RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 PLCB2Q00722 1185 aa17.63■□□□□ 0.41
SYNGAP1-203ENST00000428982 KIF1BO60333 1816 aa17.62■□□□□ 0.41
SYNGAP1-203ENST00000428982 GOLGA6L6A8MZA4 724 aa17.62■□□□□ 0.41
SYNGAP1-203ENST00000428982 ZBTB22O15209 634 aa17.61■□□□□ 0.41
SYNGAP1-203ENST00000428982 MCM5P33992 734 aa17.61■□□□□ 0.41
SYNGAP1-203ENST00000428982 FOXD4L1Q9NU39 408 aa17.61■□□□□ 0.41
SYNGAP1-203ENST00000428982 KDM2BQ8NHM5 1336 aa17.61■□□□□ 0.41
SYNGAP1-203ENST00000428982 ERICH4A6NGS2 130 aa17.61■□□□□ 0.41
SYNGAP1-203ENST00000428982 DIAPH3Q9NSV4 1193 aa17.61■□□□□ 0.41
SYNGAP1-203ENST00000428982 CABP1Q9NZU7 370 aa17.61■□□□□ 0.41
SYNGAP1-203ENST00000428982 PROSER2Q86WR7 435 aaPredicted RBP17.61■□□□□ 0.41
SYNGAP1-203ENST00000428982 TRERF1Q96PN7 1200 aa17.61■□□□□ 0.41
SYNGAP1-203ENST00000428982 HS1BP3Q53T59 392 aa17.6■□□□□ 0.41
SYNGAP1-203ENST00000428982 SPHKAPQ2M3C7 1700 aa17.6■□□□□ 0.41
SYNGAP1-203ENST00000428982 ERVK-7P63135 1459 aa17.6■□□□□ 0.41
SYNGAP1-203ENST00000428982 GGNBP2Q9H3C7 697 aa17.6■□□□□ 0.41
SYNGAP1-203ENST00000428982 BCCIPQ9P287 314 aaKnown RBP eCLIP17.6■□□□□ 0.41
SYNGAP1-203ENST00000428982 AMOTL2Q9Y2J4 779 aa17.6■□□□□ 0.41
SYNGAP1-203ENST00000428982 LMTK2Q8IWU2 1503 aa17.6■□□□□ 0.41
SYNGAP1-203ENST00000428982 SMC4Q9NTJ3 1288 aa17.59■□□□□ 0.41
SYNGAP1-203ENST00000428982 E9PCH4 1651 aa17.58■□□□□ 0.41
SYNGAP1-203ENST00000428982 CEP152O94986 1710 aa17.58■□□□□ 0.41
SYNGAP1-203ENST00000428982 BCAR3O75815 825 aa17.58■□□□□ 0.41
SYNGAP1-203ENST00000428982 DDX19BQ9UMR2 479 aa17.58■□□□□ 0.4
SYNGAP1-203ENST00000428982 ZKSCAN5Q9Y2L8 839 aa17.58■□□□□ 0.4
SYNGAP1-203ENST00000428982 LAMC1P11047 1609 aa17.57■□□□□ 0.4
SYNGAP1-203ENST00000428982 ATF3P18847 181 aa17.57■□□□□ 0.4
SYNGAP1-203ENST00000428982 PRIMPOLQ96LW4 560 aa17.57■□□□□ 0.4
SYNGAP1-203ENST00000428982 NOL7Q9UMY1 257 aaKnown RBP17.57■□□□□ 0.4
SYNGAP1-203ENST00000428982 CCDC61Q9Y6R9 512 aa17.57■□□□□ 0.4
SYNGAP1-203ENST00000428982 DZIP1LQ8IYY4 767 aaKnown RBP17.57■□□□□ 0.4
SYNGAP1-203ENST00000428982 PANK1Q8TE04 598 aa17.57■□□□□ 0.4
SYNGAP1-203ENST00000428982 RNF17Q9BXT8 1623 aaKnown RBP17.57■□□□□ 0.4
SYNGAP1-203ENST00000428982 ZNF692Q9BU19 519 aaPredicted RBP17.56■□□□□ 0.4
SYNGAP1-203ENST00000428982 CLTCL1P53675 1640 aa17.56■□□□□ 0.4
SYNGAP1-203ENST00000428982 PLEKHH1Q9ULM0 1364 aa17.56■□□□□ 0.4
SYNGAP1-203ENST00000428982 MYOM2P54296 1465 aa17.56■□□□□ 0.4
SYNGAP1-203ENST00000428982 TRPM1Q7Z4N2 1603 aa17.56■□□□□ 0.4
SYNGAP1-203ENST00000428982 AMPHP49418 695 aa17.56■□□□□ 0.4
SYNGAP1-203ENST00000428982 PSME1Q06323 249 aa17.56■□□□□ 0.4
SYNGAP1-203ENST00000428982 ITPRIPQ8IWB1 547 aa17.56■□□□□ 0.4
SYNGAP1-203ENST00000428982 AXDND1Q5T1B0 1012 aaPredicted RBP17.55■□□□□ 0.4
SYNGAP1-203ENST00000428982 TCP11L2Q8N4U5 519 aa17.55■□□□□ 0.4
SYNGAP1-203ENST00000428982 NUDT16Q96DE0 195 aaKnown RBP17.55■□□□□ 0.4
SYNGAP1-203ENST00000428982 FAM193AP78312 1265 aa17.55■□□□□ 0.4
SYNGAP1-203ENST00000428982 HOMEZQ8IX15 550 aa17.55■□□□□ 0.4
SYNGAP1-203ENST00000428982 C22orf23Q9BZE7 217 aa17.55■□□□□ 0.4
SYNGAP1-203ENST00000428982 WASLO00401 505 aaPredicted RBP17.54■□□□□ 0.4
SYNGAP1-203ENST00000428982 CNPY4Q8N129 248 aa17.54■□□□□ 0.4
SYNGAP1-203ENST00000428982 NSD3Q9BZ95 1437 aa17.54■□□□□ 0.4
SYNGAP1-203ENST00000428982 AGLP35573 1532 aa17.54■□□□□ 0.4
SYNGAP1-203ENST00000428982 CAVIN1Q6NZI2 390 aaKnown RBP17.54■□□□□ 0.4
SYNGAP1-203ENST00000428982 GOLGA6L1Q8N7Z2 621 aa17.54■□□□□ 0.4
SYNGAP1-203ENST00000428982 RRP7AQ9Y3A4 280 aaKnown RBP17.54■□□□□ 0.4
SYNGAP1-203ENST00000428982 TMEM2Q9UHN6 1383 aa17.54■□□□□ 0.4
SYNGAP1-203ENST00000428982 PPP1R9BQ96SB3 815 aa17.53■□□□□ 0.4
SYNGAP1-203ENST00000428982 YTHDC2Q9H6S0 1430 aaKnown RBP17.53■□□□□ 0.4
SYNGAP1-203ENST00000428982 ZNF500O60304 480 aaPredicted RBP17.53■□□□□ 0.4
SYNGAP1-203ENST00000428982 POLR3AO14802 1390 aaPredicted RBP17.53■□□□□ 0.4
SYNGAP1-203ENST00000428982 ARHGEF40Q8TER5 1519 aa17.52■□□□□ 0.4
SYNGAP1-203ENST00000428982 CASC1Q6TDU7 716 aa17.52■□□□□ 0.4
SYNGAP1-203ENST00000428982 PPRC1Q5VV67 1664 aaKnown RBP17.52■□□□□ 0.4
SYNGAP1-203ENST00000428982 MYRIPQ8NFW9 859 aa17.52■□□□□ 0.39
SYNGAP1-203ENST00000428982 PDZRN3Q9UPQ7 1066 aa17.51■□□□□ 0.39
SYNGAP1-203ENST00000428982 CAMSAP1Q5T5Y3 1602 aa17.51■□□□□ 0.39
SYNGAP1-203ENST00000428982 IRX5P78411 483 aaPredicted RBP17.51■□□□□ 0.39
SYNGAP1-203ENST00000428982 KIF16BQ96L93 1317 aa17.51■□□□□ 0.39
SYNGAP1-203ENST00000428982 DIAPH1O60610 1272 aaKnown RBP17.5■□□□□ 0.39
SYNGAP1-203ENST00000428982 MTHFSP49914 203 aa17.5■□□□□ 0.39
SYNGAP1-203ENST00000428982 GTF2A1P52655 376 aaPredicted RBP17.5■□□□□ 0.39
SYNGAP1-203ENST00000428982 RGS22Q8NE09 1264 aa17.5■□□□□ 0.39
SYNGAP1-203ENST00000428982 PUS7Q96PZ0 661 aaKnown RBP17.5■□□□□ 0.39
SYNGAP1-203ENST00000428982 ESCO1Q5FWF5 840 aa17.49■□□□□ 0.39
SYNGAP1-203ENST00000428982 TBX22Q9Y458 520 aa17.49■□□□□ 0.39
SYNGAP1-203ENST00000428982 SYNMO15061 1565 aa17.49■□□□□ 0.39
SYNGAP1-203ENST00000428982 GAS2L3Q86XJ1 694 aa17.49■□□□□ 0.39
SYNGAP1-203ENST00000428982 RNF214Q8ND24 703 aa17.49■□□□□ 0.39
SYNGAP1-203ENST00000428982 TNPO1Q92973 898 aaKnown RBP17.49■□□□□ 0.39
SYNGAP1-203ENST00000428982 RARSP54136 660 aaKnown RBP17.48■□□□□ 0.39
SYNGAP1-203ENST00000428982 NSD2O96028 1365 aa17.48■□□□□ 0.39
SYNGAP1-203ENST00000428982 ZNF521Q96K83 1311 aa17.48■□□□□ 0.39
SYNGAP1-203ENST00000428982 NLRP1Q9C000 1473 aa17.48■□□□□ 0.39
SYNGAP1-203ENST00000428982 FEZ1Q99689 392 aa17.47■□□□□ 0.39
SYNGAP1-203ENST00000428982 MVPQ14764 893 aaKnown RBP17.47■□□□□ 0.39
SYNGAP1-203ENST00000428982 TSC1Q92574 1164 aa17.47■□□□□ 0.39
SYNGAP1-203ENST00000428982 CIZ1Q9ULV3 898 aaPredicted RBP17.47■□□□□ 0.39
SYNGAP1-203ENST00000428982 ZC3H13Q5T200 1668 aaKnown RBP17.47■□□□□ 0.39
SYNGAP1-203ENST00000428982 RICTORQ6R327 1708 aa17.47■□□□□ 0.39
SYNGAP1-203ENST00000428982 NLRP6P59044 892 aa17.47■□□□□ 0.39
SYNGAP1-203ENST00000428982 MCTP1Q6DN14 999 aa17.47■□□□□ 0.39
SYNGAP1-203ENST00000428982 HSP90B1P14625 803 aaKnown RBP17.46■□□□□ 0.39
SYNGAP1-203ENST00000428982 GABPB1Q06547 395 aaPredicted RBP17.46■□□□□ 0.39
SYNGAP1-203ENST00000428982 LMOD3Q0VAK6 560 aa17.46■□□□□ 0.39
SYNGAP1-203ENST00000428982 ZNF622Q969S3 477 aaKnown RBP eCLIP17.46■□□□□ 0.391e-6■■■■□ 21.4
SYNGAP1-203ENST00000428982 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.46■□□□□ 0.39
SYNGAP1-203ENST00000428982 CCDC27Q2M243 656 aa17.46■□□□□ 0.39
SYNGAP1-203ENST00000428982 TRMT2AQ8IZ69 625 aaKnown RBP17.46■□□□□ 0.39
SYNGAP1-203ENST00000428982 BCL2L13Q9BXK5 485 aa17.46■□□□□ 0.39
SYNGAP1-203ENST00000428982 ANTXR1Q9H6X2 564 aa17.46■□□□□ 0.39
SYNGAP1-203ENST00000428982 DEPDC5O75140 1603 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms