RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 UBR1Q8IWV7 1749 aa20.4■□□□□ 0.86
HLA-DQB2-231ENST00000435145 HMOX1P09601 288 aa20.39■□□□□ 0.86
HLA-DQB2-231ENST00000435145 ZRANB1Q9UGI0 708 aa20.39■□□□□ 0.86
HLA-DQB2-231ENST00000435145 PTCH1Q13635 1447 aa20.39■□□□□ 0.86
HLA-DQB2-231ENST00000435145 NRKQ7Z2Y5 1582 aa20.39■□□□□ 0.86
HLA-DQB2-231ENST00000435145 ITSN1Q15811 1721 aa20.39■□□□□ 0.85
HLA-DQB2-231ENST00000435145 BECN1Q14457 450 aa20.39■□□□□ 0.85
HLA-DQB2-231ENST00000435145 UPF2Q9HAU5 1272 aaKnown RBP20.39■□□□□ 0.85
HLA-DQB2-231ENST00000435145 PRR36Q9H6K5 1346 aa20.38■□□□□ 0.85
HLA-DQB2-231ENST00000435145 VAMP4O75379 141 aa20.38■□□□□ 0.85
HLA-DQB2-231ENST00000435145 ARHGAP45Q92619 1136 aa20.38■□□□□ 0.85
HLA-DQB2-231ENST00000435145 ADAMTS13Q76LX8 1427 aa20.38■□□□□ 0.85
HLA-DQB2-231ENST00000435145 GNAI1P63096 354 aa20.37■□□□□ 0.85
HLA-DQB2-231ENST00000435145 COG3Q96JB2 828 aa20.37■□□□□ 0.85
HLA-DQB2-231ENST00000435145 ZNF692Q9BU19 519 aaPredicted RBP20.37■□□□□ 0.85
HLA-DQB2-231ENST00000435145 NCKAP5LQ9HCH0 1330 aa20.36■□□□□ 0.85
HLA-DQB2-231ENST00000435145 MRPL50Q8N5N7 158 aaKnown RBP20.36■□□□□ 0.85
HLA-DQB2-231ENST00000435145 ESF1Q9H501 851 aaKnown RBP20.36■□□□□ 0.85
HLA-DQB2-231ENST00000435145 TOPAZ1Q8N9V7 1692 aa20.35■□□□□ 0.85
HLA-DQB2-231ENST00000435145 ROBO2Q9HCK4 1378 aa20.35■□□□□ 0.85
HLA-DQB2-231ENST00000435145 THUMPD2Q9BTF0 503 aaKnown RBP20.35■□□□□ 0.85
HLA-DQB2-231ENST00000435145 LMOD3Q0VAK6 560 aa20.34■□□□□ 0.85
HLA-DQB2-231ENST00000435145 NUCB1Q02818 461 aa20.34■□□□□ 0.85
HLA-DQB2-231ENST00000435145 MBIPQ9NS73 344 aa20.34■□□□□ 0.85
HLA-DQB2-231ENST00000435145 DLG5Q8TDM6 1919 aa20.33■□□□□ 0.85
HLA-DQB2-231ENST00000435145 GSE1Q14687 1217 aa20.33■□□□□ 0.85
HLA-DQB2-231ENST00000435145 TSPYL6Q8N831 410 aa20.32■□□□□ 0.84
HLA-DQB2-231ENST00000435145 CFAP44Q96MT7 982 aa20.32■□□□□ 0.84
HLA-DQB2-231ENST00000435145 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.32■□□□□ 0.84
HLA-DQB2-231ENST00000435145 ZBTB7BO15156 539 aaPredicted RBP20.32■□□□□ 0.84
HLA-DQB2-231ENST00000435145 FRAT2O75474 233 aaPredicted RBP20.32■□□□□ 0.84
HLA-DQB2-231ENST00000435145 ANTXR1Q9H6X2 564 aa20.32■□□□□ 0.84
HLA-DQB2-231ENST00000435145 ABCC4O15439 1325 aa20.31■□□□□ 0.84
HLA-DQB2-231ENST00000435145 RRS1Q15050 365 aaKnown RBP20.31■□□□□ 0.84
HLA-DQB2-231ENST00000435145 CHMP4BQ9H444 224 aaKnown RBP20.31■□□□□ 0.84
HLA-DQB2-231ENST00000435145 PLEKHG1Q9ULL1 1385 aa20.31■□□□□ 0.84
HLA-DQB2-231ENST00000435145 OVOS2A0A0J9YW53 1432 aa20.31■□□□□ 0.84
HLA-DQB2-231ENST00000435145 OVOS2Q6IE36 1432 aa20.31■□□□□ 0.84
HLA-DQB2-231ENST00000435145 PLEKHG3A1L390 1219 aa20.29■□□□□ 0.84
HLA-DQB2-231ENST00000435145 TBC1D2Q9BYX2 928 aa20.29■□□□□ 0.84
HLA-DQB2-231ENST00000435145 NALCNQ8IZF0 1738 aa20.29■□□□□ 0.84
HLA-DQB2-231ENST00000435145 TTC21BQ7Z4L5 1316 aa20.28■□□□□ 0.84
HLA-DQB2-231ENST00000435145 TWISTNBQ3B726 338 aaPredicted RBP20.27■□□□□ 0.84
HLA-DQB2-231ENST00000435145 CHD1LQ86WJ1 897 aa20.27■□□□□ 0.84
HLA-DQB2-231ENST00000435145 USP6P35125 1406 aa20.26■□□□□ 0.83
HLA-DQB2-231ENST00000435145 C8orf58Q8NAV2 365 aa20.26■□□□□ 0.83
HLA-DQB2-231ENST00000435145 C22orf23Q9BZE7 217 aa20.26■□□□□ 0.83
HLA-DQB2-231ENST00000435145 KIF24Q5T7B8 1368 aa20.26■□□□□ 0.83
HLA-DQB2-231ENST00000435145 USP31Q70CQ4 1352 aa20.26■□□□□ 0.83
HLA-DQB2-231ENST00000435145 SSH2Q76I76 1423 aa20.26■□□□□ 0.83
HLA-DQB2-231ENST00000435145 RGPD1P0DJD0 1748 aa20.26■□□□□ 0.83
HLA-DQB2-231ENST00000435145 EIF4A2Q14240 407 aaKnown RBP20.25■□□□□ 0.83
HLA-DQB2-231ENST00000435145 GCC1Q96CN9 775 aa20.25■□□□□ 0.83
HLA-DQB2-231ENST00000435145 LTKP29376 864 aa20.24■□□□□ 0.83
HLA-DQB2-231ENST00000435145 ACEP12821 1306 aa20.24■□□□□ 0.83
HLA-DQB2-231ENST00000435145 PEAK1Q9H792 1746 aa20.24■□□□□ 0.83
HLA-DQB2-231ENST00000435145 FAM83GA6ND36 823 aa20.24■□□□□ 0.83
HLA-DQB2-231ENST00000435145 API5Q9BZZ5 524 aaKnown RBP20.24■□□□□ 0.83
HLA-DQB2-231ENST00000435145 PTPRUQ92729 1446 aa20.24■□□□□ 0.83
HLA-DQB2-231ENST00000435145 MFAP1P55081 439 aaKnown RBP20.22■□□□□ 0.83
HLA-DQB2-231ENST00000435145 BMP2KLQ5H9B9 411 aa20.22■□□□□ 0.83
HLA-DQB2-231ENST00000435145 LNPKQ9C0E8 428 aa20.22■□□□□ 0.83
HLA-DQB2-231ENST00000435145 AEBP1Q8IUX7 1158 aa20.22■□□□□ 0.83
HLA-DQB2-231ENST00000435145 SIRT2Q8IXJ6 389 aa20.22■□□□□ 0.83
HLA-DQB2-231ENST00000435145 ELL2O00472 640 aaPredicted RBP20.2■□□□□ 0.83
HLA-DQB2-231ENST00000435145 SLKQ9H2G2 1235 aaPredicted RBP20.2■□□□□ 0.83
HLA-DQB2-231ENST00000435145 SLIT1O75093 1534 aa20.2■□□□□ 0.82
HLA-DQB2-231ENST00000435145 ARHGAP23Q9P227 1491 aa20.2■□□□□ 0.82
HLA-DQB2-231ENST00000435145 RBM25P49756 843 aaKnown RBP20.2■□□□□ 0.82
HLA-DQB2-231ENST00000435145 DCTN1Q14203 1278 aa20.2■□□□□ 0.82
HLA-DQB2-231ENST00000435145 SULT6B1Q6IMI4 303 aa20.2■□□□□ 0.82
HLA-DQB2-231ENST00000435145 CHL1O00533 1208 aa20.19■□□□□ 0.82
HLA-DQB2-231ENST00000435145 KIAA0232Q92628 1395 aa20.19■□□□□ 0.82
HLA-DQB2-231ENST00000435145 RGS12O14924 1447 aa20.18■□□□□ 0.82
HLA-DQB2-231ENST00000435145 C1orf115Q9H7X2 142 aa20.17■□□□□ 0.82
HLA-DQB2-231ENST00000435145 INTS3Q68E01 1043 aaKnown RBP20.17■□□□□ 0.82
HLA-DQB2-231ENST00000435145 ARHGEF10O15013 1369 aa20.17■□□□□ 0.82
HLA-DQB2-231ENST00000435145 TTC21AQ8NDW8 1320 aa20.16■□□□□ 0.82
HLA-DQB2-231ENST00000435145 HAP1P54257 671 aaPredicted RBP20.16■□□□□ 0.82
HLA-DQB2-231ENST00000435145 ANKRD45Q5TZF3 282 aa20.16■□□□□ 0.82
HLA-DQB2-231ENST00000435145 CRB1P82279 1406 aa20.15■□□□□ 0.82
HLA-DQB2-231ENST00000435145 HSP90AB2PQ58FF8 381 aa20.15■□□□□ 0.82
HLA-DQB2-231ENST00000435145 NCOA3Q9Y6Q9 1424 aa20.15■□□□□ 0.82
HLA-DQB2-231ENST00000435145 TBX22Q9Y458 520 aa20.14■□□□□ 0.81
HLA-DQB2-231ENST00000435145 SNX21Q969T3 373 aa20.13■□□□□ 0.81
HLA-DQB2-231ENST00000435145 DIP2AQ14689 1571 aa20.13■□□□□ 0.81
HLA-DQB2-231ENST00000435145 FMN2Q9NZ56 1722 aa20.12■□□□□ 0.81
HLA-DQB2-231ENST00000435145 EID1Q9Y6B2 187 aa20.12■□□□□ 0.81
HLA-DQB2-231ENST00000435145 KDRP35968 1356 aa20.12■□□□□ 0.81
HLA-DQB2-231ENST00000435145 ATP10DQ9P241 1426 aa20.12■□□□□ 0.81
HLA-DQB2-231ENST00000435145 SLC26A8Q96RN1 970 aa20.12■□□□□ 0.81
HLA-DQB2-231ENST00000435145 SBNO1A3KN83 1393 aa20.11■□□□□ 0.81
HLA-DQB2-231ENST00000435145 DCTPP1Q9H773 170 aa20.11■□□□□ 0.81
HLA-DQB2-231ENST00000435145 AMOTL2Q9Y2J4 779 aa20.11■□□□□ 0.81
HLA-DQB2-231ENST00000435145 RIMS1Q86UR5 1692 aaKnown RBP20.11■□□□□ 0.81
HLA-DQB2-231ENST00000435145 MAP3K19Q56UN5 1328 aa20.11■□□□□ 0.81
HLA-DQB2-231ENST00000435145 MCM10Q7L590 875 aa20.1■□□□□ 0.81
HLA-DQB2-231ENST00000435145 NUTM2FA1L443 756 aa20.1■□□□□ 0.81
HLA-DQB2-231ENST00000435145 KRT24Q2M2I5 525 aa20.1■□□□□ 0.81
HLA-DQB2-231ENST00000435145 IL27Q8NEV9 243 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms