RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 KIF6Q6ZMV9 814 aa13.5□□□□□ -0.25
SEC16A-206ENST00000431893 PRKAR2BP31323 418 aa13.5□□□□□ -0.25
SEC16A-206ENST00000431893 TWISTNBQ3B726 338 aaPredicted RBP13.5□□□□□ -0.25
SEC16A-206ENST00000431893 GOLGA6L7A0A1B0GV03 622 aa13.5□□□□□ -0.25
SEC16A-206ENST00000431893 FKBP4Q02790 459 aaKnown RBP eCLIP13.5□□□□□ -0.25
SEC16A-206ENST00000431893 PDCL2Q8N4E4 241 aa13.5□□□□□ -0.25
SEC16A-206ENST00000431893 ERLIN1O75477 346 aa13.5□□□□□ -0.25
SEC16A-206ENST00000431893 SLC4A2P04920 1241 aa13.49□□□□□ -0.25
SEC16A-206ENST00000431893 GOLGA6L10A0A0M3HER8 536 aa13.49□□□□□ -0.25
SEC16A-206ENST00000431893 POLR3GO15318 223 aaPredicted RBP13.49□□□□□ -0.25
SEC16A-206ENST00000431893 GNAI2P04899 355 aa13.49□□□□□ -0.25
SEC16A-206ENST00000431893 JAKMIP1Q96N16 626 aaKnown RBP13.49□□□□□ -0.25
SEC16A-206ENST00000431893 DDX54Q8TDD1 881 aaKnown RBP13.49□□□□□ -0.25
SEC16A-206ENST00000431893 PDCP20941 246 aa13.48□□□□□ -0.25
SEC16A-206ENST00000431893 CCDC158Q5M9N0 1113 aa13.48□□□□□ -0.25
SEC16A-206ENST00000431893 PDRG1Q9NUG6 133 aa13.48□□□□□ -0.25
SEC16A-206ENST00000431893 GBP2P32456 591 aaPredicted RBP13.48□□□□□ -0.25
SEC16A-206ENST00000431893 SLC3A2P08195 630 aaKnown RBP13.48□□□□□ -0.25
SEC16A-206ENST00000431893 KRT85P78386 507 aa13.48□□□□□ -0.25
SEC16A-206ENST00000431893 CCDC85AQ96PX6 553 aaPredicted RBP13.48□□□□□ -0.25
SEC16A-206ENST00000431893 NUP62CLQ9H1M0 184 aa13.48□□□□□ -0.25
SEC16A-206ENST00000431893 BCCIPQ9P287 314 aaKnown RBP eCLIP13.48□□□□□ -0.25
SEC16A-206ENST00000431893 GPATCH11Q8N954 259 aa13.47□□□□□ -0.25
SEC16A-206ENST00000431893 WDR33Q9C0J8 1336 aaKnown RBP13.47□□□□□ -0.25
SEC16A-206ENST00000431893 STIM1Q13586 685 aa13.47□□□□□ -0.25
SEC16A-206ENST00000431893 PHF23Q9BUL5 403 aaPredicted RBP13.47□□□□□ -0.25
SEC16A-206ENST00000431893 SRRTQ9BXP5 876 aaKnown RBP13.47□□□□□ -0.25
SEC16A-206ENST00000431893 WASHC2AQ641Q2 1341 aa13.47□□□□□ -0.25
SEC16A-206ENST00000431893 ANKRD18AQ8IVF6 992 aa13.47□□□□□ -0.25
SEC16A-206ENST00000431893 UPF3BQ9BZI7 483 aaKnown RBP13.47□□□□□ -0.25
SEC16A-206ENST00000431893 DACH1Q9UI36 760 aa13.47□□□□□ -0.25
SEC16A-206ENST00000431893 DYDC1Q8WWB3 177 aa13.47□□□□□ -0.25
SEC16A-206ENST00000431893 GOPCQ9HD26 462 aa13.47□□□□□ -0.25
SEC16A-206ENST00000431893 GNAI3P08754 354 aa13.47□□□□□ -0.25
SEC16A-206ENST00000431893 RBM5P52756 815 aaKnown RBP eCLIP13.47□□□□□ -0.25
SEC16A-206ENST00000431893 NLRP6P59044 892 aa13.47□□□□□ -0.25
SEC16A-206ENST00000431893 IL1RAPL2Q9NP60 686 aa13.47□□□□□ -0.25
SEC16A-206ENST00000431893 STRN4Q9NRL3 753 aa13.47□□□□□ -0.25
SEC16A-206ENST00000431893 PRKCSHP14314 528 aaPredicted RBP13.46□□□□□ -0.25
SEC16A-206ENST00000431893 CBFA2T2O43439 604 aa13.46□□□□□ -0.25
SEC16A-206ENST00000431893 XPCQ01831 940 aaPredicted RBP13.46□□□□□ -0.25
SEC16A-206ENST00000431893 AACSQ86V21 672 aa13.46□□□□□ -0.25
SEC16A-206ENST00000431893 GIMAP7Q8NHV1 300 aa13.46□□□□□ -0.25
SEC16A-206ENST00000431893 ZBTB9Q96C00 473 aa13.46□□□□□ -0.25
SEC16A-206ENST00000431893 CCDC97Q96F63 343 aaPredicted RBP13.46□□□□□ -0.25
SEC16A-206ENST00000431893 PPP2R1AP30153 589 aa13.46□□□□□ -0.25
SEC16A-206ENST00000431893 DHX8Q14562 1220 aaKnown RBP13.46□□□□□ -0.25
SEC16A-206ENST00000431893 ESPNB1AK53 854 aa13.46□□□□□ -0.26
SEC16A-206ENST00000431893 HIP1O00291 1037 aa13.45□□□□□ -0.26
SEC16A-206ENST00000431893 MCM2P49736 904 aa13.45□□□□□ -0.26
SEC16A-206ENST00000431893 EIF5P55010 431 aaKnown RBP13.45□□□□□ -0.26
SEC16A-206ENST00000431893 NUTM1Q86Y26 1132 aa13.45□□□□□ -0.26
SEC16A-206ENST00000431893 LARP6Q9BRS8 491 aaKnown RBP13.45□□□□□ -0.26
SEC16A-206ENST00000431893 CFAP100Q494V2 611 aa13.45□□□□□ -0.26
SEC16A-206ENST00000431893 FERMT3Q86UX7 667 aa13.45□□□□□ -0.26
SEC16A-206ENST00000431893 CFAP45Q9UL16 551 aa13.45□□□□□ -0.26
SEC16A-206ENST00000431893 EPB41L2O43491 1005 aaKnown RBP13.45□□□□□ -0.26
SEC16A-206ENST00000431893 PIP4K2AP48426 406 aaPredicted RBP13.45□□□□□ -0.26
SEC16A-206ENST00000431893 ZHX1Q9UKY1 873 aaPredicted RBP13.45□□□□□ -0.26
SEC16A-206ENST00000431893 SPDYE4A6NLX3 237 aa13.45□□□□□ -0.26
SEC16A-206ENST00000431893 USP5P45974 858 aa13.45□□□□□ -0.26
SEC16A-206ENST00000431893 TRIM22Q8IYM9 498 aa13.45□□□□□ -0.26
SEC16A-206ENST00000431893 BACH2Q9BYV9 841 aa13.45□□□□□ -0.26
SEC16A-206ENST00000431893 ZNF644Q9H582 1327 aaPredicted RBP13.45□□□□□ -0.26
SEC16A-206ENST00000431893 MAP2K1Q02750 393 aaPredicted RBP13.45□□□□□ -0.26
SEC16A-206ENST00000431893 JMYQ8N9B5 988 aa13.45□□□□□ -0.26
SEC16A-206ENST00000431893 TRMT1Q9NXH9 659 aaKnown RBP13.45□□□□□ -0.26
SEC16A-206ENST00000431893 TNNT1P13805 278 aa13.44□□□□□ -0.26
SEC16A-206ENST00000431893 CASTP20810 708 aaKnown RBP13.44□□□□□ -0.26
SEC16A-206ENST00000431893 CASQ1P31415 396 aa13.44□□□□□ -0.26
SEC16A-206ENST00000431893 TMCO3Q6UWJ1 677 aa13.44□□□□□ -0.26
SEC16A-206ENST00000431893 GCC1Q96CN9 775 aa13.44□□□□□ -0.26
SEC16A-206ENST00000431893 PRDM2Q13029 1718 aa13.44□□□□□ -0.26
SEC16A-206ENST00000431893 RNF187Q5TA31 235 aaPredicted RBP13.44□□□□□ -0.26
SEC16A-206ENST00000431893 KLHL10Q6JEL2 608 aa13.44□□□□□ -0.26
SEC16A-206ENST00000431893 CHD1LQ86WJ1 897 aa13.44□□□□□ -0.26
SEC16A-206ENST00000431893 ABTB2Q8N961 1025 aa13.44□□□□□ -0.26
SEC16A-206ENST00000431893 RAI14Q9P0K7 980 aa13.44□□□□□ -0.26
SEC16A-206ENST00000431893 GUCY1B3Q02153 619 aa13.44□□□□□ -0.26
SEC16A-206ENST00000431893 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.44□□□□□ -0.26
SEC16A-206ENST00000431893 RUSC2Q8N2Y8 1516 aa13.44□□□□□ -0.26
SEC16A-206ENST00000431893 SMARCA5O60264 1052 aaPredicted RBP13.44□□□□□ -0.26
SEC16A-206ENST00000431893 CEP57L1Q8IYX8 460 aa13.43□□□□□ -0.26
SEC16A-206ENST00000431893 IPO4Q8TEX9 1081 aaKnown RBP13.43□□□□□ -0.26
SEC16A-206ENST00000431893 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.43□□□□□ -0.263e-7■■■□□ 14.7
SEC16A-206ENST00000431893 MROH2BQ7Z745 1585 aa13.43□□□□□ -0.26
SEC16A-206ENST00000431893 SOGA3Q5TF21 947 aa13.43□□□□□ -0.26
SEC16A-206ENST00000431893 NEBLO76041 1014 aa13.43□□□□□ -0.26
SEC16A-206ENST00000431893 MCM4P33991 863 aa13.43□□□□□ -0.26
SEC16A-206ENST00000431893 CCDC83Q8IWF9 413 aa13.43□□□□□ -0.26
SEC16A-206ENST00000431893 CCDC178Q5BJE1 867 aa13.43□□□□□ -0.26
SEC16A-206ENST00000431893 RSPH4AQ5TD94 716 aa13.43□□□□□ -0.26
SEC16A-206ENST00000431893 CGNQ9P2M7 1197 aaKnown RBP13.43□□□□□ -0.26
SEC16A-206ENST00000431893 EZRP15311 586 aaKnown RBP13.43□□□□□ -0.26
SEC16A-206ENST00000431893 ARHGAP29Q52LW3 1261 aa13.43□□□□□ -0.26
SEC16A-206ENST00000431893 UBXN4Q92575 508 aa13.43□□□□□ -0.26
SEC16A-206ENST00000431893 LUC7LQ9NQ29 371 aaKnown RBP13.43□□□□□ -0.26
SEC16A-206ENST00000431893 CHMP4BP1P59074 171 aa13.42□□□□□ -0.26
SEC16A-206ENST00000431893 UBE4AQ14139 1066 aa13.42□□□□□ -0.26
SEC16A-206ENST00000431893 TAF4BQ92750 862 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms