RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, human

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDGFA-205	ENST00000426681	SPATA31A5	Q5VU36	1347 aa		32.36	■■■□□ 2.77
PDGFA-205	ENST00000426681	SPATA31A7	Q8IWB4	1347 aa		32.36	■■■□□ 2.77
PDGFA-205	ENST00000426681	COL5A2	P05997	1499 aa	Predicted RBP	32.35	■■■□□ 2.77
PDGFA-205	ENST00000426681	STRN4	Q9NRL3	753 aa		32.35	■■■□□ 2.77
PDGFA-205	ENST00000426681	AXIN2	Q9Y2T1	843 aa		32.35	■■■□□ 2.77
PDGFA-205	ENST00000426681	SOCS7	O14512	581 aa		32.34	■■■□□ 2.77
PDGFA-205	ENST00000426681	LTN1	O94822	1766 aa		32.34	■■■□□ 2.77
PDGFA-205	ENST00000426681	ONECUT3	O60422	494 aa	Predicted RBP	32.33	■■■□□ 2.77
PDGFA-205	ENST00000426681	SPATA31A1	Q5TZJ5	1347 aa		32.3	■■■□□ 2.76
PDGFA-205	ENST00000426681	LARP1	Q6PKG0	1096 aa	Known RBP	32.3	■■■□□ 2.76
PDGFA-205	ENST00000426681	RGPD5	Q99666	1765 aa		32.3	■■■□□ 2.76
PDGFA-205	ENST00000426681	MAP3K19	Q56UN5	1328 aa		32.26	■■■□□ 2.75
PDGFA-205	ENST00000426681	NSD2	O96028	1365 aa		32.25	■■■□□ 2.75
PDGFA-205	ENST00000426681	FBLN1	P23142	703 aa		32.25	■■■□□ 2.75
PDGFA-205	ENST00000426681	KNSTRN	Q9Y448	316 aa		32.25	■■■□□ 2.75
PDGFA-205	ENST00000426681	CRB1	P82279	1406 aa		32.25	■■■□□ 2.75
PDGFA-205	ENST00000426681	WDR17	Q8IZU2	1322 aa		32.25	■■■□□ 2.75
PDGFA-205	ENST00000426681	ANKRD26	Q9UPS8	1709 aa		32.24	■■■□□ 2.75
PDGFA-205	ENST00000426681	IP6K1	Q92551	441 aa		32.24	■■■□□ 2.75
PDGFA-205	ENST00000426681	FAM98C	Q17RN3	349 aa	Known RBP	32.23	■■■□□ 2.75
PDGFA-205	ENST00000426681	PER1	O15534	1290 aa	Predicted RBP	32.22	■■■□□ 2.75
PDGFA-205	ENST00000426681	SEPT12	Q8IYM1	358 aa		32.22	■■■□□ 2.75
PDGFA-205	ENST00000426681	BLM	P54132	1417 aa	Predicted RBP	32.22	■■■□□ 2.75
PDGFA-205	ENST00000426681	BARGIN	Q6ZT62	677 aa		32.21	■■■□□ 2.75
PDGFA-205	ENST00000426681	THRAP3	Q9Y2W1	955 aa	Known RBP	32.21	■■■□□ 2.75
PDGFA-205	ENST00000426681	TCP11L2	Q8N4U5	519 aa		32.2	■■■□□ 2.75
PDGFA-205	ENST00000426681	RRS1	Q15050	365 aa	Known RBP	32.19	■■■□□ 2.74
PDGFA-205	ENST00000426681	TOM1L2	Q6ZVM7	507 aa		32.19	■■■□□ 2.74
PDGFA-205	ENST00000426681	USP35	Q9P2H5	1018 aa		32.19	■■■□□ 2.74
PDGFA-205	ENST00000426681	ERBB3	P21860	1342 aa		32.19	■■■□□ 2.74
PDGFA-205	ENST00000426681	RTL1	A6NKG5	1358 aa		32.19	■■■□□ 2.74
PDGFA-205	ENST00000426681	THSD7A	Q9UPZ6	1657 aa		32.18	■■■□□ 2.74
PDGFA-205	ENST00000426681	AMPH	P49418	695 aa		32.18	■■■□□ 2.74
PDGFA-205	ENST00000426681	AMER1	Q5JTC6	1135 aa	Predicted RBP	32.18	■■■□□ 2.74
PDGFA-205	ENST00000426681	KIF24	Q5T7B8	1368 aa		32.18	■■■□□ 2.74
PDGFA-205	ENST00000426681	CSB-PGBD3	P0DP91	1061 aa		32.17	■■■□□ 2.74
PDGFA-205	ENST00000426681	HOXC9	P31274	260 aa		32.17	■■■□□ 2.74
PDGFA-205	ENST00000426681	CARD10	Q9BWT7	1032 aa		32.16	■■■□□ 2.74
PDGFA-205	ENST00000426681	BRWD3	Q6RI45	1802 aa		32.16	■■■□□ 2.74
PDGFA-205	ENST00000426681	ANKRD24	Q8TF21	1146 aa		32.15	■■■□□ 2.74
PDGFA-205	ENST00000426681	MAP2	P11137	1827 aa	Known RBP	32.12	■■■□□ 2.73
PDGFA-205	ENST00000426681		A0A0G2JS52	829 aa		32.11	■■■□□ 2.73
PDGFA-205	ENST00000426681	MYT1	Q01538	1121 aa		32.11	■■■□□ 2.73
PDGFA-205	ENST00000426681	PEAK1	Q9H792	1746 aa		32.11	■■■□□ 2.73
PDGFA-205	ENST00000426681	FLT4	P35916	1363 aa		32.1	■■■□□ 2.73
PDGFA-205	ENST00000426681	MORC1	Q86VD1	984 aa		32.1	■■■□□ 2.73
PDGFA-205	ENST00000426681	NPC1L1	Q9UHC9	1359 aa		32.09	■■■□□ 2.73
PDGFA-205	ENST00000426681	KRT27	Q7Z3Y8	459 aa		32.09	■■■□□ 2.73
PDGFA-205	ENST00000426681	EMILIN1	Q9Y6C2	1016 aa		32.09	■■■□□ 2.73
PDGFA-205	ENST00000426681	FAM208A	Q9UK61	1670 aa	Known RBP	32.08	■■■□□ 2.73
PDGFA-205	ENST00000426681	INSR	P06213	1382 aa		32.08	■■■□□ 2.73
PDGFA-205	ENST00000426681	POLK	Q9UBT6	870 aa		32.08	■■■□□ 2.73
PDGFA-205	ENST00000426681	NLRP2	Q9NX02	1062 aa		32.07	■■■□□ 2.72
PDGFA-205	ENST00000426681	TNNT2	P45379	298 aa	Predicted RBP	32.06	■■■□□ 2.72
PDGFA-205	ENST00000426681	HSP90AB2P	Q58FF8	381 aa		32.06	■■■□□ 2.72
PDGFA-205	ENST00000426681	CDCA7	Q9BWT1	371 aa	Predicted RBP	32.06	■■■□□ 2.72
PDGFA-205	ENST00000426681	LTV1	Q96GA3	475 aa	Predicted RBP	32.05	■■■□□ 2.72
PDGFA-205	ENST00000426681	PARP4	Q9UKK3	1724 aa	Known RBP	32.05	■■■□□ 2.72
PDGFA-205	ENST00000426681	WNK3	Q9BYP7	1800 aa		32.05	■■■□□ 2.72
PDGFA-205	ENST00000426681	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.03	■■■□□ 2.72
PDGFA-205	ENST00000426681	DISP2	A7MBM2	1401 aa		32.02	■■■□□ 2.72
PDGFA-205	ENST00000426681	PPM1G	O15355	546 aa	Predicted RBP	32.01	■■■□□ 2.71
PDGFA-205	ENST00000426681	SMG6	Q86US8	1419 aa	Known RBP	32	■■■□□ 2.71
PDGFA-205	ENST00000426681	CC2D1B	Q5T0F9	858 aa	Known RBP	32	■■■□□ 2.71
PDGFA-205	ENST00000426681	RGPD2	P0DJD1	1756 aa		31.97	■■■□□ 2.71
PDGFA-205	ENST00000426681	PDE3B	Q13370	1112 aa		31.97	■■■□□ 2.71
PDGFA-205	ENST00000426681	LRRC37A3	O60309	1634 aa		31.96	■■■□□ 2.71
PDGFA-205	ENST00000426681	DDB1	Q16531	1140 aa		31.95	■■■□□ 2.71
PDGFA-205	ENST00000426681	NBPF6	Q5VWK0	638 aa		31.95	■■■□□ 2.71
PDGFA-205	ENST00000426681	NBPF4	Q96M43	638 aa		31.95	■■■□□ 2.71
PDGFA-205	ENST00000426681	IL2RB	P14784	551 aa		31.94	■■■□□ 2.7
PDGFA-205	ENST00000426681	EP400	Q96L91	3159 aa		31.93	■■■□□ 2.7
PDGFA-205	ENST00000426681	CCDC125	Q86Z20	511 aa		31.91	■■■□□ 2.7
PDGFA-205	ENST00000426681	EXOC5	O00471	708 aa		31.9	■■■□□ 2.7
PDGFA-205	ENST00000426681	FAM182B	Q5T319	152 aa		31.9	■■■□□ 2.7
PDGFA-205	ENST00000426681	FAM196A	Q6ZSG2	479 aa		31.89	■■■□□ 2.7
PDGFA-205	ENST00000426681	EIF4A2	Q14240	407 aa	Known RBP	31.87	■■■□□ 2.69
PDGFA-205	ENST00000426681	NCAPD2	Q15021	1401 aa		31.86	■■■□□ 2.69
PDGFA-205	ENST00000426681	TNS2	Q63HR2	1409 aa		31.86	■■■□□ 2.69
PDGFA-205	ENST00000426681	MTHFS	P49914	203 aa		31.85	■■■□□ 2.69
PDGFA-205	ENST00000426681	DDX10	Q13206	875 aa	Known RBP	31.84	■■■□□ 2.69
PDGFA-205	ENST00000426681	CNGB1	Q14028	1251 aa	Predicted RBP	31.84	■■■□□ 2.69
PDGFA-205	ENST00000426681	USHBP1	Q8N6Y0	703 aa		31.84	■■■□□ 2.69
PDGFA-205	ENST00000426681	EYA1	Q99502	592 aa		31.84	■■■□□ 2.69
PDGFA-205	ENST00000426681	MARCH10	Q8NA82	808 aa	Predicted RBP	31.83	■■■□□ 2.69
PDGFA-205	ENST00000426681	OVOS2	A0A0G2JMS6	1433 aa		31.82	■■■□□ 2.68
PDGFA-205	ENST00000426681	MEGF6	O75095	1541 aa		31.81	■■■□□ 2.68
PDGFA-205	ENST00000426681	BCL9	O00512	1426 aa		31.81	■■■□□ 2.68
PDGFA-205	ENST00000426681	RAPGEF4	Q8WZA2	1011 aa		31.8	■■■□□ 2.68
PDGFA-205	ENST00000426681	IGSF1	Q8N6C5	1336 aa		31.76	■■■□□ 2.68
PDGFA-205	ENST00000426681	RGPD1	P0DJD0	1748 aa		31.76	■■■□□ 2.67
PDGFA-205	ENST00000426681	TAT	P17735	454 aa	Predicted RBP	31.76	■■■□□ 2.67
PDGFA-205	ENST00000426681	IL13	P35225	146 aa		31.76	■■■□□ 2.67
PDGFA-205	ENST00000426681	ZCRB1	Q8TBF4	217 aa	Known RBP	31.75	■■■□□ 2.67
PDGFA-205	ENST00000426681	SF3B2	Q13435	895 aa	Known RBP	31.74	■■■□□ 2.67
PDGFA-205	ENST00000426681	TRIM37	O94972	964 aa		31.73	■■■□□ 2.67
PDGFA-205	ENST00000426681	SBF2	Q86WG5	1849 aa		31.72	■■■□□ 2.67
PDGFA-205	ENST00000426681	PARD3	Q8TEW0	1356 aa		31.72	■■■□□ 2.67
PDGFA-205	ENST00000426681	ZNF316	A6NFI3	1004 aa	Predicted RBP	31.72	■■■□□ 2.67
PDGFA-205	ENST00000426681	PPP2R1A	P30153	589 aa		31.72	■■■□□ 2.67

Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms