RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 COG3Q96JB2 828 aa23.9■■□□□ 1.42
LMCD1-204ENST00000426878 CARD14Q9BXL6 1004 aa23.9■■□□□ 1.42
LMCD1-204ENST00000426878 BRWD3Q6RI45 1802 aa23.89■■□□□ 1.42
LMCD1-204ENST00000426878 BARGINQ6ZT62 677 aa23.89■■□□□ 1.41
LMCD1-204ENST00000426878 THRAP3Q9Y2W1 955 aaKnown RBP23.88■■□□□ 1.41
LMCD1-204ENST00000426878 CRB1P82279 1406 aa23.87■■□□□ 1.41
LMCD1-204ENST00000426878 THSD7AQ9UPZ6 1657 aa23.87■■□□□ 1.41
LMCD1-204ENST00000426878 C11orf95C9JLR9 678 aaPredicted RBP23.86■■□□□ 1.41
LMCD1-204ENST00000426878 TCP11L2Q8N4U5 519 aa23.86■■□□□ 1.41
LMCD1-204ENST00000426878 WDR17Q8IZU2 1322 aa23.86■■□□□ 1.41
LMCD1-204ENST00000426878 KRT27Q7Z3Y8 459 aa23.85■■□□□ 1.41
LMCD1-204ENST00000426878 NSD3Q9BZ95 1437 aa23.85■■□□□ 1.41
LMCD1-204ENST00000426878 POLR3GLQ9BT43 218 aa23.84■■□□□ 1.41
LMCD1-204ENST00000426878 LTN1O94822 1766 aa23.84■■□□□ 1.41
LMCD1-204ENST00000426878 RGPD5Q99666 1765 aa23.84■■□□□ 1.41
LMCD1-204ENST00000426878 GGNBP2Q9H3C7 697 aa23.84■■□□□ 1.41
LMCD1-204ENST00000426878 USP35Q9P2H5 1018 aa23.84■■□□□ 1.41
LMCD1-204ENST00000426878 A0A0G2JS52 829 aa23.83■■□□□ 1.4
LMCD1-204ENST00000426878 MYT1Q01538 1121 aa23.83■■□□□ 1.4
LMCD1-204ENST00000426878 KIF20BQ96Q89 1820 aa23.82■■□□□ 1.4
LMCD1-204ENST00000426878 TOM1L2Q6ZVM7 507 aa23.81■■□□□ 1.4
LMCD1-204ENST00000426878 CCDC125Q86Z20 511 aa23.8■■□□□ 1.4
LMCD1-204ENST00000426878 IP6K1Q92551 441 aa23.8■■□□□ 1.4
LMCD1-204ENST00000426878 CARD10Q9BWT7 1032 aa23.8■■□□□ 1.4
LMCD1-204ENST00000426878 CGNL1Q0VF96 1302 aa23.8■■□□□ 1.4
LMCD1-204ENST00000426878 BLMP54132 1417 aaPredicted RBP23.79■■□□□ 1.4
LMCD1-204ENST00000426878 ERBB3P21860 1342 aa23.79■■□□□ 1.4
LMCD1-204ENST00000426878 MAP3K19Q56UN5 1328 aa23.78■■□□□ 1.4
LMCD1-204ENST00000426878 CSB-PGBD3P0DP91 1061 aa23.77■■□□□ 1.4
LMCD1-204ENST00000426878 PANK3Q9H999 370 aa23.77■■□□□ 1.4
LMCD1-204ENST00000426878 KIF7Q2M1P5 1343 aa23.77■■□□□ 1.4
LMCD1-204ENST00000426878 FBLN1P23142 703 aa23.76■■□□□ 1.39
LMCD1-204ENST00000426878 PARP4Q9UKK3 1724 aaKnown RBP23.75■■□□□ 1.39
LMCD1-204ENST00000426878 CDCA7Q9BWT1 371 aaPredicted RBP23.75■■□□□ 1.39
LMCD1-204ENST00000426878 CCDC7Q96M83 1385 aa23.75■■□□□ 1.39
LMCD1-204ENST00000426878 ANKRD24Q8TF21 1146 aa23.74■■□□□ 1.39
LMCD1-204ENST00000426878 RTL1A6NKG5 1358 aa23.74■■□□□ 1.39
LMCD1-204ENST00000426878 HOXC9P31274 260 aa23.73■■□□□ 1.39
LMCD1-204ENST00000426878 AMPHP49418 695 aa23.73■■□□□ 1.39
LMCD1-204ENST00000426878 KIF24Q5T7B8 1368 aa23.73■■□□□ 1.39
LMCD1-204ENST00000426878 RRS1Q15050 365 aaKnown RBP23.72■■□□□ 1.39
LMCD1-204ENST00000426878 PDE3BQ13370 1112 aa23.71■■□□□ 1.39
LMCD1-204ENST00000426878 DISP2A7MBM2 1401 aa23.7■■□□□ 1.39
LMCD1-204ENST00000426878 WNK3Q9BYP7 1800 aa23.7■■□□□ 1.39
LMCD1-204ENST00000426878 NLRP2Q9NX02 1062 aa23.69■■□□□ 1.38
LMCD1-204ENST00000426878 NSD2O96028 1365 aa23.69■■□□□ 1.38
LMCD1-204ENST00000426878 FAM196AQ6ZSG2 479 aa23.68■■□□□ 1.38
LMCD1-204ENST00000426878 ANKRD26Q9UPS8 1709 aa23.68■■□□□ 1.38
LMCD1-204ENST00000426878 FAM208AQ9UK61 1670 aaKnown RBP23.68■■□□□ 1.38
LMCD1-204ENST00000426878 FAM182BQ5T319 152 aa23.67■■□□□ 1.38
LMCD1-204ENST00000426878 DDB1Q16531 1140 aa23.67■■□□□ 1.38
LMCD1-204ENST00000426878 LRRC37A3O60309 1634 aa23.67■■□□□ 1.38
LMCD1-204ENST00000426878 FLT4P35916 1363 aa23.66■■□□□ 1.38
LMCD1-204ENST00000426878 WASHC2AQ641Q2 1341 aa23.66■■□□□ 1.38
LMCD1-204ENST00000426878 KNSTRNQ9Y448 316 aa23.66■■□□□ 1.38
LMCD1-204ENST00000426878 INSRP06213 1382 aa23.65■■□□□ 1.38
LMCD1-204ENST00000426878 SF3B2Q13435 895 aaKnown RBP23.64■■□□□ 1.37
LMCD1-204ENST00000426878 LTV1Q96GA3 475 aaPredicted RBP23.64■■□□□ 1.37
LMCD1-204ENST00000426878 PEAK1Q9H792 1746 aa23.64■■□□□ 1.37
LMCD1-204ENST00000426878 PER1O15534 1290 aaPredicted RBP23.62■■□□□ 1.37
LMCD1-204ENST00000426878 IL2RBP14784 551 aa23.62■■□□□ 1.37
LMCD1-204ENST00000426878 HSP90AB2PQ58FF8 381 aa23.62■■□□□ 1.37
LMCD1-204ENST00000426878 EMILIN1Q9Y6C2 1016 aa23.62■■□□□ 1.37
LMCD1-204ENST00000426878 MAP2P11137 1827 aaKnown RBP23.62■■□□□ 1.37
LMCD1-204ENST00000426878 EXOC5O00471 708 aa23.61■■□□□ 1.37
LMCD1-204ENST00000426878 AMER1Q5JTC6 1135 aaPredicted RBP23.61■■□□□ 1.37
LMCD1-204ENST00000426878 POLKQ9UBT6 870 aa23.61■■□□□ 1.37
LMCD1-204ENST00000426878 RGPD1P0DJD0 1748 aa23.61■■□□□ 1.37
LMCD1-204ENST00000426878 OVOS2A0A0G2JMS6 1433 aa23.6■■□□□ 1.37
LMCD1-204ENST00000426878 SMG6Q86US8 1419 aaKnown RBP23.6■■□□□ 1.37
LMCD1-204ENST00000426878 BCL9O00512 1426 aa23.59■■□□□ 1.37
LMCD1-204ENST00000426878 TNS2Q63HR2 1409 aa23.59■■□□□ 1.37
LMCD1-204ENST00000426878 MARCH10Q8NA82 808 aaPredicted RBP23.59■■□□□ 1.37
LMCD1-204ENST00000426878 RGPD2P0DJD1 1756 aa23.57■■□□□ 1.36
LMCD1-204ENST00000426878 NBPF6Q5VWK0 638 aa23.57■■□□□ 1.36
LMCD1-204ENST00000426878 DEFB132Q7Z7B7 95 aa23.57■■□□□ 1.36
LMCD1-204ENST00000426878 MORC1Q86VD1 984 aa23.57■■□□□ 1.36
LMCD1-204ENST00000426878 NBPF4Q96M43 638 aa23.57■■□□□ 1.36
LMCD1-204ENST00000426878 TRIM37O94972 964 aa23.56■■□□□ 1.36
LMCD1-204ENST00000426878 BAG6P46379 1132 aa23.56■■□□□ 1.36
LMCD1-204ENST00000426878 TNS1Q9HBL0 1735 aaKnown RBP23.56■■□□□ 1.36
LMCD1-204ENST00000426878 PPM1GO15355 546 aaPredicted RBP23.55■■□□□ 1.36
LMCD1-204ENST00000426878 TNNT2P45379 298 aaPredicted RBP23.55■■□□□ 1.36
LMCD1-204ENST00000426878 NPC1L1Q9UHC9 1359 aa23.54■■□□□ 1.36
LMCD1-204ENST00000426878 SBF2Q86WG5 1849 aa23.52■■□□□ 1.36
LMCD1-204ENST00000426878 NCAPD2Q15021 1401 aa23.5■■□□□ 1.35
LMCD1-204ENST00000426878 MEGF6O75095 1541 aa23.49■■□□□ 1.35
LMCD1-204ENST00000426878 APBA3O96018 575 aa23.49■■□□□ 1.35
LMCD1-204ENST00000426878 EN1Q05925 392 aaPredicted RBP23.49■■□□□ 1.35
LMCD1-204ENST00000426878 USHBP1Q8N6Y0 703 aa23.48■■□□□ 1.35
LMCD1-204ENST00000426878 RAPGEF4Q8WZA2 1011 aa23.48■■□□□ 1.35
LMCD1-204ENST00000426878 BCL11BQ9C0K0 894 aaPredicted RBP23.48■■□□□ 1.35
LMCD1-204ENST00000426878 PARD3Q8TEW0 1356 aa23.47■■□□□ 1.35
LMCD1-204ENST00000426878 ZCRB1Q8TBF4 217 aaKnown RBP23.47■■□□□ 1.35
LMCD1-204ENST00000426878 CAMKK2Q96RR4 588 aa23.47■■□□□ 1.35
LMCD1-204ENST00000426878 EIF4A2Q14240 407 aaKnown RBP23.46■■□□□ 1.35
LMCD1-204ENST00000426878 EYA1Q99502 592 aa23.46■■□□□ 1.35
LMCD1-204ENST00000426878 TATP17735 454 aaPredicted RBP23.44■■□□□ 1.34
LMCD1-204ENST00000426878 CC2D1BQ5T0F9 858 aaKnown RBP23.44■■□□□ 1.34
LMCD1-204ENST00000426878 DDX54Q8TDD1 881 aaKnown RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms