC0 331 aaPredicted RBP6.52□□□□□ -1.37
CAST-209ENST00000437034 TRIM34Q9BYJ4 488 aa6.52□□□□□ -1.37
CAST-209ENST00000437034 SMC4Q9NTJ3 1288 aa6.52□□□□□ -1.37
CAST-209ENST00000437034 TBX4P57082 545 aa6.51□□□□□ -1.37
CAST-209ENST00000437034 PDE4DQ08499 809 aa6.51□□□□□ -1.37
CAST-209ENST00000437034 MCM6Q14566 821 aa6.51□□□□□ -1.37
CAST-209ENST00000437034 ZSCAN30Q86W11 494 aa6.51□□□□□ -1.37
CAST-209ENST00000437034 GIPC2Q8TF65 315 aa6.51□□□□□ -1.37
CAST-209ENST00000437034 AK7Q96M32 723 aa6.51□□□□□ -1.37
CAST-209ENST00000437034 RRAGDQ9NQL2 400 aaPredicted RBP6.51□□□□□ -1.37
CAST-209ENST00000437034 SAMD9Q5K651 1589 aa6.51□□□□□ -1.37
CAST-209ENST00000437034 CTAGE5O15320 804 aa6.51□□□□□ -1.37
CAST-209ENST00000437034 TNNT3P45378 269 aaPredicted RBP6.51□□□□□ -1.37
CAST-209ENST00000437034 HDLBPQ00341 1268 aaKnown RBP6.51□□□□□ -1.37
CAST-209ENST00000437034 VPS37AQ8NEZ2 397 aa6.51□□□□□ -1.37
CAST-209ENST00000437034 AGBL1Q96MI9 1066 aa6.51□□□□□ -1.37
CAST-209ENST00000437034 LNPKQ9C0E8 428 aa6.51□□□□□ -1.37
CAST-209ENST00000437034 KCNJ4P48050 445 aa6.51□□□□□ -1.37
CAST-209ENST00000437034 PAF1Q8N7H5 531 aa6.51□□□□□ -1.37
CAST-209ENST00000437034 DHX38Q92620 1227 aaKnown RBP6.51□□□□□ -1.37
CAST-209ENST00000437034 SEZ6LQ9BYH1 1024 aa6.51□□□□□ -1.37
CAST-209ENST00000437034 ZHX3Q9H4I2 956 aa6.51□□□□□ -1.37
CAST-209ENST00000437034 TCEAL9Q9UHQ7 104 aa6.51□□□□□ -1.37
CAST-209ENST00000437034 ATP1B4Q9UN42 357 aaPredicted RBP6.51□□□□□ -1.37
CAST-209ENST00000437034 MRC2Q9UBG0 1479 aa6.5□□□□□ -1.37
CAST-209ENST00000437034 PLEKHG3A1L390 1219 aa6.5□□□□□ -1.37
CAST-209ENST00000437034 PPFIA3O75145 1194 aa6.5□□□□□ -1.37
CAST-209ENST00000437034 PAK3O75914 559 aaPredicted RBP6.5□□□□□ -1.37
CAST-209ENST00000437034 LRCH2Q5VUJ6 765 aa6.5□□□□□ -1.37
CAST-209ENST00000437034 SETD1BQ9UPS6 1966 aaKnown RBP6.5□□□□□ -1.37
CAST-209ENST00000437034 ADAMTS12P58397 1594 aa6.5□□□□□ -1.37
CAST-209ENST00000437034 LONRF1Q17RB8 773 aa6.5□□□□□ -1.37
CAST-209ENST00000437034 FMNL3Q8IVF7 1028 aa6.5□□□□□ -1.37
CAST-209ENST00000437034 HIP1RO75146 1068 aa6.49□□□□□ -1.37
CAST-209ENST00000437034 CCDC175P0C221 793 aa6.49□□□□□ -1.37
CAST-209ENST00000437034 ATICP31939 592 aa6.49□□□□□ -1.37
CAST-209ENST00000437034 NYAP1Q6ZVC0 841 aa6.49□□□□□ -1.37
CAST-209ENST00000437034 NGDNQ8NEJ9 315 aaKnown RBP6.49□□□□□ -1.37
CAST-209ENST00000437034 PHF8Q9UPP1 1060 aa6.49□□□□□ -1.37
CAST-209ENST00000437034 SYNRGQ9UMZ2 1314 aa6.49□□□□□ -1.37
CAST-209ENST00000437034 PRXQ9BXM0 1461 aa6.49□□□□□ -1.37
CAST-209ENST00000437034 VDRP11473 427 aa6.49□□□□□ -1.37
CAST-209ENST00000437034 KCNA2P16389 499 aa6.49□□□□□ -1.37
CAST-209ENST00000437034 IBSPP21815 317 aaPredicted RBP6.49□□□□□ -1.37
CAST-209ENST00000437034 C9orf131Q5VYM1 1079 aa6.49□□□□□ -1.37
CAST-209ENST00000437034 TAF4BQ92750 862 aa6.49□□□□□ -1.37
CAST-209ENST00000437034 SENP7Q9BQF6 1050 aa6.49□□□□□ -1.37
CAST-209ENST00000437034 CAPN2P17655 700 aa6.49□□□□□ -1.37
CAST-209ENST00000437034 IFT88Q13099 833 aa6.49□□□□□ -1.37
CAST-209ENST00000437034 SCYL1Q96KG9 808 aa6.49□□□□□ -1.37
CAST-209ENST00000437034 NCAPGQ9BPX3 1015 aa6.49□□□□□ -1.37
CAST-209ENST00000437034 GOPCQ9HD26 462 aa6.49□□□□□ -1.37
CAST-209ENST00000437034 LDHCP07864 332 aa6.48□□□□□ -1.37
CAST-209ENST00000437034 CD53P19397 219 aa6.48□□□□□ -1.37
CAST-209ENST00000437034 LARP1BQ659C4 914 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 220.1 ms